RNA–Protein interactions for RNA: ENST00000586912.1

CCNE1-207, Transcript of cyclin E1, humanhuman

TSL 5

Gene CCNE1, Length 415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-207ENST00000586912 NISCHQ9Y2I1 1504 aa40.44■■■■■ 4.06
CCNE1-207ENST00000586912 CCDC180Q9P1Z9 1646 aa35.87■■■■□ 3.33
CCNE1-207ENST00000586912 ABCC9O60706 1549 aa35.45■■■■□ 3.27
CCNE1-207ENST00000586912 DCAF8L2P0C7V8 631 aa33.99■■■■□ 3.03
CCNE1-207ENST00000586912 RB1CC1Q8TDY2 1594 aa33.9■■■■□ 3.02
CCNE1-207ENST00000586912 NACADO15069 1562 aa33.84■■■■□ 3.01
CCNE1-207ENST00000586912 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
CCNE1-207ENST00000586912 MYO15BQ96JP2 1530 aa33.57■■■□□ 2.96
CCNE1-207ENST00000586912 DCAF1Q9Y4B6 1507 aa33.38■■■□□ 2.93
CCNE1-207ENST00000586912 PABPN1Q86U42 306 aaKnown RBP eCLIP33.2■■■□□ 2.91
CCNE1-207ENST00000586912 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
CCNE1-207ENST00000586912 BICRAQ9NZM4 1560 aa32.97■■■□□ 2.87
CCNE1-207ENST00000586912 SCRIBQ14160 1630 aa32.84■■■□□ 2.85
CCNE1-207ENST00000586912 DNAJC5BQ9UF47 199 aa32.84■■■□□ 2.85
CCNE1-207ENST00000586912 SHROOM4Q9ULL8 1493 aa32.46■■■□□ 2.79
CCNE1-207ENST00000586912 EIF4G1Q04637 1599 aaKnown RBP32.08■■■□□ 2.73
CCNE1-207ENST00000586912 CC2D2AQ9P2K1 1620 aa32■■■□□ 2.71
CCNE1-207ENST00000586912 CECR2Q9BXF3 1484 aa31.84■■■□□ 2.69
CCNE1-207ENST00000586912 SMARCA4P51532 1647 aa31.37■■■□□ 2.61
CCNE1-207ENST00000586912 ATAD2BQ9ULI0 1458 aa31.32■■■□□ 2.6
CCNE1-207ENST00000586912 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
CCNE1-207ENST00000586912 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
CCNE1-207ENST00000586912 MROH2BQ7Z745 1585 aa31.21■■■□□ 2.59
CCNE1-207ENST00000586912 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
CCNE1-207ENST00000586912 PEG3Q9GZU2 1588 aa31.05■■■□□ 2.56
CCNE1-207ENST00000586912 HMGXB3Q12766 1538 aa31.05■■■□□ 2.56
CCNE1-207ENST00000586912 BAZ1BQ9UIG0 1483 aaKnown RBP31■■■□□ 2.55
CCNE1-207ENST00000586912 WIZO95785 1651 aa30.82■■■□□ 2.52
CCNE1-207ENST00000586912 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
CCNE1-207ENST00000586912 NESP48681 1621 aa30.65■■■□□ 2.5
CCNE1-207ENST00000586912 ERCC6Q03468 1493 aa30.5■■■□□ 2.47
CCNE1-207ENST00000586912 TOP2AP11388 1531 aaKnown RBP30.44■■■□□ 2.46
CCNE1-207ENST00000586912 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
CCNE1-207ENST00000586912 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
CCNE1-207ENST00000586912 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
CCNE1-207ENST00000586912 CUX2O14529 1486 aa30.2■■■□□ 2.43
CCNE1-207ENST00000586912 CCDC88BA6NC98 1476 aa30.19■■■□□ 2.42
CCNE1-207ENST00000586912 CFTRP13569 1480 aa30.17■■■□□ 2.42
CCNE1-207ENST00000586912 KIF21AQ7Z4S6 1674 aa30.16■■■□□ 2.42
CCNE1-207ENST00000586912 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
CCNE1-207ENST00000586912 FANCD2Q9BXW9 1451 aa30.03■■■□□ 2.4
CCNE1-207ENST00000586912 SUPT5HO00267 1087 aaKnown RBP29.98■■■□□ 2.39
CCNE1-207ENST00000586912 MRC2Q9UBG0 1479 aa29.97■■■□□ 2.39
CCNE1-207ENST00000586912 CEP164Q9UPV0 1460 aa29.96■■■□□ 2.39
CCNE1-207ENST00000586912 WDR62O43379 1518 aa29.86■■■□□ 2.37
CCNE1-207ENST00000586912 URB2Q14146 1524 aaKnown RBP29.76■■■□□ 2.36
CCNE1-207ENST00000586912 PRDM2Q13029 1718 aa29.73■■■□□ 2.35
CCNE1-207ENST00000586912 DNAJC5Q9H3Z4 198 aa29.6■■■□□ 2.33
CCNE1-207ENST00000586912 TOPBP1Q92547 1522 aa29.53■■■□□ 2.32
CCNE1-207ENST00000586912 ABCC8Q09428 1581 aa29.44■■■□□ 2.3
CCNE1-207ENST00000586912 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
CCNE1-207ENST00000586912 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
CCNE1-207ENST00000586912 ZNF608Q9ULD9 1512 aaPredicted RBP29.32■■■□□ 2.28
CCNE1-207ENST00000586912 POLA1P09884 1462 aaPredicted RBP29.28■■■□□ 2.28
CCNE1-207ENST00000586912 CUX1P39880 1505 aa29.27■■■□□ 2.28
CCNE1-207ENST00000586912 RAD54L2Q9Y4B4 1467 aa29.22■■■□□ 2.27
CCNE1-207ENST00000586912 TARBP1Q13395 1621 aaKnown RBP29.19■■■□□ 2.26
CCNE1-207ENST00000586912 SOGA1O94964 1423 aa29.19■■■□□ 2.26
CCNE1-207ENST00000586912 FGD5Q6ZNL6 1462 aa29.17■■■□□ 2.26
CCNE1-207ENST00000586912 AQRO60306 1485 aaKnown RBP eCLIP29.15■■■□□ 2.26
CCNE1-207ENST00000586912 TDRD9Q8NDG6 1382 aaKnown RBP29.08■■■□□ 2.25
CCNE1-207ENST00000586912 EIF4G3O43432 1585 aaKnown RBP29.08■■■□□ 2.25
CCNE1-207ENST00000586912 OSCARQ8IYS5 282 aa29.03■■■□□ 2.24
CCNE1-207ENST00000586912 WRNQ14191 1432 aaPredicted RBP eCLIP29.01■■■□□ 2.23
CCNE1-207ENST00000586912 SYNJ1O43426 1573 aa28.94■■■□□ 2.22
CCNE1-207ENST00000586912 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
CCNE1-207ENST00000586912 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
CCNE1-207ENST00000586912 ABCA10Q8WWZ4 1543 aa28.87■■■□□ 2.21
CCNE1-207ENST00000586912 WDR97A6NE52 1622 aa28.84■■■□□ 2.21
CCNE1-207ENST00000586912 FBLN2P98095 1184 aa28.84■■■□□ 2.21
CCNE1-207ENST00000586912 GAPVD1Q14C86 1478 aa28.81■■■□□ 2.2
CCNE1-207ENST00000586912 SNAPC4Q5SXM2 1469 aa28.81■■■□□ 2.2
CCNE1-207ENST00000586912 GRIN2BQ13224 1484 aa28.8■■■□□ 2.2
CCNE1-207ENST00000586912 ABCA5Q8WWZ7 1642 aa28.72■■■□□ 2.19
CCNE1-207ENST00000586912 MAGI1Q96QZ7 1491 aaPredicted RBP28.72■■■□□ 2.19
CCNE1-207ENST00000586912 CHD1O14646 1710 aa28.72■■■□□ 2.19
CCNE1-207ENST00000586912 CHMP7Q8WUX9 453 aaPredicted RBP28.7■■■□□ 2.18
CCNE1-207ENST00000586912 PBRM1Q86U86 1689 aa28.65■■■□□ 2.18
CCNE1-207ENST00000586912 SYNJ2O15056 1496 aa28.63■■■□□ 2.17
CCNE1-207ENST00000586912 TRIM41Q8WV44 630 aa28.59■■■□□ 2.17
CCNE1-207ENST00000586912 ARHGEF11O15085 1522 aa28.5■■■□□ 2.15
CCNE1-207ENST00000586912 RIMBP3CA6NJZ7 1639 aa28.5■■■□□ 2.15
CCNE1-207ENST00000586912 RIMBP3BA6NNM3 1639 aa28.5■■■□□ 2.15
CCNE1-207ENST00000586912 RIMBP3Q9UFD9 1639 aa28.5■■■□□ 2.15
CCNE1-207ENST00000586912 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
CCNE1-207ENST00000586912 ADAMTS12P58397 1594 aa28.46■■■□□ 2.15
CCNE1-207ENST00000586912 FHAD1B1AJZ9 1412 aa28.46■■■□□ 2.15
CCNE1-207ENST00000586912 CLASP1Q7Z460 1538 aa28.46■■■□□ 2.15
CCNE1-207ENST00000586912 GRIN2AQ12879 1464 aa28.44■■■□□ 2.14
CCNE1-207ENST00000586912 IGF1RP08069 1367 aa28.4■■■□□ 2.14
CCNE1-207ENST00000586912 KIF27Q86VH2 1401 aa28.4■■■□□ 2.14
CCNE1-207ENST00000586912 CYB5RLQ6IPT4 315 aa28.36■■■□□ 2.13
CCNE1-207ENST00000586912 NUP160Q12769 1436 aa28.34■■■□□ 2.13
CCNE1-207ENST00000586912 CEP170Q5SW79 1584 aa28.31■■■□□ 2.12
CCNE1-207ENST00000586912 ARAP1Q96P48 1450 aa28.29■■■□□ 2.12
CCNE1-207ENST00000586912 RUSC2Q8N2Y8 1516 aa28.22■■■□□ 2.11
CCNE1-207ENST00000586912 CARMIL1Q5VZK9 1371 aa28.19■■■□□ 2.1
CCNE1-207ENST00000586912 ERCC6L2Q5T890 1561 aa28.14■■■□□ 2.1
CCNE1-207ENST00000586912 CUL7Q14999 1698 aa28.13■■■□□ 2.09
CCNE1-207ENST00000586912 JPH4Q96JJ6 628 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms