RNA–Protein interactions for RNA: ENST00000586799.1

DNMT1-209, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-209ENST00000586799 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
DNMT1-209ENST00000586799 ABCC9O60706 1549 aa27.92■■■□□ 2.06
DNMT1-209ENST00000586799 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
DNMT1-209ENST00000586799 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
DNMT1-209ENST00000586799 RB1CC1Q8TDY2 1594 aa26.28■■□□□ 1.8
DNMT1-209ENST00000586799 NACADO15069 1562 aa25.95■■□□□ 1.75
DNMT1-209ENST00000586799 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
DNMT1-209ENST00000586799 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
DNMT1-209ENST00000586799 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
DNMT1-209ENST00000586799 BICRAQ9NZM4 1560 aa25.57■■□□□ 1.68
DNMT1-209ENST00000586799 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
DNMT1-209ENST00000586799 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
DNMT1-209ENST00000586799 CC2D2AQ9P2K1 1620 aa25.18■■□□□ 1.62
DNMT1-209ENST00000586799 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
DNMT1-209ENST00000586799 DNAJC5Q9H3Z4 198 aa25.04■■□□□ 1.6
DNMT1-209ENST00000586799 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
DNMT1-209ENST00000586799 DCAF1Q9Y4B6 1507 aa24.85■■□□□ 1.57
DNMT1-209ENST00000586799 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
DNMT1-209ENST00000586799 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
DNMT1-209ENST00000586799 CUX2O14529 1486 aa24.3■■□□□ 1.48
DNMT1-209ENST00000586799 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
DNMT1-209ENST00000586799 NCAPD3P42695 1498 aa23.99■■□□□ 1.43
DNMT1-209ENST00000586799 NESP48681 1621 aa23.82■■□□□ 1.4
DNMT1-209ENST00000586799 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
DNMT1-209ENST00000586799 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
DNMT1-209ENST00000586799 SMARCA2P51531 1590 aa23.7■■□□□ 1.38
DNMT1-209ENST00000586799 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
DNMT1-209ENST00000586799 TRIM41Q8WV44 630 aa23.66■■□□□ 1.38
DNMT1-209ENST00000586799 SMARCA4P51532 1647 aa23.63■■□□□ 1.37
DNMT1-209ENST00000586799 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
DNMT1-209ENST00000586799 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
DNMT1-209ENST00000586799 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
DNMT1-209ENST00000586799 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
DNMT1-209ENST00000586799 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
DNMT1-209ENST00000586799 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
DNMT1-209ENST00000586799 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
DNMT1-209ENST00000586799 CADPSQ9ULU8 1353 aa23.23■■□□□ 1.31
DNMT1-209ENST00000586799 MROH2BQ7Z745 1585 aa23.23■■□□□ 1.31
DNMT1-209ENST00000586799 WDR62O43379 1518 aa23.21■■□□□ 1.31
DNMT1-209ENST00000586799 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
DNMT1-209ENST00000586799 CEP164Q9UPV0 1460 aa23.03■■□□□ 1.28
DNMT1-209ENST00000586799 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
DNMT1-209ENST00000586799 WIZO95785 1651 aa22.91■■□□□ 1.26
DNMT1-209ENST00000586799 RIMBP3CA6NJZ7 1639 aa22.87■■□□□ 1.25
DNMT1-209ENST00000586799 RIMBP3BA6NNM3 1639 aa22.87■■□□□ 1.25
DNMT1-209ENST00000586799 RIMBP3Q9UFD9 1639 aa22.87■■□□□ 1.25
DNMT1-209ENST00000586799 CFTRP13569 1480 aa22.83■■□□□ 1.25
DNMT1-209ENST00000586799 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
DNMT1-209ENST00000586799 ARHGEF11O15085 1522 aa22.72■■□□□ 1.23
DNMT1-209ENST00000586799 ZNF608Q9ULD9 1512 aaPredicted RBP22.64■■□□□ 1.21
DNMT1-209ENST00000586799 CYB5RLQ6IPT4 315 aa22.62■■□□□ 1.21
DNMT1-209ENST00000586799 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
DNMT1-209ENST00000586799 TRHP20396 242 aaPredicted RBP22.56■■□□□ 1.2
DNMT1-209ENST00000586799 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
DNMT1-209ENST00000586799 PRDM2Q13029 1718 aa22.53■■□□□ 1.2
DNMT1-209ENST00000586799 RSF1Q96T23 1441 aaPredicted RBP22.52■■□□□ 1.2
DNMT1-209ENST00000586799 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
DNMT1-209ENST00000586799 TOPBP1Q92547 1522 aa22.46■■□□□ 1.19
DNMT1-209ENST00000586799 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
DNMT1-209ENST00000586799 CHD1O14646 1710 aa22.43■■□□□ 1.18
DNMT1-209ENST00000586799 AQRO60306 1485 aaKnown RBP eCLIP22.36■■□□□ 1.172e-19■■□□□ 12.1
DNMT1-209ENST00000586799 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
DNMT1-209ENST00000586799 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
DNMT1-209ENST00000586799 FBLN2P98095 1184 aa22.34■■□□□ 1.17
DNMT1-209ENST00000586799 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
DNMT1-209ENST00000586799 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
DNMT1-209ENST00000586799 DNMBPQ6XZF7 1577 aa22.3■■□□□ 1.16
DNMT1-209ENST00000586799 POLA1P09884 1462 aaPredicted RBP22.18■■□□□ 1.14
DNMT1-209ENST00000586799 CLASP1Q7Z460 1538 aa22.15■■□□□ 1.14
DNMT1-209ENST00000586799 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
DNMT1-209ENST00000586799 RAD54L2Q9Y4B4 1467 aa22.13■■□□□ 1.13
DNMT1-209ENST00000586799 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
DNMT1-209ENST00000586799 SOGA1O94964 1423 aa22.08■■□□□ 1.13
DNMT1-209ENST00000586799 CHMP7Q8WUX9 453 aaPredicted RBP22.07■■□□□ 1.12
DNMT1-209ENST00000586799 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
DNMT1-209ENST00000586799 WDR97A6NE52 1622 aa22.01■■□□□ 1.11
DNMT1-209ENST00000586799 MAGI1Q96QZ7 1491 aaPredicted RBP22.01■■□□□ 1.11
DNMT1-209ENST00000586799 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
DNMT1-209ENST00000586799 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
DNMT1-209ENST00000586799 SYNJ2O15056 1496 aa21.95■■□□□ 1.1
DNMT1-209ENST00000586799 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
DNMT1-209ENST00000586799 CUX1P39880 1505 aa21.85■■□□□ 1.09
DNMT1-209ENST00000586799 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
DNMT1-209ENST00000586799 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
DNMT1-209ENST00000586799 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
DNMT1-209ENST00000586799 CEP170Q5SW79 1584 aa21.67■■□□□ 1.06
DNMT1-209ENST00000586799 ABCA10Q8WWZ4 1543 aa21.67■■□□□ 1.06
DNMT1-209ENST00000586799 KIF13AQ9H1H9 1805 aa21.66■■□□□ 1.06
DNMT1-209ENST00000586799 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
DNMT1-209ENST00000586799 NUP160Q12769 1436 aa21.63■■□□□ 1.05
DNMT1-209ENST00000586799 SHROOM2Q13796 1616 aa21.6■■□□□ 1.05
DNMT1-209ENST00000586799 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
DNMT1-209ENST00000586799 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
DNMT1-209ENST00000586799 FAM69CQ0P6D2 419 aa21.49■■□□□ 1.03
DNMT1-209ENST00000586799 PRG4Q92954 1404 aaPredicted RBP21.47■■□□□ 1.03
DNMT1-209ENST00000586799 ABCC10Q5T3U5 1492 aa21.47■■□□□ 1.03
DNMT1-209ENST00000586799 KDM4FA0A1W2PPD8 638 aa21.47■■□□□ 1.03
DNMT1-209ENST00000586799 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
DNMT1-209ENST00000586799 ILDR1Q86SU0 546 aaPredicted RBP21.46■■□□□ 1.03
DNMT1-209ENST00000586799 JPH4Q96JJ6 628 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms