RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
TREM1-203ENST00000586287 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
TREM1-203ENST00000586287 ABCC9O60706 1549 aa16.41■□□□□ 0.22
TREM1-203ENST00000586287 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
TREM1-203ENST00000586287 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
TREM1-203ENST00000586287 DCAF1Q9Y4B6 1507 aa16.05■□□□□ 0.16
TREM1-203ENST00000586287 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
TREM1-203ENST00000586287 NACADO15069 1562 aa15.96■□□□□ 0.15
TREM1-203ENST00000586287 AEBP2Q6ZN18 517 aaPredicted RBP15.94■□□□□ 0.14
TREM1-203ENST00000586287 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
TREM1-203ENST00000586287 SCRIBQ14160 1630 aa15.6■□□□□ 0.09
TREM1-203ENST00000586287 SHROOM4Q9ULL8 1493 aa15.54■□□□□ 0.08
TREM1-203ENST00000586287 UNC13AQ9UPW8 1703 aa15.53■□□□□ 0.08
TREM1-203ENST00000586287 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
TREM1-203ENST00000586287 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
TREM1-203ENST00000586287 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
TREM1-203ENST00000586287 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
TREM1-203ENST00000586287 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
TREM1-203ENST00000586287 EIF4G1Q04637 1599 aaKnown RBP14.99□□□□□ -0.01
TREM1-203ENST00000586287 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
TREM1-203ENST00000586287 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
TREM1-203ENST00000586287 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
TREM1-203ENST00000586287 RSF1Q96T23 1441 aaPredicted RBP14.93□□□□□ -0.02
TREM1-203ENST00000586287 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
TREM1-203ENST00000586287 ATAD2BQ9ULI0 1458 aa14.83□□□□□ -0.03
TREM1-203ENST00000586287 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
TREM1-203ENST00000586287 WIZO95785 1651 aa14.81□□□□□ -0.04
TREM1-203ENST00000586287 SUPT5HO00267 1087 aaKnown RBP14.79□□□□□ -0.04
TREM1-203ENST00000586287 SMARCA2P51531 1590 aa14.77□□□□□ -0.04
TREM1-203ENST00000586287 NCAPD3P42695 1498 aa14.77□□□□□ -0.04
TREM1-203ENST00000586287 HMGXB3Q12766 1538 aa14.69□□□□□ -0.06
TREM1-203ENST00000586287 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
TREM1-203ENST00000586287 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
TREM1-203ENST00000586287 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
TREM1-203ENST00000586287 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
TREM1-203ENST00000586287 CFTRP13569 1480 aa14.34□□□□□ -0.11
TREM1-203ENST00000586287 NESP48681 1621 aa14.32□□□□□ -0.12
TREM1-203ENST00000586287 LAMC3Q9Y6N6 1575 aa14.27□□□□□ -0.12
TREM1-203ENST00000586287 PDS5BQ9NTI5 1447 aa14.18□□□□□ -0.14
TREM1-203ENST00000586287 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
TREM1-203ENST00000586287 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
TREM1-203ENST00000586287 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
TREM1-203ENST00000586287 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
TREM1-203ENST00000586287 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
TREM1-203ENST00000586287 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
TREM1-203ENST00000586287 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
TREM1-203ENST00000586287 WRNQ14191 1432 aaPredicted RBP eCLIP14.04□□□□□ -0.16
TREM1-203ENST00000586287 CUX1P39880 1505 aa14.02□□□□□ -0.16
TREM1-203ENST00000586287 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
TREM1-203ENST00000586287 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.16
TREM1-203ENST00000586287 THOC2Q8NI27 1593 aaKnown RBP13.99□□□□□ -0.17
TREM1-203ENST00000586287 TOPBP1Q92547 1522 aa13.99□□□□□ -0.17
TREM1-203ENST00000586287 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
TREM1-203ENST00000586287 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
TREM1-203ENST00000586287 WDR62O43379 1518 aa13.96□□□□□ -0.17
TREM1-203ENST00000586287 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
TREM1-203ENST00000586287 BIVM-ERCC5R4GMW8 1640 aa13.94□□□□□ -0.18
TREM1-203ENST00000586287 TRIM41Q8WV44 630 aa13.94□□□□□ -0.18
TREM1-203ENST00000586287 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
TREM1-203ENST00000586287 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
TREM1-203ENST00000586287 CUX2O14529 1486 aa13.87□□□□□ -0.19
TREM1-203ENST00000586287 SOGA1O94964 1423 aa13.85□□□□□ -0.19
TREM1-203ENST00000586287 RAD54L2Q9Y4B4 1467 aa13.85□□□□□ -0.19
TREM1-203ENST00000586287 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
TREM1-203ENST00000586287 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
TREM1-203ENST00000586287 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
TREM1-203ENST00000586287 TDRD9Q8NDG6 1382 aaKnown RBP13.75□□□□□ -0.21
TREM1-203ENST00000586287 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
TREM1-203ENST00000586287 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
TREM1-203ENST00000586287 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
TREM1-203ENST00000586287 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
TREM1-203ENST00000586287 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.21
TREM1-203ENST00000586287 KIF27Q86VH2 1401 aa13.7□□□□□ -0.22
TREM1-203ENST00000586287 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
TREM1-203ENST00000586287 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
TREM1-203ENST00000586287 IGF1RP08069 1367 aa13.67□□□□□ -0.22
TREM1-203ENST00000586287 FAM9AQ8IZU1 332 aaPredicted RBP13.66□□□□□ -0.22
TREM1-203ENST00000586287 EEA1Q15075 1411 aa13.65□□□□□ -0.22
TREM1-203ENST00000586287 EIF4G3O43432 1585 aaKnown RBP13.65□□□□□ -0.22
TREM1-203ENST00000586287 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
TREM1-203ENST00000586287 GRIN2BQ13224 1484 aa13.62□□□□□ -0.23
TREM1-203ENST00000586287 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
TREM1-203ENST00000586287 PBRM1Q86U86 1689 aa13.58□□□□□ -0.24
TREM1-203ENST00000586287 PRXQ9BXM0 1461 aa13.57□□□□□ -0.24
TREM1-203ENST00000586287 CARMIL1Q5VZK9 1371 aa13.57□□□□□ -0.24
TREM1-203ENST00000586287 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
TREM1-203ENST00000586287 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
TREM1-203ENST00000586287 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
TREM1-203ENST00000586287 PHF23Q9BUL5 403 aaPredicted RBP13.52□□□□□ -0.25
TREM1-203ENST00000586287 ADAMTS12P58397 1594 aa13.52□□□□□ -0.25
TREM1-203ENST00000586287 CUL7Q14999 1698 aa13.51□□□□□ -0.25
TREM1-203ENST00000586287 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
TREM1-203ENST00000586287 RAPGEF2Q9Y4G8 1499 aa13.5□□□□□ -0.25
TREM1-203ENST00000586287 KIF21BO75037 1637 aa13.49□□□□□ -0.25
TREM1-203ENST00000586287 LOC105371045A0A1W2PR82 267 aa13.47□□□□□ -0.25
TREM1-203ENST00000586287 CHMP7Q8WUX9 453 aaPredicted RBP13.47□□□□□ -0.25
TREM1-203ENST00000586287 GRIN2AQ12879 1464 aa13.45□□□□□ -0.26
TREM1-203ENST00000586287 FBLN2P98095 1184 aa13.45□□□□□ -0.26
TREM1-203ENST00000586287 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
TREM1-203ENST00000586287 GOLGA3Q08378 1498 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms