RNA–Protein interactions for RNA: ENST00000585435.5

TRMT1-204, Transcript of tRNA methyltransferase 1, humanhuman

TSL 3

Gene TRMT1, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-204ENST00000585435 NISCHQ9Y2I1 1504 aa38.37■■■■□ 3.73
TRMT1-204ENST00000585435 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
TRMT1-204ENST00000585435 ABCC9O60706 1549 aa33.33■■■□□ 2.93
TRMT1-204ENST00000585435 DCAF8L2P0C7V8 631 aa32.15■■■□□ 2.74
TRMT1-204ENST00000585435 RB1CC1Q8TDY2 1594 aa32.11■■■□□ 2.73
TRMT1-204ENST00000585435 NACADO15069 1562 aa32.07■■■□□ 2.72
TRMT1-204ENST00000585435 DNAJC5BQ9UF47 199 aa31.98■■■□□ 2.71
TRMT1-204ENST00000585435 ZCCHC6Q5VYS8 1495 aaKnown RBP31.95■■■□□ 2.7
TRMT1-204ENST00000585435 MYO15BQ96JP2 1530 aa31.85■■■□□ 2.69
TRMT1-204ENST00000585435 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
TRMT1-204ENST00000585435 UNC13AQ9UPW8 1703 aa31.35■■■□□ 2.61
TRMT1-204ENST00000585435 PABPN1Q86U42 306 aaKnown RBP eCLIP31.15■■■□□ 2.582e-7■■■□□ 15.4
TRMT1-204ENST00000585435 SCRIBQ14160 1630 aa31.13■■■□□ 2.57
TRMT1-204ENST00000585435 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
TRMT1-204ENST00000585435 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
TRMT1-204ENST00000585435 EIF4G1Q04637 1599 aaKnown RBP30.27■■■□□ 2.44
TRMT1-204ENST00000585435 CECR2Q9BXF3 1484 aa30.16■■■□□ 2.42
TRMT1-204ENST00000585435 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.41
TRMT1-204ENST00000585435 DNAJC5Q9H3Z4 198 aa30.08■■■□□ 2.41
TRMT1-204ENST00000585435 SMARCA4P51532 1647 aa29.77■■■□□ 2.36
TRMT1-204ENST00000585435 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
TRMT1-204ENST00000585435 SMARCA2P51531 1590 aa29.6■■■□□ 2.33
TRMT1-204ENST00000585435 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
TRMT1-204ENST00000585435 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
TRMT1-204ENST00000585435 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
TRMT1-204ENST00000585435 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.31
TRMT1-204ENST00000585435 HMGXB3Q12766 1538 aa29.42■■■□□ 2.3
TRMT1-204ENST00000585435 BAZ1BQ9UIG0 1483 aaKnown RBP29.38■■■□□ 2.29
TRMT1-204ENST00000585435 WIZO95785 1651 aa29.27■■■□□ 2.28
TRMT1-204ENST00000585435 RSF1Q96T23 1441 aaPredicted RBP29.25■■■□□ 2.27
TRMT1-204ENST00000585435 CUX2O14529 1486 aa29.16■■■□□ 2.26
TRMT1-204ENST00000585435 TOP2AP11388 1531 aaKnown RBP28.96■■■□□ 2.23
TRMT1-204ENST00000585435 ERCC6Q03468 1493 aa28.9■■■□□ 2.22
TRMT1-204ENST00000585435 NESP48681 1621 aa28.82■■■□□ 2.2
TRMT1-204ENST00000585435 LAMC3Q9Y6N6 1575 aa28.8■■■□□ 2.2
TRMT1-204ENST00000585435 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
TRMT1-204ENST00000585435 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
TRMT1-204ENST00000585435 PDS5BQ9NTI5 1447 aa28.62■■■□□ 2.17
TRMT1-204ENST00000585435 CCDC88BA6NC98 1476 aa28.61■■■□□ 2.17
TRMT1-204ENST00000585435 CFTRP13569 1480 aa28.54■■■□□ 2.16
TRMT1-204ENST00000585435 KIF21AQ7Z4S6 1674 aa28.51■■■□□ 2.16
TRMT1-204ENST00000585435 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
TRMT1-204ENST00000585435 FANCD2Q9BXW9 1451 aa28.4■■■□□ 2.14
TRMT1-204ENST00000585435 CEP164Q9UPV0 1460 aa28.37■■■□□ 2.13
TRMT1-204ENST00000585435 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
TRMT1-204ENST00000585435 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
TRMT1-204ENST00000585435 MRC2Q9UBG0 1479 aa28.3■■■□□ 2.12
TRMT1-204ENST00000585435 WDR62O43379 1518 aa28.18■■■□□ 2.1
TRMT1-204ENST00000585435 URB2Q14146 1524 aaKnown RBP28.07■■■□□ 2.08
TRMT1-204ENST00000585435 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
TRMT1-204ENST00000585435 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
TRMT1-204ENST00000585435 DNMBPQ6XZF7 1577 aa27.92■■■□□ 2.06
TRMT1-204ENST00000585435 IFT140Q96RY7 1462 aa27.76■■■□□ 2.04
TRMT1-204ENST00000585435 CUX1P39880 1505 aa27.73■■■□□ 2.03
TRMT1-204ENST00000585435 OSCARQ8IYS5 282 aa27.7■■■□□ 2.02
TRMT1-204ENST00000585435 POLA1P09884 1462 aaPredicted RBP27.69■■■□□ 2.02
TRMT1-204ENST00000585435 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
TRMT1-204ENST00000585435 SOGA1O94964 1423 aa27.62■■■□□ 2.01
TRMT1-204ENST00000585435 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
TRMT1-204ENST00000585435 TARBP1Q13395 1621 aaKnown RBP27.61■■■□□ 2.01
TRMT1-204ENST00000585435 ZNF608Q9ULD9 1512 aaPredicted RBP27.59■■■□□ 2.01
TRMT1-204ENST00000585435 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
TRMT1-204ENST00000585435 TOP2BQ02880 1626 aa27.53■■■□□ 2
TRMT1-204ENST00000585435 BIVM-ERCC5R4GMW8 1640 aa27.52■■■□□ 2
TRMT1-204ENST00000585435 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
TRMT1-204ENST00000585435 SYNJ1O43426 1573 aa27.51■■□□□ 1.99
TRMT1-204ENST00000585435 AQRO60306 1485 aaKnown RBP eCLIP27.47■■□□□ 1.992e-7■■■□□ 15
TRMT1-204ENST00000585435 TDRD9Q8NDG6 1382 aaKnown RBP27.45■■□□□ 1.98
TRMT1-204ENST00000585435 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
TRMT1-204ENST00000585435 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
TRMT1-204ENST00000585435 RIMBP3CA6NJZ7 1639 aa27.3■■□□□ 1.96
TRMT1-204ENST00000585435 RIMBP3BA6NNM3 1639 aa27.3■■□□□ 1.96
TRMT1-204ENST00000585435 RIMBP3Q9UFD9 1639 aa27.3■■□□□ 1.96
TRMT1-204ENST00000585435 GAPVD1Q14C86 1478 aa27.3■■□□□ 1.96
TRMT1-204ENST00000585435 GRIN2BQ13224 1484 aa27.28■■□□□ 1.96
TRMT1-204ENST00000585435 ABCA5Q8WWZ7 1642 aa27.26■■□□□ 1.95
TRMT1-204ENST00000585435 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
TRMT1-204ENST00000585435 SNAPC4Q5SXM2 1469 aa27.22■■□□□ 1.95
TRMT1-204ENST00000585435 FBLN2P98095 1184 aa27.21■■□□□ 1.95
TRMT1-204ENST00000585435 MAGI1Q96QZ7 1491 aaPredicted RBP27.2■■□□□ 1.95
TRMT1-204ENST00000585435 CHD1O14646 1710 aa27.19■■□□□ 1.94
TRMT1-204ENST00000585435 ARHGEF11O15085 1522 aa27.18■■□□□ 1.94
TRMT1-204ENST00000585435 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
TRMT1-204ENST00000585435 SYNJ2O15056 1496 aa27.1■■□□□ 1.93
TRMT1-204ENST00000585435 ERICH3Q5RHP9 1530 aa27.07■■□□□ 1.92
TRMT1-204ENST00000585435 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
TRMT1-204ENST00000585435 KIF27Q86VH2 1401 aa27.06■■□□□ 1.92
TRMT1-204ENST00000585435 TRHP20396 242 aaPredicted RBP27.05■■□□□ 1.92
TRMT1-204ENST00000585435 ADAMTS12P58397 1594 aa27■■□□□ 1.91
TRMT1-204ENST00000585435 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
TRMT1-204ENST00000585435 GRIN2AQ12879 1464 aa26.92■■□□□ 1.9
TRMT1-204ENST00000585435 AEBP2Q6ZN18 517 aaPredicted RBP26.91■■□□□ 1.9
TRMT1-204ENST00000585435 IGF1RP08069 1367 aa26.89■■□□□ 1.9
TRMT1-204ENST00000585435 CUL7Q14999 1698 aa26.86■■□□□ 1.89
TRMT1-204ENST00000585435 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
TRMT1-204ENST00000585435 CLASP1Q7Z460 1538 aa26.84■■□□□ 1.89
TRMT1-204ENST00000585435 NUP160Q12769 1436 aa26.77■■□□□ 1.88
TRMT1-204ENST00000585435 CEP170Q5SW79 1584 aa26.76■■□□□ 1.87
TRMT1-204ENST00000585435 CARMIL1Q5VZK9 1371 aa26.76■■□□□ 1.87
TRMT1-204ENST00000585435 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms