RNA–Protein interactions for RNA: ENST00000584822.1

PHF12-216, Transcript of PHD finger protein 12, humanhuman

TSL 4

Gene PHF12, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-216ENST00000584822 NISCHQ9Y2I1 1504 aa19.7■□□□□ 0.74
PHF12-216ENST00000584822 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
PHF12-216ENST00000584822 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
PHF12-216ENST00000584822 ABCC9O60706 1549 aa16.93■□□□□ 0.3
PHF12-216ENST00000584822 CHIC1Q5VXU3 224 aa16.65■□□□□ 0.26
PHF12-216ENST00000584822 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
PHF12-216ENST00000584822 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
PHF12-216ENST00000584822 NACADO15069 1562 aa16.38■□□□□ 0.21
PHF12-216ENST00000584822 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
PHF12-216ENST00000584822 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
PHF12-216ENST00000584822 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
PHF12-216ENST00000584822 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
PHF12-216ENST00000584822 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
PHF12-216ENST00000584822 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
PHF12-216ENST00000584822 BICRAQ9NZM4 1560 aa15.83■□□□□ 0.12
PHF12-216ENST00000584822 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.11
PHF12-216ENST00000584822 DNAJC5BQ9UF47 199 aa15.48■□□□□ 0.07
PHF12-216ENST00000584822 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
PHF12-216ENST00000584822 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.04
PHF12-216ENST00000584822 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
PHF12-216ENST00000584822 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
PHF12-216ENST00000584822 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
PHF12-216ENST00000584822 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
PHF12-216ENST00000584822 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
PHF12-216ENST00000584822 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
PHF12-216ENST00000584822 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
PHF12-216ENST00000584822 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
PHF12-216ENST00000584822 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
PHF12-216ENST00000584822 HMGXB3Q12766 1538 aa15.02■□□□□ -0
PHF12-216ENST00000584822 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
PHF12-216ENST00000584822 WIZO95785 1651 aa14.97□□□□□ -0.01
PHF12-216ENST00000584822 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
PHF12-216ENST00000584822 SUPT5HO00267 1087 aaKnown RBP14.81□□□□□ -0.04
PHF12-216ENST00000584822 CADPSQ9ULU8 1353 aa14.72□□□□□ -0.05
PHF12-216ENST00000584822 CCDC88BA6NC98 1476 aa14.71□□□□□ -0.05
PHF12-216ENST00000584822 NESP48681 1621 aa14.68□□□□□ -0.06
PHF12-216ENST00000584822 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
PHF12-216ENST00000584822 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
PHF12-216ENST00000584822 SENP3Q9H4L4 574 aaPredicted RBP14.65□□□□□ -0.06
PHF12-216ENST00000584822 CFTRP13569 1480 aa14.63□□□□□ -0.07
PHF12-216ENST00000584822 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
PHF12-216ENST00000584822 ERCC6Q03468 1493 aa14.59□□□□□ -0.07
PHF12-216ENST00000584822 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
PHF12-216ENST00000584822 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
PHF12-216ENST00000584822 KIF21AQ7Z4S6 1674 aa14.45□□□□□ -0.1
PHF12-216ENST00000584822 MRC2Q9UBG0 1479 aa14.43□□□□□ -0.1
PHF12-216ENST00000584822 CUX2O14529 1486 aa14.4□□□□□ -0.1
PHF12-216ENST00000584822 PRDM2Q13029 1718 aa14.4□□□□□ -0.1
PHF12-216ENST00000584822 THOC2Q8NI27 1593 aaKnown RBP14.39□□□□□ -0.11
PHF12-216ENST00000584822 WDR62O43379 1518 aa14.36□□□□□ -0.11
PHF12-216ENST00000584822 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
PHF12-216ENST00000584822 ABCC8Q09428 1581 aa14.33□□□□□ -0.12
PHF12-216ENST00000584822 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
PHF12-216ENST00000584822 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
PHF12-216ENST00000584822 CUX1P39880 1505 aa14.21□□□□□ -0.13
PHF12-216ENST00000584822 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
PHF12-216ENST00000584822 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
PHF12-216ENST00000584822 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
PHF12-216ENST00000584822 SOGA1O94964 1423 aa14.15□□□□□ -0.14
PHF12-216ENST00000584822 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
PHF12-216ENST00000584822 TOP2BQ02880 1626 aa14.12□□□□□ -0.15
PHF12-216ENST00000584822 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
PHF12-216ENST00000584822 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
PHF12-216ENST00000584822 TARBP1Q13395 1621 aaKnown RBP14.09□□□□□ -0.15
PHF12-216ENST00000584822 BIVM-ERCC5R4GMW8 1640 aa14.09□□□□□ -0.15
PHF12-216ENST00000584822 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
PHF12-216ENST00000584822 TDRD9Q8NDG6 1382 aaKnown RBP14.06□□□□□ -0.16
PHF12-216ENST00000584822 AQRO60306 1485 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■■■□ 21
PHF12-216ENST00000584822 ABCA10Q8WWZ4 1543 aa14.04□□□□□ -0.16
PHF12-216ENST00000584822 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
PHF12-216ENST00000584822 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
PHF12-216ENST00000584822 EIF4G3O43432 1585 aaKnown RBP13.98□□□□□ -0.17
PHF12-216ENST00000584822 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
PHF12-216ENST00000584822 GRIN2BQ13224 1484 aa13.96□□□□□ -0.17
PHF12-216ENST00000584822 ABCA5Q8WWZ7 1642 aa13.92□□□□□ -0.18
PHF12-216ENST00000584822 KIF27Q86VH2 1401 aa13.91□□□□□ -0.18
PHF12-216ENST00000584822 OSCARQ8IYS5 282 aa13.9□□□□□ -0.18
PHF12-216ENST00000584822 MAGI1Q96QZ7 1491 aaPredicted RBP13.89□□□□□ -0.19
PHF12-216ENST00000584822 SNAPC4Q5SXM2 1469 aa13.88□□□□□ -0.19
PHF12-216ENST00000584822 FBLN2P98095 1184 aa13.88□□□□□ -0.19
PHF12-216ENST00000584822 CHMP7Q8WUX9 453 aaPredicted RBP13.88□□□□□ -0.19
PHF12-216ENST00000584822 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
PHF12-216ENST00000584822 IGF1RP08069 1367 aa13.86□□□□□ -0.19
PHF12-216ENST00000584822 ERICH3Q5RHP9 1530 aa13.86□□□□□ -0.19
PHF12-216ENST00000584822 SYNJ2O15056 1496 aa13.84□□□□□ -0.19
PHF12-216ENST00000584822 FHAD1B1AJZ9 1412 aa13.83□□□□□ -0.2
PHF12-216ENST00000584822 PBRM1Q86U86 1689 aa13.83□□□□□ -0.2
PHF12-216ENST00000584822 RUSC2Q8N2Y8 1516 aa13.8□□□□□ -0.2
PHF12-216ENST00000584822 ADAMTS12P58397 1594 aa13.77□□□□□ -0.21
PHF12-216ENST00000584822 CARMIL1Q5VZK9 1371 aa13.77□□□□□ -0.21
PHF12-216ENST00000584822 GRIN2AQ12879 1464 aa13.75□□□□□ -0.21
PHF12-216ENST00000584822 CHD1O14646 1710 aa13.75□□□□□ -0.21
PHF12-216ENST00000584822 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
PHF12-216ENST00000584822 EEA1Q15075 1411 aa13.73□□□□□ -0.21
PHF12-216ENST00000584822 CUL7Q14999 1698 aa13.72□□□□□ -0.21
PHF12-216ENST00000584822 NUP160Q12769 1436 aa13.71□□□□□ -0.22
PHF12-216ENST00000584822 FAM9AQ8IZU1 332 aaPredicted RBP13.69□□□□□ -0.22
PHF12-216ENST00000584822 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
PHF12-216ENST00000584822 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
PHF12-216ENST00000584822 CLASP1Q7Z460 1538 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms