RNA–Protein interactions for RNA: ENST00000586546.5

HDHD2-202, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

TSL 4

Gene HDHD2, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-202ENST00000586546 NISCHQ9Y2I1 1504 aa37.97■■■■□ 3.67
HDHD2-202ENST00000586546 CCDC180Q9P1Z9 1646 aa33.55■■■□□ 2.96
HDHD2-202ENST00000586546 ABCC9O60706 1549 aa32.66■■■□□ 2.82
HDHD2-202ENST00000586546 ZCCHC6Q5VYS8 1495 aaKnown RBP31.68■■■□□ 2.66
HDHD2-202ENST00000586546 DCAF8L2P0C7V8 631 aa31.54■■■□□ 2.64
HDHD2-202ENST00000586546 NACADO15069 1562 aa31.51■■■□□ 2.63
HDHD2-202ENST00000586546 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
HDHD2-202ENST00000586546 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
HDHD2-202ENST00000586546 RB1CC1Q8TDY2 1594 aa31.42■■■□□ 2.62
HDHD2-202ENST00000586546 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
HDHD2-202ENST00000586546 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
HDHD2-202ENST00000586546 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
HDHD2-202ENST00000586546 DNAJC5BQ9UF47 199 aa30.44■■■□□ 2.46
HDHD2-202ENST00000586546 PABPN1Q86U42 306 aaKnown RBP eCLIP30.43■■■□□ 2.46
HDHD2-202ENST00000586546 SHROOM4Q9ULL8 1493 aa30.22■■■□□ 2.43
HDHD2-202ENST00000586546 EIF4G1Q04637 1599 aaKnown RBP29.61■■■□□ 2.33
HDHD2-202ENST00000586546 CC2D2AQ9P2K1 1620 aa29.54■■■□□ 2.32
HDHD2-202ENST00000586546 CECR2Q9BXF3 1484 aa29.52■■■□□ 2.32
HDHD2-202ENST00000586546 BAZ1AQ9NRL2 1556 aaPredicted RBP29.39■■■□□ 2.29
HDHD2-202ENST00000586546 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
HDHD2-202ENST00000586546 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
HDHD2-202ENST00000586546 ATAD2BQ9ULI0 1458 aa29.13■■■□□ 2.25
HDHD2-202ENST00000586546 NCAPD3P42695 1498 aa29.1■■■□□ 2.25
HDHD2-202ENST00000586546 SMARCA2P51531 1590 aa29.1■■■□□ 2.25
HDHD2-202ENST00000586546 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
HDHD2-202ENST00000586546 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
HDHD2-202ENST00000586546 HMGXB3Q12766 1538 aa28.94■■■□□ 2.22
HDHD2-202ENST00000586546 WIZO95785 1651 aa28.91■■■□□ 2.22
HDHD2-202ENST00000586546 BAZ1BQ9UIG0 1483 aaKnown RBP28.88■■■□□ 2.21
HDHD2-202ENST00000586546 TOP2AP11388 1531 aaKnown RBP28.65■■■□□ 2.18
HDHD2-202ENST00000586546 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
HDHD2-202ENST00000586546 CCDC88BA6NC98 1476 aa28.35■■■□□ 2.13
HDHD2-202ENST00000586546 CADPSQ9ULU8 1353 aa28.26■■■□□ 2.12
HDHD2-202ENST00000586546 ERCC6Q03468 1493 aa28.25■■■□□ 2.11
HDHD2-202ENST00000586546 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
HDHD2-202ENST00000586546 NESP48681 1621 aa28.2■■■□□ 2.1
HDHD2-202ENST00000586546 CFTRP13569 1480 aa28.16■■■□□ 2.1
HDHD2-202ENST00000586546 CUX2O14529 1486 aa28.13■■■□□ 2.09
HDHD2-202ENST00000586546 PDS5BQ9NTI5 1447 aa28.05■■■□□ 2.08
HDHD2-202ENST00000586546 DNAJC5Q9H3Z4 198 aa27.96■■■□□ 2.07
HDHD2-202ENST00000586546 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.06
HDHD2-202ENST00000586546 PRDM2Q13029 1718 aa27.87■■■□□ 2.05
HDHD2-202ENST00000586546 KIF21AQ7Z4S6 1674 aa27.84■■■□□ 2.05
HDHD2-202ENST00000586546 THOC2Q8NI27 1593 aaKnown RBP27.83■■■□□ 2.05
HDHD2-202ENST00000586546 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
HDHD2-202ENST00000586546 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.02
HDHD2-202ENST00000586546 WDR62O43379 1518 aa27.6■■■□□ 2.01
HDHD2-202ENST00000586546 URB2Q14146 1524 aaKnown RBP27.58■■■□□ 2.01
HDHD2-202ENST00000586546 ABCC8Q09428 1581 aa27.56■■■□□ 2
HDHD2-202ENST00000586546 TOPBP1Q92547 1522 aa27.48■■□□□ 1.99
HDHD2-202ENST00000586546 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
HDHD2-202ENST00000586546 CUX1P39880 1505 aa27.41■■□□□ 1.98
HDHD2-202ENST00000586546 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
HDHD2-202ENST00000586546 TOP2BQ02880 1626 aa27.28■■□□□ 1.96
HDHD2-202ENST00000586546 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
HDHD2-202ENST00000586546 SYNJ1O43426 1573 aa27.26■■□□□ 1.95
HDHD2-202ENST00000586546 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
HDHD2-202ENST00000586546 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
HDHD2-202ENST00000586546 IFT140Q96RY7 1462 aa27.24■■□□□ 1.95
HDHD2-202ENST00000586546 SOGA1O94964 1423 aa27.2■■□□□ 1.94
HDHD2-202ENST00000586546 TARBP1Q13395 1621 aaKnown RBP27.16■■□□□ 1.94
HDHD2-202ENST00000586546 RAD54L2Q9Y4B4 1467 aa27.14■■□□□ 1.94
HDHD2-202ENST00000586546 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
HDHD2-202ENST00000586546 ABCA10Q8WWZ4 1543 aa27.04■■□□□ 1.92
HDHD2-202ENST00000586546 TRIM41Q8WV44 630 aa27.01■■□□□ 1.91
HDHD2-202ENST00000586546 TDRD9Q8NDG6 1382 aaKnown RBP26.98■■□□□ 1.91
HDHD2-202ENST00000586546 WDR97A6NE52 1622 aa26.98■■□□□ 1.91
HDHD2-202ENST00000586546 AQRO60306 1485 aaKnown RBP eCLIP26.97■■□□□ 1.91
HDHD2-202ENST00000586546 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
HDHD2-202ENST00000586546 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
HDHD2-202ENST00000586546 GAPVD1Q14C86 1478 aa26.87■■□□□ 1.89
HDHD2-202ENST00000586546 ABCA5Q8WWZ7 1642 aa26.86■■□□□ 1.89
HDHD2-202ENST00000586546 GRIN2BQ13224 1484 aa26.83■■□□□ 1.89
HDHD2-202ENST00000586546 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
HDHD2-202ENST00000586546 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
HDHD2-202ENST00000586546 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
HDHD2-202ENST00000586546 PBRM1Q86U86 1689 aa26.71■■□□□ 1.87
HDHD2-202ENST00000586546 MAGI1Q96QZ7 1491 aaPredicted RBP26.71■■□□□ 1.87
HDHD2-202ENST00000586546 SNAPC4Q5SXM2 1469 aa26.69■■□□□ 1.86
HDHD2-202ENST00000586546 IGF1RP08069 1367 aa26.69■■□□□ 1.86
HDHD2-202ENST00000586546 RUSC2Q8N2Y8 1516 aa26.64■■□□□ 1.85
HDHD2-202ENST00000586546 SYNJ2O15056 1496 aa26.61■■□□□ 1.85
HDHD2-202ENST00000586546 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
HDHD2-202ENST00000586546 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
HDHD2-202ENST00000586546 CHD1O14646 1710 aa26.58■■□□□ 1.85
HDHD2-202ENST00000586546 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
HDHD2-202ENST00000586546 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
HDHD2-202ENST00000586546 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
HDHD2-202ENST00000586546 FBLN2P98095 1184 aa26.56■■□□□ 1.84
HDHD2-202ENST00000586546 EEA1Q15075 1411 aa26.56■■□□□ 1.84
HDHD2-202ENST00000586546 ADAMTS12P58397 1594 aa26.55■■□□□ 1.84
HDHD2-202ENST00000586546 CUL7Q14999 1698 aa26.51■■□□□ 1.83
HDHD2-202ENST00000586546 CARMIL1Q5VZK9 1371 aa26.5■■□□□ 1.83
HDHD2-202ENST00000586546 CSRNP3Q8WYN3 585 aa26.48■■□□□ 1.83
HDHD2-202ENST00000586546 GRIN2AQ12879 1464 aa26.46■■□□□ 1.83
HDHD2-202ENST00000586546 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
HDHD2-202ENST00000586546 PRXQ9BXM0 1461 aa26.39■■□□□ 1.82
HDHD2-202ENST00000586546 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
HDHD2-202ENST00000586546 RAPGEF2Q9Y4G8 1499 aa26.37■■□□□ 1.81
HDHD2-202ENST00000586546 NUP160Q12769 1436 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms