RNA–Protein interactions for RNA: ENST00000587027.1

UBN1-206, Transcript of ubinuclein 1, humanhuman

TSL 3

Gene UBN1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBN1-206ENST00000587027 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.85
UBN1-206ENST00000587027 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
UBN1-206ENST00000587027 ABCC9O60706 1549 aa28.32■■■□□ 2.12
UBN1-206ENST00000587027 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
UBN1-206ENST00000587027 NACADO15069 1562 aa27.35■■□□□ 1.97
UBN1-206ENST00000587027 RB1CC1Q8TDY2 1594 aa27.33■■□□□ 1.97
UBN1-206ENST00000587027 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
UBN1-206ENST00000587027 MYO15BQ96JP2 1530 aa27.28■■□□□ 1.96
UBN1-206ENST00000587027 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
UBN1-206ENST00000587027 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
UBN1-206ENST00000587027 SCRIBQ14160 1630 aa26.53■■□□□ 1.84
UBN1-206ENST00000587027 PABPN1Q86U42 306 aaKnown RBP eCLIP26.5■■□□□ 1.83
UBN1-206ENST00000587027 BICRAQ9NZM4 1560 aa26.5■■□□□ 1.83
UBN1-206ENST00000587027 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
UBN1-206ENST00000587027 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
UBN1-206ENST00000587027 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
UBN1-206ENST00000587027 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
UBN1-206ENST00000587027 CECR2Q9BXF3 1484 aa25.53■■□□□ 1.68
UBN1-206ENST00000587027 BAZ1AQ9NRL2 1556 aaPredicted RBP25.43■■□□□ 1.66
UBN1-206ENST00000587027 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
UBN1-206ENST00000587027 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
UBN1-206ENST00000587027 ATAD2BQ9ULI0 1458 aa25.27■■□□□ 1.64
UBN1-206ENST00000587027 NCAPD3P42695 1498 aa25.26■■□□□ 1.63
UBN1-206ENST00000587027 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
UBN1-206ENST00000587027 PEG3Q9GZU2 1588 aa25.2■■□□□ 1.62
UBN1-206ENST00000587027 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
UBN1-206ENST00000587027 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
UBN1-206ENST00000587027 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
UBN1-206ENST00000587027 WIZO95785 1651 aa24.98■■□□□ 1.59
UBN1-206ENST00000587027 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
UBN1-206ENST00000587027 NESP48681 1621 aa24.54■■□□□ 1.52
UBN1-206ENST00000587027 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
UBN1-206ENST00000587027 CADPSQ9ULU8 1353 aa24.53■■□□□ 1.52
UBN1-206ENST00000587027 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
UBN1-206ENST00000587027 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
UBN1-206ENST00000587027 CFTRP13569 1480 aa24.41■■□□□ 1.5
UBN1-206ENST00000587027 ERCC6Q03468 1493 aa24.41■■□□□ 1.5
UBN1-206ENST00000587027 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
UBN1-206ENST00000587027 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
UBN1-206ENST00000587027 FANCD2Q9BXW9 1451 aa24.21■■□□□ 1.47
UBN1-206ENST00000587027 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
UBN1-206ENST00000587027 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
UBN1-206ENST00000587027 CUX2O14529 1486 aa24.14■■□□□ 1.46
UBN1-206ENST00000587027 THOC2Q8NI27 1593 aaKnown RBP24.14■■□□□ 1.45
UBN1-206ENST00000587027 MRC2Q9UBG0 1479 aa24.11■■□□□ 1.45
UBN1-206ENST00000587027 WDR62O43379 1518 aa24.02■■□□□ 1.44
UBN1-206ENST00000587027 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.43
UBN1-206ENST00000587027 ABCC8Q09428 1581 aa23.89■■□□□ 1.41
UBN1-206ENST00000587027 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
UBN1-206ENST00000587027 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
UBN1-206ENST00000587027 CUX1P39880 1505 aa23.71■■□□□ 1.39
UBN1-206ENST00000587027 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
UBN1-206ENST00000587027 POLA1P09884 1462 aaPredicted RBP23.64■■□□□ 1.38
UBN1-206ENST00000587027 WRNQ14191 1432 aaPredicted RBP eCLIP23.62■■□□□ 1.37
UBN1-206ENST00000587027 FGD5Q6ZNL6 1462 aa23.6■■□□□ 1.37
UBN1-206ENST00000587027 SOGA1O94964 1423 aa23.57■■□□□ 1.36
UBN1-206ENST00000587027 TARBP1Q13395 1621 aaKnown RBP23.56■■□□□ 1.36
UBN1-206ENST00000587027 TOP2BQ02880 1626 aa23.55■■□□□ 1.36
UBN1-206ENST00000587027 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
UBN1-206ENST00000587027 RAD54L2Q9Y4B4 1467 aa23.53■■□□□ 1.36
UBN1-206ENST00000587027 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
UBN1-206ENST00000587027 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
UBN1-206ENST00000587027 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
UBN1-206ENST00000587027 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
UBN1-206ENST00000587027 AQRO60306 1485 aaKnown RBP eCLIP23.42■■□□□ 1.347e-7■■■□□ 17.7
UBN1-206ENST00000587027 ABCA10Q8WWZ4 1543 aa23.41■■□□□ 1.34
UBN1-206ENST00000587027 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
UBN1-206ENST00000587027 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
UBN1-206ENST00000587027 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
UBN1-206ENST00000587027 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
UBN1-206ENST00000587027 DNAJC5Q9H3Z4 198 aa23.26■■□□□ 1.31
UBN1-206ENST00000587027 MAGI1Q96QZ7 1491 aaPredicted RBP23.21■■□□□ 1.31
UBN1-206ENST00000587027 SNAPC4Q5SXM2 1469 aa23.2■■□□□ 1.3
UBN1-206ENST00000587027 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
UBN1-206ENST00000587027 PBRM1Q86U86 1689 aa23.18■■□□□ 1.3
UBN1-206ENST00000587027 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
UBN1-206ENST00000587027 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
UBN1-206ENST00000587027 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
UBN1-206ENST00000587027 SYNJ2O15056 1496 aa23.11■■□□□ 1.29
UBN1-206ENST00000587027 FBLN2P98095 1184 aa23.09■■□□□ 1.29
UBN1-206ENST00000587027 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
UBN1-206ENST00000587027 CHD1O14646 1710 aa23.08■■□□□ 1.28
UBN1-206ENST00000587027 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
UBN1-206ENST00000587027 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
UBN1-206ENST00000587027 IGF1RP08069 1367 aa23.03■■□□□ 1.28
UBN1-206ENST00000587027 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
UBN1-206ENST00000587027 GRIN2AQ12879 1464 aa22.97■■□□□ 1.27
UBN1-206ENST00000587027 RUSC2Q8N2Y8 1516 aa22.92■■□□□ 1.26
UBN1-206ENST00000587027 CUL7Q14999 1698 aa22.92■■□□□ 1.26
UBN1-206ENST00000587027 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.26
UBN1-206ENST00000587027 CLASP1Q7Z460 1538 aa22.88■■□□□ 1.25
UBN1-206ENST00000587027 NUP160Q12769 1436 aa22.88■■□□□ 1.25
UBN1-206ENST00000587027 CEP170Q5SW79 1584 aa22.82■■□□□ 1.24
UBN1-206ENST00000587027 EEA1Q15075 1411 aa22.81■■□□□ 1.24
UBN1-206ENST00000587027 RAPGEF2Q9Y4G8 1499 aa22.76■■□□□ 1.23
UBN1-206ENST00000587027 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
UBN1-206ENST00000587027 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
UBN1-206ENST00000587027 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
UBN1-206ENST00000587027 RIMBP3CA6NJZ7 1639 aa22.72■■□□□ 1.23
UBN1-206ENST00000587027 RIMBP3BA6NNM3 1639 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms