RNA–Protein interactions for RNA: ENST00000585263.1

CNDP2-229, Transcript of carnosine dipeptidase 2, humanhuman

Gene CNDP2, Length 2,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNDP2-229ENST00000585263 NISCHQ9Y2I1 1504 aa34.26■■■■□ 3.08
CNDP2-229ENST00000585263 CCDC180Q9P1Z9 1646 aa29.64■■■□□ 2.34
CNDP2-229ENST00000585263 DCAF8L2P0C7V8 631 aa28.79■■■□□ 2.2
CNDP2-229ENST00000585263 ZCCHC6Q5VYS8 1495 aaKnown RBP28.76■■■□□ 2.19
CNDP2-229ENST00000585263 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
CNDP2-229ENST00000585263 ABCC9O60706 1549 aa28.47■■■□□ 2.15
CNDP2-229ENST00000585263 DCAF1Q9Y4B6 1507 aa28.04■■■□□ 2.08
CNDP2-229ENST00000585263 SCRIBQ14160 1630 aa27.68■■■□□ 2.02
CNDP2-229ENST00000585263 NACADO15069 1562 aa27.63■■■□□ 2.01
CNDP2-229ENST00000585263 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
CNDP2-229ENST00000585263 RB1CC1Q8TDY2 1594 aa27.45■■□□□ 1.98
CNDP2-229ENST00000585263 SUPT5HO00267 1087 aaKnown RBP27.4■■□□□ 1.98
CNDP2-229ENST00000585263 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
CNDP2-229ENST00000585263 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.916e-6■■□□□ 12
CNDP2-229ENST00000585263 CECR2Q9BXF3 1484 aa26.86■■□□□ 1.89
CNDP2-229ENST00000585263 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
CNDP2-229ENST00000585263 RSF1Q96T23 1441 aaPredicted RBP26.69■■□□□ 1.86
CNDP2-229ENST00000585263 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
CNDP2-229ENST00000585263 WIZO95785 1651 aa26.47■■□□□ 1.83
CNDP2-229ENST00000585263 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
CNDP2-229ENST00000585263 SMARCA4P51532 1647 aa26.35■■□□□ 1.81
CNDP2-229ENST00000585263 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
CNDP2-229ENST00000585263 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
CNDP2-229ENST00000585263 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
CNDP2-229ENST00000585263 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
CNDP2-229ENST00000585263 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
CNDP2-229ENST00000585263 PEG3Q9GZU2 1588 aa25.84■■□□□ 1.73
CNDP2-229ENST00000585263 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
CNDP2-229ENST00000585263 BAZ1BQ9UIG0 1483 aaKnown RBP25.78■■□□□ 1.72
CNDP2-229ENST00000585263 CC2D2AQ9P2K1 1620 aa25.62■■□□□ 1.69
CNDP2-229ENST00000585263 NCAPD3P42695 1498 aa25.56■■□□□ 1.68
CNDP2-229ENST00000585263 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
CNDP2-229ENST00000585263 ABCC8Q09428 1581 aa25.49■■□□□ 1.67
CNDP2-229ENST00000585263 HMGXB3Q12766 1538 aa25.48■■□□□ 1.67
CNDP2-229ENST00000585263 FAM9AQ8IZU1 332 aaPredicted RBP25.4■■□□□ 1.66
CNDP2-229ENST00000585263 DNAJC5BQ9UF47 199 aa25.39■■□□□ 1.65
CNDP2-229ENST00000585263 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
CNDP2-229ENST00000585263 EHMT2Q96KQ7 1210 aa25.29■■□□□ 1.64
CNDP2-229ENST00000585263 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
CNDP2-229ENST00000585263 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
CNDP2-229ENST00000585263 CFTRP13569 1480 aa25.06■■□□□ 1.6
CNDP2-229ENST00000585263 NESP48681 1621 aa25.05■■□□□ 1.6
CNDP2-229ENST00000585263 CADPSQ9ULU8 1353 aa25■■□□□ 1.59
CNDP2-229ENST00000585263 SOGA1O94964 1423 aa24.99■■□□□ 1.59
CNDP2-229ENST00000585263 RUSC2Q8N2Y8 1516 aa24.97■■□□□ 1.59
CNDP2-229ENST00000585263 PRDM2Q13029 1718 aa24.86■■□□□ 1.57
CNDP2-229ENST00000585263 CUX1P39880 1505 aa24.86■■□□□ 1.57
CNDP2-229ENST00000585263 TOP2BQ02880 1626 aa24.81■■□□□ 1.56
CNDP2-229ENST00000585263 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
CNDP2-229ENST00000585263 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
CNDP2-229ENST00000585263 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
CNDP2-229ENST00000585263 CSRNP3Q8WYN3 585 aa24.66■■□□□ 1.54
CNDP2-229ENST00000585263 KIF21AQ7Z4S6 1674 aa24.62■■□□□ 1.53
CNDP2-229ENST00000585263 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.53
CNDP2-229ENST00000585263 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.53
CNDP2-229ENST00000585263 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
CNDP2-229ENST00000585263 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
CNDP2-229ENST00000585263 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
CNDP2-229ENST00000585263 UBTFP17480 764 aaKnown RBP24.5■■□□□ 1.51
CNDP2-229ENST00000585263 EEA1Q15075 1411 aa24.5■■□□□ 1.51
CNDP2-229ENST00000585263 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
CNDP2-229ENST00000585263 DNMBPQ6XZF7 1577 aa24.47■■□□□ 1.51
CNDP2-229ENST00000585263 CUX2O14529 1486 aa24.45■■□□□ 1.5
CNDP2-229ENST00000585263 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
CNDP2-229ENST00000585263 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
CNDP2-229ENST00000585263 RAPGEF2Q9Y4G8 1499 aa24.42■■□□□ 1.5
CNDP2-229ENST00000585263 KIF27Q86VH2 1401 aa24.39■■□□□ 1.49
CNDP2-229ENST00000585263 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
CNDP2-229ENST00000585263 PPARGC1BQ86YN6 1023 aaKnown RBP24.32■■□□□ 1.48
CNDP2-229ENST00000585263 KIF21BO75037 1637 aa24.32■■□□□ 1.48
CNDP2-229ENST00000585263 CEP162Q5TB80 1403 aa24.3■■□□□ 1.48
CNDP2-229ENST00000585263 ERCC6Q03468 1493 aa24.29■■□□□ 1.48
CNDP2-229ENST00000585263 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
CNDP2-229ENST00000585263 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
CNDP2-229ENST00000585263 IGF1RP08069 1367 aa24.26■■□□□ 1.47
CNDP2-229ENST00000585263 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
CNDP2-229ENST00000585263 MRC2Q9UBG0 1479 aa24.24■■□□□ 1.47
CNDP2-229ENST00000585263 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
CNDP2-229ENST00000585263 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
CNDP2-229ENST00000585263 PCGF6Q9BYE7 350 aa24.15■■□□□ 1.46
CNDP2-229ENST00000585263 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
CNDP2-229ENST00000585263 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
CNDP2-229ENST00000585263 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
CNDP2-229ENST00000585263 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
CNDP2-229ENST00000585263 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.45
CNDP2-229ENST00000585263 WDR62O43379 1518 aa24.08■■□□□ 1.45
CNDP2-229ENST00000585263 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.45
CNDP2-229ENST00000585263 CLIP1P30622 1438 aa24.07■■□□□ 1.44
CNDP2-229ENST00000585263 ZNF608Q9ULD9 1512 aaPredicted RBP24.06■■□□□ 1.44
CNDP2-229ENST00000585263 GAPVD1Q14C86 1478 aa24.05■■□□□ 1.44
CNDP2-229ENST00000585263 ABCA5Q8WWZ7 1642 aa24.05■■□□□ 1.44
CNDP2-229ENST00000585263 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
CNDP2-229ENST00000585263 IFT140Q96RY7 1462 aa23.9■■□□□ 1.42
CNDP2-229ENST00000585263 P3H3Q8IVL6 736 aa23.9■■□□□ 1.42
CNDP2-229ENST00000585263 CUL7Q14999 1698 aa23.89■■□□□ 1.41
CNDP2-229ENST00000585263 ARAP1Q96P48 1450 aa23.86■■□□□ 1.41
CNDP2-229ENST00000585263 TRIM26Q12899 539 aaPredicted RBP23.85■■□□□ 1.41
CNDP2-229ENST00000585263 EIF4G3O43432 1585 aaKnown RBP23.85■■□□□ 1.41
CNDP2-229ENST00000585263 PELP1Q8IZL8 1130 aaKnown RBP23.84■■□□□ 1.41
CNDP2-229ENST00000585263 ARHGAP35Q9NRY4 1499 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms