RNA–Protein interactions for RNA: ENST00000585512.5

GRN-203, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-203ENST00000585512 NISCHQ9Y2I1 1504 aa39.01■■■■□ 3.84
GRN-203ENST00000585512 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
GRN-203ENST00000585512 ABCC9O60706 1549 aa34.51■■■■□ 3.12
GRN-203ENST00000585512 DCAF8L2P0C7V8 631 aa33.1■■■□□ 2.89
GRN-203ENST00000585512 RB1CC1Q8TDY2 1594 aa32.95■■■□□ 2.86
GRN-203ENST00000585512 NACADO15069 1562 aa32.8■■■□□ 2.84
GRN-203ENST00000585512 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
GRN-203ENST00000585512 ZCCHC6Q5VYS8 1495 aaKnown RBP32.39■■■□□ 2.78
GRN-203ENST00000585512 PABPN1Q86U42 306 aaKnown RBP eCLIP32.29■■■□□ 2.76
GRN-203ENST00000585512 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
GRN-203ENST00000585512 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
GRN-203ENST00000585512 DNAJC5BQ9UF47 199 aa31.98■■■□□ 2.71
GRN-203ENST00000585512 BICRAQ9NZM4 1560 aa31.9■■■□□ 2.7
GRN-203ENST00000585512 SCRIBQ14160 1630 aa31.82■■■□□ 2.69
GRN-203ENST00000585512 SHROOM4Q9ULL8 1493 aa31.47■■■□□ 2.63
GRN-203ENST00000585512 EIF4G1Q04637 1599 aaKnown RBP31.14■■■□□ 2.58
GRN-203ENST00000585512 CC2D2AQ9P2K1 1620 aa31.12■■■□□ 2.57
GRN-203ENST00000585512 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.56
GRN-203ENST00000585512 SMARCA4P51532 1647 aa30.33■■■□□ 2.45
GRN-203ENST00000585512 NCAPD3P42695 1498 aa30.28■■■□□ 2.44
GRN-203ENST00000585512 ATAD2BQ9ULI0 1458 aa30.27■■■□□ 2.44
GRN-203ENST00000585512 BAZ1AQ9NRL2 1556 aaPredicted RBP30.27■■■□□ 2.44
GRN-203ENST00000585512 SMARCA2P51531 1590 aa30.21■■■□□ 2.43
GRN-203ENST00000585512 MROH2BQ7Z745 1585 aa30.09■■■□□ 2.41
GRN-203ENST00000585512 BAZ1BQ9UIG0 1483 aaKnown RBP30.06■■■□□ 2.4
GRN-203ENST00000585512 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
GRN-203ENST00000585512 PEG3Q9GZU2 1588 aa29.95■■■□□ 2.39
GRN-203ENST00000585512 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
GRN-203ENST00000585512 WIZO95785 1651 aa29.76■■■□□ 2.36
GRN-203ENST00000585512 NESP48681 1621 aa29.74■■■□□ 2.35
GRN-203ENST00000585512 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
GRN-203ENST00000585512 LAMC3Q9Y6N6 1575 aa29.53■■■□□ 2.32
GRN-203ENST00000585512 CUX2O14529 1486 aa29.47■■■□□ 2.31
GRN-203ENST00000585512 CADPSQ9ULU8 1353 aa29.45■■■□□ 2.31
GRN-203ENST00000585512 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
GRN-203ENST00000585512 TOP2AP11388 1531 aaKnown RBP29.38■■■□□ 2.29
GRN-203ENST00000585512 KIF21AQ7Z4S6 1674 aa29.3■■■□□ 2.28
GRN-203ENST00000585512 THOC2Q8NI27 1593 aaKnown RBP29.23■■■□□ 2.27
GRN-203ENST00000585512 CFTRP13569 1480 aa29.15■■■□□ 2.26
GRN-203ENST00000585512 FANCD2Q9BXW9 1451 aa29.11■■■□□ 2.25
GRN-203ENST00000585512 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
GRN-203ENST00000585512 CEP164Q9UPV0 1460 aa29.1■■■□□ 2.25
GRN-203ENST00000585512 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
GRN-203ENST00000585512 DNAJC5Q9H3Z4 198 aa29.05■■■□□ 2.24
GRN-203ENST00000585512 WDR62O43379 1518 aa28.97■■■□□ 2.23
GRN-203ENST00000585512 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.22
GRN-203ENST00000585512 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
GRN-203ENST00000585512 URB2Q14146 1524 aaKnown RBP28.8■■■□□ 2.2
GRN-203ENST00000585512 TOPBP1Q92547 1522 aa28.58■■■□□ 2.17
GRN-203ENST00000585512 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
GRN-203ENST00000585512 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
GRN-203ENST00000585512 IFT140Q96RY7 1462 aa28.49■■■□□ 2.15
GRN-203ENST00000585512 ZNF608Q9ULD9 1512 aaPredicted RBP28.41■■■□□ 2.14
GRN-203ENST00000585512 OSCARQ8IYS5 282 aa28.36■■■□□ 2.13
GRN-203ENST00000585512 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
GRN-203ENST00000585512 SOGA1O94964 1423 aa28.28■■■□□ 2.12
GRN-203ENST00000585512 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
GRN-203ENST00000585512 AQRO60306 1485 aaKnown RBP eCLIP28.26■■■□□ 2.11
GRN-203ENST00000585512 CUX1P39880 1505 aa28.23■■■□□ 2.11
GRN-203ENST00000585512 FGD5Q6ZNL6 1462 aa28.23■■■□□ 2.11
GRN-203ENST00000585512 TARBP1Q13395 1621 aaKnown RBP28.23■■■□□ 2.11
GRN-203ENST00000585512 EIF4G3O43432 1585 aaKnown RBP28.23■■■□□ 2.11
GRN-203ENST00000585512 TDRD9Q8NDG6 1382 aaKnown RBP28.19■■■□□ 2.1
GRN-203ENST00000585512 FBLN2P98095 1184 aa28.16■■■□□ 2.1
GRN-203ENST00000585512 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
GRN-203ENST00000585512 WRNQ14191 1432 aaPredicted RBP eCLIP28■■■□□ 2.07
GRN-203ENST00000585512 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
GRN-203ENST00000585512 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.07
GRN-203ENST00000585512 WDR97A6NE52 1622 aa27.94■■■□□ 2.06
GRN-203ENST00000585512 CHD1O14646 1710 aa27.94■■■□□ 2.06
GRN-203ENST00000585512 GRIN2BQ13224 1484 aa27.93■■■□□ 2.06
GRN-203ENST00000585512 GAPVD1Q14C86 1478 aa27.9■■■□□ 2.06
GRN-203ENST00000585512 ABCA10Q8WWZ4 1543 aa27.88■■■□□ 2.05
GRN-203ENST00000585512 SYNJ1O43426 1573 aa27.88■■■□□ 2.05
GRN-203ENST00000585512 TOP2BQ02880 1626 aa27.88■■■□□ 2.05
GRN-203ENST00000585512 MAGI1Q96QZ7 1491 aaPredicted RBP27.85■■■□□ 2.05
GRN-203ENST00000585512 BIVM-ERCC5R4GMW8 1640 aa27.85■■■□□ 2.05
GRN-203ENST00000585512 RIMBP3CA6NJZ7 1639 aa27.8■■■□□ 2.04
GRN-203ENST00000585512 RIMBP3BA6NNM3 1639 aa27.8■■■□□ 2.04
GRN-203ENST00000585512 RIMBP3Q9UFD9 1639 aa27.8■■■□□ 2.04
GRN-203ENST00000585512 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
GRN-203ENST00000585512 SYNJ2O15056 1496 aa27.77■■■□□ 2.04
GRN-203ENST00000585512 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
GRN-203ENST00000585512 ABCA5Q8WWZ7 1642 aa27.76■■■□□ 2.03
GRN-203ENST00000585512 CYB5RLQ6IPT4 315 aa27.72■■■□□ 2.03
GRN-203ENST00000585512 CLASP1Q7Z460 1538 aa27.59■■■□□ 2.01
GRN-203ENST00000585512 FHAD1B1AJZ9 1412 aa27.56■■■□□ 2
GRN-203ENST00000585512 GRIN2AQ12879 1464 aa27.55■■■□□ 2
GRN-203ENST00000585512 ADAMTS12P58397 1594 aa27.54■■■□□ 2
GRN-203ENST00000585512 ERICH3Q5RHP9 1530 aa27.54■■■□□ 2
GRN-203ENST00000585512 ARAP1Q96P48 1450 aa27.51■■■□□ 2
GRN-203ENST00000585512 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
GRN-203ENST00000585512 CEP170Q5SW79 1584 aa27.41■■□□□ 1.98
GRN-203ENST00000585512 NUP160Q12769 1436 aa27.41■■□□□ 1.98
GRN-203ENST00000585512 IGF1RP08069 1367 aa27.35■■□□□ 1.97
GRN-203ENST00000585512 TRHP20396 242 aaPredicted RBP27.35■■□□□ 1.97
GRN-203ENST00000585512 JPH4Q96JJ6 628 aa27.28■■□□□ 1.96
GRN-203ENST00000585512 ERCC6L2Q5T890 1561 aa27.26■■□□□ 1.95
GRN-203ENST00000585512 CARMIL1Q5VZK9 1371 aa27.23■■□□□ 1.95
GRN-203ENST00000585512 CUL7Q14999 1698 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms