RNA–Protein interactions for RNA: ENST00000584749.1

LINC00511-217, long intergenic non-protein coding RNA 511, humanhuman

TSL 3

Gene LINC00511, Length 391 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-217ENST00000584749 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
LINC00511-217ENST00000584749 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
LINC00511-217ENST00000584749 NISCHQ9Y2I1 1504 aa18.96■□□□□ 0.63
LINC00511-217ENST00000584749 ABCC9O60706 1549 aa17.66■□□□□ 0.42
LINC00511-217ENST00000584749 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
LINC00511-217ENST00000584749 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
LINC00511-217ENST00000584749 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
LINC00511-217ENST00000584749 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
LINC00511-217ENST00000584749 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
LINC00511-217ENST00000584749 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
LINC00511-217ENST00000584749 NACADO15069 1562 aa16.43■□□□□ 0.22
LINC00511-217ENST00000584749 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC00511-217ENST00000584749 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
LINC00511-217ENST00000584749 BICRAQ9NZM4 1560 aa16.24■□□□□ 0.19
LINC00511-217ENST00000584749 DNAJC5Q9H3Z4 198 aa16.15■□□□□ 0.18
LINC00511-217ENST00000584749 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
LINC00511-217ENST00000584749 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
LINC00511-217ENST00000584749 CECR2Q9BXF3 1484 aa16■□□□□ 0.15
LINC00511-217ENST00000584749 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
LINC00511-217ENST00000584749 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
LINC00511-217ENST00000584749 EIF4G1Q04637 1599 aaKnown RBP15.82■□□□□ 0.12
LINC00511-217ENST00000584749 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
LINC00511-217ENST00000584749 ZCCHC6Q5VYS8 1495 aaKnown RBP15.59■□□□□ 0.09
LINC00511-217ENST00000584749 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
LINC00511-217ENST00000584749 CUX2O14529 1486 aa15.52■□□□□ 0.07
LINC00511-217ENST00000584749 NCAPD3P42695 1498 aa15.23■□□□□ 0.03
LINC00511-217ENST00000584749 ERCC6Q03468 1493 aa15.23■□□□□ 0.03
LINC00511-217ENST00000584749 ADRA2BP18089 450 aa15.21■□□□□ 0.03
LINC00511-217ENST00000584749 FOXD1Q16676 465 aa15.07■□□□□ 0
LINC00511-217ENST00000584749 KCNA4P22459 653 aa15.06■□□□□ 0
LINC00511-217ENST00000584749 ATAD2BQ9ULI0 1458 aa15.05■□□□□ -0
LINC00511-217ENST00000584749 NESP48681 1621 aa15.05■□□□□ -0
LINC00511-217ENST00000584749 PPP6R1Q9UPN7 881 aa15.03■□□□□ -0
LINC00511-217ENST00000584749 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
LINC00511-217ENST00000584749 TRIM41Q8WV44 630 aa15.02■□□□□ -0
LINC00511-217ENST00000584749 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
LINC00511-217ENST00000584749 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
LINC00511-217ENST00000584749 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
LINC00511-217ENST00000584749 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
LINC00511-217ENST00000584749 SMARCA4P51532 1647 aa14.86□□□□□ -0.03
LINC00511-217ENST00000584749 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
LINC00511-217ENST00000584749 PDS5BQ9NTI5 1447 aa14.81□□□□□ -0.04
LINC00511-217ENST00000584749 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
LINC00511-217ENST00000584749 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
LINC00511-217ENST00000584749 WDR62O43379 1518 aa14.72□□□□□ -0.05
LINC00511-217ENST00000584749 BAZ1AQ9NRL2 1556 aaPredicted RBP14.72□□□□□ -0.05
LINC00511-217ENST00000584749 MRC2Q9UBG0 1479 aa14.7□□□□□ -0.06
LINC00511-217ENST00000584749 OSCARQ8IYS5 282 aa14.7□□□□□ -0.06
LINC00511-217ENST00000584749 CADPSQ9ULU8 1353 aa14.69□□□□□ -0.06
LINC00511-217ENST00000584749 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.08
LINC00511-217ENST00000584749 SLC4A1APQ9BWU0 796 aaKnown RBP14.57□□□□□ -0.08
LINC00511-217ENST00000584749 PPP4R3CPQ6ZMV5 832 aa14.56□□□□□ -0.08
LINC00511-217ENST00000584749 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
LINC00511-217ENST00000584749 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
LINC00511-217ENST00000584749 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
LINC00511-217ENST00000584749 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
LINC00511-217ENST00000584749 CEP164Q9UPV0 1460 aa14.51□□□□□ -0.09
LINC00511-217ENST00000584749 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
LINC00511-217ENST00000584749 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
LINC00511-217ENST00000584749 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
LINC00511-217ENST00000584749 CFTRP13569 1480 aa14.44□□□□□ -0.1
LINC00511-217ENST00000584749 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
LINC00511-217ENST00000584749 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
LINC00511-217ENST00000584749 CYB5RLQ6IPT4 315 aa14.34□□□□□ -0.11
LINC00511-217ENST00000584749 WIZO95785 1651 aa14.33□□□□□ -0.11
LINC00511-217ENST00000584749 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
LINC00511-217ENST00000584749 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
LINC00511-217ENST00000584749 IFT140Q96RY7 1462 aa14.28□□□□□ -0.12
LINC00511-217ENST00000584749 TRHP20396 242 aaPredicted RBP14.26□□□□□ -0.13
LINC00511-217ENST00000584749 RSF1Q96T23 1441 aaPredicted RBP14.23□□□□□ -0.13
LINC00511-217ENST00000584749 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
LINC00511-217ENST00000584749 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
LINC00511-217ENST00000584749 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
LINC00511-217ENST00000584749 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
LINC00511-217ENST00000584749 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
LINC00511-217ENST00000584749 CHD1O14646 1710 aa14.13□□□□□ -0.15
LINC00511-217ENST00000584749 ABCC8Q09428 1581 aa14.11□□□□□ -0.15
LINC00511-217ENST00000584749 TARBP1Q13395 1621 aaKnown RBP14.11□□□□□ -0.15
LINC00511-217ENST00000584749 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
LINC00511-217ENST00000584749 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
LINC00511-217ENST00000584749 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
LINC00511-217ENST00000584749 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
LINC00511-217ENST00000584749 DNMBPQ6XZF7 1577 aa14.04□□□□□ -0.16
LINC00511-217ENST00000584749 CCDC88BA6NC98 1476 aa14.01□□□□□ -0.17
LINC00511-217ENST00000584749 FBLN2P98095 1184 aa14□□□□□ -0.17
LINC00511-217ENST00000584749 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
LINC00511-217ENST00000584749 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
LINC00511-217ENST00000584749 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
LINC00511-217ENST00000584749 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
LINC00511-217ENST00000584749 SNAPC4Q5SXM2 1469 aa13.91□□□□□ -0.18
LINC00511-217ENST00000584749 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
LINC00511-217ENST00000584749 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
LINC00511-217ENST00000584749 SOGA1O94964 1423 aa13.9□□□□□ -0.19
LINC00511-217ENST00000584749 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
LINC00511-217ENST00000584749 CHMP7Q8WUX9 453 aaPredicted RBP13.88□□□□□ -0.19
LINC00511-217ENST00000584749 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
LINC00511-217ENST00000584749 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
LINC00511-217ENST00000584749 ZBTB22O15209 634 aa13.81□□□□□ -0.2
LINC00511-217ENST00000584749 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
LINC00511-217ENST00000584749 ILDR1Q86SU0 546 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms