RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 NISCHQ9Y2I1 1504 aa39.96■■■■□ 3.99
GCDH-203ENST00000585420 CCDC180Q9P1Z9 1646 aa35.39■■■■□ 3.26
GCDH-203ENST00000585420 ABCC9O60706 1549 aa34.64■■■■□ 3.14
GCDH-203ENST00000585420 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
GCDH-203ENST00000585420 ZCCHC6Q5VYS8 1495 aaKnown RBP33.31■■■□□ 2.92
GCDH-203ENST00000585420 RB1CC1Q8TDY2 1594 aa33.29■■■□□ 2.92
GCDH-203ENST00000585420 NACADO15069 1562 aa33.28■■■□□ 2.92
GCDH-203ENST00000585420 MYO15BQ96JP2 1530 aa33.1■■■□□ 2.89
GCDH-203ENST00000585420 DCAF1Q9Y4B6 1507 aa33.02■■■□□ 2.88
GCDH-203ENST00000585420 UNC13AQ9UPW8 1703 aa32.55■■■□□ 2.8
GCDH-203ENST00000585420 PABPN1Q86U42 306 aaKnown RBP eCLIP32.43■■■□□ 2.78
GCDH-203ENST00000585420 SCRIBQ14160 1630 aa32.39■■■□□ 2.78
GCDH-203ENST00000585420 BICRAQ9NZM4 1560 aa32.32■■■□□ 2.76
GCDH-203ENST00000585420 SHROOM4Q9ULL8 1493 aa31.9■■■□□ 2.7
GCDH-203ENST00000585420 DNAJC5BQ9UF47 199 aa31.75■■■□□ 2.67
GCDH-203ENST00000585420 EIF4G1Q04637 1599 aaKnown RBP31.45■■■□□ 2.63
GCDH-203ENST00000585420 CC2D2AQ9P2K1 1620 aa31.3■■■□□ 2.6
GCDH-203ENST00000585420 CECR2Q9BXF3 1484 aa31.17■■■□□ 2.58
GCDH-203ENST00000585420 SMARCA4P51532 1647 aa30.96■■■□□ 2.55
GCDH-203ENST00000585420 BAZ1AQ9NRL2 1556 aaPredicted RBP30.94■■■□□ 2.54
GCDH-203ENST00000585420 MROH2BQ7Z745 1585 aa30.83■■■□□ 2.53
GCDH-203ENST00000585420 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
GCDH-203ENST00000585420 NCAPD3P42695 1498 aa30.74■■■□□ 2.51
GCDH-203ENST00000585420 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
GCDH-203ENST00000585420 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
GCDH-203ENST00000585420 HMGXB3Q12766 1538 aa30.57■■■□□ 2.48
GCDH-203ENST00000585420 BAZ1BQ9UIG0 1483 aaKnown RBP30.53■■■□□ 2.48
GCDH-203ENST00000585420 RSF1Q96T23 1441 aaPredicted RBP30.52■■■□□ 2.48
GCDH-203ENST00000585420 WIZO95785 1651 aa30.49■■■□□ 2.47
GCDH-203ENST00000585420 TOP2AP11388 1531 aaKnown RBP30.13■■■□□ 2.41
GCDH-203ENST00000585420 NESP48681 1621 aa30.02■■■□□ 2.4
GCDH-203ENST00000585420 SUPT5HO00267 1087 aaKnown RBP29.9■■■□□ 2.38
GCDH-203ENST00000585420 LAMC3Q9Y6N6 1575 aa29.88■■■□□ 2.37
GCDH-203ENST00000585420 CADPSQ9ULU8 1353 aa29.88■■■□□ 2.37
GCDH-203ENST00000585420 CCDC88BA6NC98 1476 aa29.83■■■□□ 2.37
GCDH-203ENST00000585420 ERCC6Q03468 1493 aa29.81■■■□□ 2.36
GCDH-203ENST00000585420 CFTRP13569 1480 aa29.72■■■□□ 2.35
GCDH-203ENST00000585420 PDS5BQ9NTI5 1447 aa29.7■■■□□ 2.35
GCDH-203ENST00000585420 KIF21AQ7Z4S6 1674 aa29.61■■■□□ 2.33
GCDH-203ENST00000585420 FANCD2Q9BXW9 1451 aa29.52■■■□□ 2.32
GCDH-203ENST00000585420 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
GCDH-203ENST00000585420 CEP164Q9UPV0 1460 aa29.45■■■□□ 2.31
GCDH-203ENST00000585420 CUX2O14529 1486 aa29.42■■■□□ 2.3
GCDH-203ENST00000585420 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
GCDH-203ENST00000585420 MRC2Q9UBG0 1479 aa29.38■■■□□ 2.29
GCDH-203ENST00000585420 WDR62O43379 1518 aa29.29■■■□□ 2.28
GCDH-203ENST00000585420 URB2Q14146 1524 aaKnown RBP29.23■■■□□ 2.27
GCDH-203ENST00000585420 TOPBP1Q92547 1522 aa29.06■■■□□ 2.24
GCDH-203ENST00000585420 ABCC8Q09428 1581 aa29.01■■■□□ 2.24
GCDH-203ENST00000585420 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.23
GCDH-203ENST00000585420 CUX1P39880 1505 aa28.9■■■□□ 2.22
GCDH-203ENST00000585420 POLA1P09884 1462 aaPredicted RBP28.84■■■□□ 2.21
GCDH-203ENST00000585420 IFT140Q96RY7 1462 aa28.83■■■□□ 2.21
GCDH-203ENST00000585420 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
GCDH-203ENST00000585420 WRNQ14191 1432 aaPredicted RBP eCLIP28.75■■■□□ 2.19
GCDH-203ENST00000585420 ZNF608Q9ULD9 1512 aaPredicted RBP28.75■■■□□ 2.19
GCDH-203ENST00000585420 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
GCDH-203ENST00000585420 TARBP1Q13395 1621 aaKnown RBP28.72■■■□□ 2.19
GCDH-203ENST00000585420 SOGA1O94964 1423 aa28.72■■■□□ 2.19
GCDH-203ENST00000585420 SYNJ1O43426 1573 aa28.68■■■□□ 2.18
GCDH-203ENST00000585420 TOP2BQ02880 1626 aa28.65■■■□□ 2.18
GCDH-203ENST00000585420 BIVM-ERCC5R4GMW8 1640 aa28.63■■■□□ 2.17
GCDH-203ENST00000585420 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.171e-6■■■■■ 36.8
GCDH-203ENST00000585420 EIF4G3O43432 1585 aaKnown RBP28.59■■■□□ 2.17
GCDH-203ENST00000585420 TDRD9Q8NDG6 1382 aaKnown RBP28.58■■■□□ 2.17
GCDH-203ENST00000585420 ABCA10Q8WWZ4 1543 aa28.49■■■□□ 2.15
GCDH-203ENST00000585420 WDR97A6NE52 1622 aa28.49■■■□□ 2.15
GCDH-203ENST00000585420 DNAJC5Q9H3Z4 198 aa28.44■■■□□ 2.14
GCDH-203ENST00000585420 GAPVD1Q14C86 1478 aa28.38■■■□□ 2.13
GCDH-203ENST00000585420 ABCA5Q8WWZ7 1642 aa28.35■■■□□ 2.13
GCDH-203ENST00000585420 GRIN2BQ13224 1484 aa28.34■■■□□ 2.13
GCDH-203ENST00000585420 SNAPC4Q5SXM2 1469 aa28.32■■■□□ 2.12
GCDH-203ENST00000585420 OSCARQ8IYS5 282 aa28.28■■■□□ 2.12
GCDH-203ENST00000585420 PBRM1Q86U86 1689 aa28.27■■■□□ 2.12
GCDH-203ENST00000585420 FBLN2P98095 1184 aa28.26■■■□□ 2.11
GCDH-203ENST00000585420 MAGI1Q96QZ7 1491 aaPredicted RBP28.24■■■□□ 2.11
GCDH-203ENST00000585420 CHIC1Q5VXU3 224 aa28.22■■■□□ 2.11
GCDH-203ENST00000585420 TRIM41Q8WV44 630 aa28.2■■■□□ 2.1
GCDH-203ENST00000585420 CHD1O14646 1710 aa28.19■■■□□ 2.1
GCDH-203ENST00000585420 CHMP7Q8WUX9 453 aaPredicted RBP28.18■■■□□ 2.1
GCDH-203ENST00000585420 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
GCDH-203ENST00000585420 ERICH3Q5RHP9 1530 aa28.14■■■□□ 2.09
GCDH-203ENST00000585420 KIF27Q86VH2 1401 aa28.13■■■□□ 2.09
GCDH-203ENST00000585420 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
GCDH-203ENST00000585420 IGF1RP08069 1367 aa28.05■■■□□ 2.08
GCDH-203ENST00000585420 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
GCDH-203ENST00000585420 GRIN2AQ12879 1464 aa27.99■■■□□ 2.07
GCDH-203ENST00000585420 RUSC2Q8N2Y8 1516 aa27.99■■■□□ 2.07
GCDH-203ENST00000585420 CLASP1Q7Z460 1538 aa27.89■■■□□ 2.06
GCDH-203ENST00000585420 CUL7Q14999 1698 aa27.88■■■□□ 2.05
GCDH-203ENST00000585420 CARMIL1Q5VZK9 1371 aa27.87■■■□□ 2.05
GCDH-203ENST00000585420 NUP160Q12769 1436 aa27.86■■■□□ 2.05
GCDH-203ENST00000585420 CEP170Q5SW79 1584 aa27.85■■■□□ 2.05
GCDH-203ENST00000585420 ARHGEF11O15085 1522 aa27.8■■■□□ 2.04
GCDH-203ENST00000585420 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
GCDH-203ENST00000585420 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
GCDH-203ENST00000585420 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
GCDH-203ENST00000585420 RAPGEF2Q9Y4G8 1499 aa27.69■■■□□ 2.02
GCDH-203ENST00000585420 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
GCDH-203ENST00000585420 FAM9AQ8IZU1 332 aaPredicted RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms