RNA–Protein interactions for RNA: ENST00000585296.1

NCOR1-226, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best)

Gene NCOR1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-226ENST00000585296 NISCHQ9Y2I1 1504 aa46.53■■■■■ 5.04
NCOR1-226ENST00000585296 ABCC9O60706 1549 aa43.09■■■■■ 4.49
NCOR1-226ENST00000585296 CCDC180Q9P1Z9 1646 aa42.21■■■■■ 4.35
NCOR1-226ENST00000585296 DNAJC5BQ9UF47 199 aa41.24■■■■■ 4.19
NCOR1-226ENST00000585296 RB1CC1Q8TDY2 1594 aa40.63■■■■■ 4.09
NCOR1-226ENST00000585296 NACADO15069 1562 aa40.12■■■■■ 4.01
NCOR1-226ENST00000585296 PABPN1Q86U42 306 aaKnown RBP eCLIP39.92■■■■□ 3.98
NCOR1-226ENST00000585296 UNC13AQ9UPW8 1703 aa39.71■■■■□ 3.95
NCOR1-226ENST00000585296 DCAF8L2P0C7V8 631 aa39.6■■■■□ 3.93
NCOR1-226ENST00000585296 BICRAQ9NZM4 1560 aa39.47■■■■□ 3.91
NCOR1-226ENST00000585296 MYO15BQ96JP2 1530 aa39.27■■■■□ 3.88
NCOR1-226ENST00000585296 CECR2Q9BXF3 1484 aa38.93■■■■□ 3.82
NCOR1-226ENST00000585296 CC2D2AQ9P2K1 1620 aa38.9■■■■□ 3.82
NCOR1-226ENST00000585296 SHROOM4Q9ULL8 1493 aa38.89■■■■□ 3.82
NCOR1-226ENST00000585296 DNAJC5Q9H3Z4 198 aa38.6■■■■□ 3.77
NCOR1-226ENST00000585296 EIF4G1Q04637 1599 aaKnown RBP38.59■■■■□ 3.77
NCOR1-226ENST00000585296 DCAF1Q9Y4B6 1507 aa38.4■■■■□ 3.74
NCOR1-226ENST00000585296 ZCCHC6Q5VYS8 1495 aaKnown RBP38.37■■■■□ 3.73
NCOR1-226ENST00000585296 SCRIBQ14160 1630 aa38.36■■■■□ 3.73
NCOR1-226ENST00000585296 CUX2O14529 1486 aa37.58■■■■□ 3.61
NCOR1-226ENST00000585296 ERCC6Q03468 1493 aa37.28■■■■□ 3.56
NCOR1-226ENST00000585296 NCAPD3P42695 1498 aa37.04■■■■□ 3.52
NCOR1-226ENST00000585296 ATAD2BQ9ULI0 1458 aa36.78■■■■□ 3.48
NCOR1-226ENST00000585296 NESP48681 1621 aa36.74■■■■□ 3.47
NCOR1-226ENST00000585296 HMGXB3Q12766 1538 aa36.69■■■■□ 3.46
NCOR1-226ENST00000585296 SMARCA2P51531 1590 aa36.64■■■■□ 3.46
NCOR1-226ENST00000585296 THOC2Q8NI27 1593 aaKnown RBP36.61■■■■□ 3.45
NCOR1-226ENST00000585296 SMARCA4P51532 1647 aa36.52■■■■□ 3.44
NCOR1-226ENST00000585296 TRIM41Q8WV44 630 aa36.48■■■■□ 3.43
NCOR1-226ENST00000585296 BAZ1BQ9UIG0 1483 aaKnown RBP36.37■■■■□ 3.41
NCOR1-226ENST00000585296 LAMC3Q9Y6N6 1575 aa36.37■■■■□ 3.41
NCOR1-226ENST00000585296 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.4
NCOR1-226ENST00000585296 PEG3Q9GZU2 1588 aa36.19■■■■□ 3.38
NCOR1-226ENST00000585296 BAZ1AQ9NRL2 1556 aaPredicted RBP36.19■■■■□ 3.38
NCOR1-226ENST00000585296 PDS5BQ9NTI5 1447 aa36.17■■■■□ 3.38
NCOR1-226ENST00000585296 MRC2Q9UBG0 1479 aa35.92■■■■□ 3.34
NCOR1-226ENST00000585296 WDR62O43379 1518 aa35.88■■■■□ 3.33
NCOR1-226ENST00000585296 CADPSQ9ULU8 1353 aa35.85■■■■□ 3.33
NCOR1-226ENST00000585296 MROH2BQ7Z745 1585 aa35.83■■■■□ 3.33
NCOR1-226ENST00000585296 OSCARQ8IYS5 282 aa35.64■■■■□ 3.3
NCOR1-226ENST00000585296 CEP164Q9UPV0 1460 aa35.59■■■■□ 3.29
NCOR1-226ENST00000585296 FANCD2Q9BXW9 1451 aa35.46■■■■□ 3.27
NCOR1-226ENST00000585296 WIZO95785 1651 aa35.36■■■■□ 3.25
NCOR1-226ENST00000585296 RIMBP3CA6NJZ7 1639 aa35.33■■■■□ 3.25
NCOR1-226ENST00000585296 RIMBP3BA6NNM3 1639 aa35.33■■■■□ 3.25
NCOR1-226ENST00000585296 RIMBP3Q9UFD9 1639 aa35.33■■■■□ 3.25
NCOR1-226ENST00000585296 CFTRP13569 1480 aa35.26■■■■□ 3.23
NCOR1-226ENST00000585296 URB2Q14146 1524 aaKnown RBP35.22■■■■□ 3.23
NCOR1-226ENST00000585296 ARHGEF11O15085 1522 aa35.12■■■■□ 3.21
NCOR1-226ENST00000585296 ZNF608Q9ULD9 1512 aaPredicted RBP34.94■■■■□ 3.18
NCOR1-226ENST00000585296 IFT140Q96RY7 1462 aa34.91■■■■□ 3.18
NCOR1-226ENST00000585296 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
NCOR1-226ENST00000585296 CYB5RLQ6IPT4 315 aa34.86■■■■□ 3.17
NCOR1-226ENST00000585296 PRDM2Q13029 1718 aa34.86■■■■□ 3.17
NCOR1-226ENST00000585296 TRHP20396 242 aaPredicted RBP34.79■■■■□ 3.16
NCOR1-226ENST00000585296 EIF4G3O43432 1585 aaKnown RBP34.73■■■■□ 3.15
NCOR1-226ENST00000585296 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
NCOR1-226ENST00000585296 ARAP1Q96P48 1450 aa34.71■■■■□ 3.15
NCOR1-226ENST00000585296 TOPBP1Q92547 1522 aa34.68■■■■□ 3.14
NCOR1-226ENST00000585296 CHD1O14646 1710 aa34.64■■■■□ 3.14
NCOR1-226ENST00000585296 ABCC8Q09428 1581 aa34.54■■■■□ 3.12
NCOR1-226ENST00000585296 AEBP2Q6ZN18 517 aaPredicted RBP34.49■■■■□ 3.11
NCOR1-226ENST00000585296 AQRO60306 1485 aaKnown RBP eCLIP34.48■■■■□ 3.11
NCOR1-226ENST00000585296 DNMBPQ6XZF7 1577 aa34.48■■■■□ 3.11
NCOR1-226ENST00000585296 TARBP1Q13395 1621 aaKnown RBP34.45■■■■□ 3.11
NCOR1-226ENST00000585296 CCDC88BA6NC98 1476 aa34.45■■■■□ 3.1
NCOR1-226ENST00000585296 FBLN2P98095 1184 aa34.42■■■■□ 3.1
NCOR1-226ENST00000585296 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
NCOR1-226ENST00000585296 CLASP1Q7Z460 1538 aa34.24■■■■□ 3.07
NCOR1-226ENST00000585296 RAD54L2Q9Y4B4 1467 aa34.14■■■■□ 3.06
NCOR1-226ENST00000585296 SNAPC4Q5SXM2 1469 aa34.13■■■■□ 3.05
NCOR1-226ENST00000585296 SYNJ1O43426 1573 aa34.12■■■■□ 3.05
NCOR1-226ENST00000585296 TDRD9Q8NDG6 1382 aaKnown RBP34.11■■■■□ 3.05
NCOR1-226ENST00000585296 WDR97A6NE52 1622 aa34.07■■■■□ 3.04
NCOR1-226ENST00000585296 SOGA1O94964 1423 aa34.06■■■■□ 3.04
NCOR1-226ENST00000585296 CHMP7Q8WUX9 453 aaPredicted RBP34.03■■■■□ 3.04
NCOR1-226ENST00000585296 MAGI1Q96QZ7 1491 aaPredicted RBP34.01■■■■□ 3.04
NCOR1-226ENST00000585296 GAPVD1Q14C86 1478 aa33.92■■■■□ 3.02
NCOR1-226ENST00000585296 SYNJ2O15056 1496 aa33.91■■■■□ 3.02
NCOR1-226ENST00000585296 FGD5Q6ZNL6 1462 aa33.91■■■■□ 3.02
NCOR1-226ENST00000585296 GRIN2BQ13224 1484 aa33.9■■■■□ 3.02
NCOR1-226ENST00000585296 PBRM1Q86U86 1689 aa33.72■■■□□ 2.99
NCOR1-226ENST00000585296 CUX1P39880 1505 aa33.72■■■□□ 2.99
NCOR1-226ENST00000585296 ERCC6L2Q5T890 1561 aa33.6■■■□□ 2.97
NCOR1-226ENST00000585296 ABCA5Q8WWZ7 1642 aa33.53■■■□□ 2.96
NCOR1-226ENST00000585296 ABCA10Q8WWZ4 1543 aa33.48■■■□□ 2.95
NCOR1-226ENST00000585296 GRIN2AQ12879 1464 aa33.48■■■□□ 2.95
NCOR1-226ENST00000585296 CEP170Q5SW79 1584 aa33.47■■■□□ 2.95
NCOR1-226ENST00000585296 KIF13AQ9H1H9 1805 aa33.47■■■□□ 2.95
NCOR1-226ENST00000585296 NUP160Q12769 1436 aa33.41■■■□□ 2.94
NCOR1-226ENST00000585296 SHROOM2Q13796 1616 aa33.39■■■□□ 2.93
NCOR1-226ENST00000585296 ADAMTS12P58397 1594 aa33.34■■■□□ 2.93
NCOR1-226ENST00000585296 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
NCOR1-226ENST00000585296 ABCC10Q5T3U5 1492 aa33.17■■■□□ 2.9
NCOR1-226ENST00000585296 FAM69CQ0P6D2 419 aa33.14■■■□□ 2.9
NCOR1-226ENST00000585296 WRNQ14191 1432 aaPredicted RBP eCLIP33.13■■■□□ 2.89
NCOR1-226ENST00000585296 PRG4Q92954 1404 aaPredicted RBP33.13■■■□□ 2.89
NCOR1-226ENST00000585296 KDM4FA0A1W2PPD8 638 aa33.09■■■□□ 2.89
NCOR1-226ENST00000585296 ILDR1Q86SU0 546 aaPredicted RBP33.09■■■□□ 2.89
NCOR1-226ENST00000585296 MAPKBP1O60336 1514 aa33.07■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms