RNA–Protein interactions for RNA: ENST00000586470.5

ZNF556-203, Transcript of zinc finger protein 556, humanhuman

TSL 3

Gene ZNF556, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-203ENST00000586470 NISCHQ9Y2I1 1504 aa35.33■■■■□ 3.25
ZNF556-203ENST00000586470 CCDC180Q9P1Z9 1646 aa31.27■■■□□ 2.6
ZNF556-203ENST00000586470 ABCC9O60706 1549 aa30.55■■■□□ 2.48
ZNF556-203ENST00000586470 DCAF8L2P0C7V8 631 aa29.52■■■□□ 2.32
ZNF556-203ENST00000586470 NACADO15069 1562 aa29.45■■■□□ 2.31
ZNF556-203ENST00000586470 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
ZNF556-203ENST00000586470 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
ZNF556-203ENST00000586470 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
ZNF556-203ENST00000586470 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
ZNF556-203ENST00000586470 UNC13AQ9UPW8 1703 aa28.66■■■□□ 2.18
ZNF556-203ENST00000586470 PABPN1Q86U42 306 aaKnown RBP eCLIP28.64■■■□□ 2.18
ZNF556-203ENST00000586470 BICRAQ9NZM4 1560 aa28.54■■■□□ 2.16
ZNF556-203ENST00000586470 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
ZNF556-203ENST00000586470 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
ZNF556-203ENST00000586470 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
ZNF556-203ENST00000586470 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
ZNF556-203ENST00000586470 CC2D2AQ9P2K1 1620 aa27.62■■■□□ 2.01
ZNF556-203ENST00000586470 CECR2Q9BXF3 1484 aa27.52■■■□□ 2
ZNF556-203ENST00000586470 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
ZNF556-203ENST00000586470 SMARCA4P51532 1647 aa27.34■■□□□ 1.97
ZNF556-203ENST00000586470 NCAPD3P42695 1498 aa27.24■■□□□ 1.95
ZNF556-203ENST00000586470 ATAD2BQ9ULI0 1458 aa27.23■■□□□ 1.95
ZNF556-203ENST00000586470 MROH2BQ7Z745 1585 aa27.22■■□□□ 1.95
ZNF556-203ENST00000586470 SMARCA2P51531 1590 aa27.16■■□□□ 1.94
ZNF556-203ENST00000586470 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
ZNF556-203ENST00000586470 HMGXB3Q12766 1538 aa27.02■■□□□ 1.92
ZNF556-203ENST00000586470 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
ZNF556-203ENST00000586470 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
ZNF556-203ENST00000586470 WIZO95785 1651 aa26.89■■□□□ 1.89
ZNF556-203ENST00000586470 TOP2AP11388 1531 aaKnown RBP26.62■■□□□ 1.85
ZNF556-203ENST00000586470 NESP48681 1621 aa26.48■■□□□ 1.83
ZNF556-203ENST00000586470 CADPSQ9ULU8 1353 aa26.45■■□□□ 1.82
ZNF556-203ENST00000586470 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
ZNF556-203ENST00000586470 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
ZNF556-203ENST00000586470 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
ZNF556-203ENST00000586470 ERCC6Q03468 1493 aa26.31■■□□□ 1.8
ZNF556-203ENST00000586470 PDS5BQ9NTI5 1447 aa26.3■■□□□ 1.8
ZNF556-203ENST00000586470 CFTRP13569 1480 aa26.3■■□□□ 1.8
ZNF556-203ENST00000586470 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
ZNF556-203ENST00000586470 KIF21AQ7Z4S6 1674 aa26.07■■□□□ 1.76
ZNF556-203ENST00000586470 CUX2O14529 1486 aa26.03■■□□□ 1.76
ZNF556-203ENST00000586470 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
ZNF556-203ENST00000586470 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
ZNF556-203ENST00000586470 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
ZNF556-203ENST00000586470 PRDM2Q13029 1718 aa25.92■■□□□ 1.74
ZNF556-203ENST00000586470 WDR62O43379 1518 aa25.87■■□□□ 1.73
ZNF556-203ENST00000586470 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
ZNF556-203ENST00000586470 ABCC8Q09428 1581 aa25.71■■□□□ 1.71
ZNF556-203ENST00000586470 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
ZNF556-203ENST00000586470 DNMBPQ6XZF7 1577 aa25.62■■□□□ 1.69
ZNF556-203ENST00000586470 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
ZNF556-203ENST00000586470 CUX1P39880 1505 aa25.52■■□□□ 1.68
ZNF556-203ENST00000586470 IFT140Q96RY7 1462 aa25.5■■□□□ 1.67
ZNF556-203ENST00000586470 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
ZNF556-203ENST00000586470 SOGA1O94964 1423 aa25.42■■□□□ 1.66
ZNF556-203ENST00000586470 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
ZNF556-203ENST00000586470 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
ZNF556-203ENST00000586470 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
ZNF556-203ENST00000586470 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
ZNF556-203ENST00000586470 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
ZNF556-203ENST00000586470 TOP2BQ02880 1626 aa25.32■■□□□ 1.64
ZNF556-203ENST00000586470 SYNJ1O43426 1573 aa25.29■■□□□ 1.64
ZNF556-203ENST00000586470 BIVM-ERCC5R4GMW8 1640 aa25.28■■□□□ 1.64
ZNF556-203ENST00000586470 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.64
ZNF556-203ENST00000586470 TDRD9Q8NDG6 1382 aaKnown RBP25.25■■□□□ 1.63
ZNF556-203ENST00000586470 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
ZNF556-203ENST00000586470 ABCA10Q8WWZ4 1543 aa25.2■■□□□ 1.62
ZNF556-203ENST00000586470 EIF4G3O43432 1585 aaKnown RBP25.19■■□□□ 1.62
ZNF556-203ENST00000586470 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
ZNF556-203ENST00000586470 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
ZNF556-203ENST00000586470 GRIN2BQ13224 1484 aa25.08■■□□□ 1.6
ZNF556-203ENST00000586470 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
ZNF556-203ENST00000586470 ABCA5Q8WWZ7 1642 aa25.02■■□□□ 1.6
ZNF556-203ENST00000586470 SNAPC4Q5SXM2 1469 aa24.98■■□□□ 1.59
ZNF556-203ENST00000586470 MAGI1Q96QZ7 1491 aaPredicted RBP24.98■■□□□ 1.59
ZNF556-203ENST00000586470 FBLN2P98095 1184 aa24.95■■□□□ 1.58
ZNF556-203ENST00000586470 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
ZNF556-203ENST00000586470 CHMP7Q8WUX9 453 aaPredicted RBP24.93■■□□□ 1.58
ZNF556-203ENST00000586470 PBRM1Q86U86 1689 aa24.9■■□□□ 1.58
ZNF556-203ENST00000586470 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
ZNF556-203ENST00000586470 SYNJ2O15056 1496 aa24.89■■□□□ 1.57
ZNF556-203ENST00000586470 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
ZNF556-203ENST00000586470 IGF1RP08069 1367 aa24.84■■□□□ 1.57
ZNF556-203ENST00000586470 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
ZNF556-203ENST00000586470 CHD1O14646 1710 aa24.82■■□□□ 1.56
ZNF556-203ENST00000586470 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
ZNF556-203ENST00000586470 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
ZNF556-203ENST00000586470 GRIN2AQ12879 1464 aa24.73■■□□□ 1.55
ZNF556-203ENST00000586470 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.54
ZNF556-203ENST00000586470 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
ZNF556-203ENST00000586470 NUP160Q12769 1436 aa24.64■■□□□ 1.54
ZNF556-203ENST00000586470 CLASP1Q7Z460 1538 aa24.64■■□□□ 1.53
ZNF556-203ENST00000586470 CUL7Q14999 1698 aa24.62■■□□□ 1.53
ZNF556-203ENST00000586470 CEP170Q5SW79 1584 aa24.58■■□□□ 1.52
ZNF556-203ENST00000586470 ARHGEF11O15085 1522 aa24.54■■□□□ 1.52
ZNF556-203ENST00000586470 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
ZNF556-203ENST00000586470 RAPGEF2Q9Y4G8 1499 aa24.5■■□□□ 1.51
ZNF556-203ENST00000586470 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
ZNF556-203ENST00000586470 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
ZNF556-203ENST00000586470 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms