RNA–Protein interactions for RNA: ENST00000584722.1

AP002409.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP002409.1, Length 2,295 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002409.1-201ENST00000584722 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
AP002409.1-201ENST00000584722 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
AP002409.1-201ENST00000584722 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
AP002409.1-201ENST00000584722 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.12
AP002409.1-201ENST00000584722 SHROOM4Q9ULL8 1493 aa22.01■■□□□ 1.11
AP002409.1-201ENST00000584722 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
AP002409.1-201ENST00000584722 ABCC9O60706 1549 aa21.71■■□□□ 1.07
AP002409.1-201ENST00000584722 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
AP002409.1-201ENST00000584722 NACADO15069 1562 aa21.35■■□□□ 1.01
AP002409.1-201ENST00000584722 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
AP002409.1-201ENST00000584722 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
AP002409.1-201ENST00000584722 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
AP002409.1-201ENST00000584722 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
AP002409.1-201ENST00000584722 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
AP002409.1-201ENST00000584722 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
AP002409.1-201ENST00000584722 PABPN1Q86U42 306 aaKnown RBP eCLIP20.61■□□□□ 0.89
AP002409.1-201ENST00000584722 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
AP002409.1-201ENST00000584722 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
AP002409.1-201ENST00000584722 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
AP002409.1-201ENST00000584722 BAZ1AQ9NRL2 1556 aaPredicted RBP20.45■□□□□ 0.86
AP002409.1-201ENST00000584722 WIZO95785 1651 aa20.4■□□□□ 0.86
AP002409.1-201ENST00000584722 SMARCA4P51532 1647 aa20.34■□□□□ 0.85
AP002409.1-201ENST00000584722 TOP2AP11388 1531 aaKnown RBP20.13■□□□□ 0.81
AP002409.1-201ENST00000584722 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
AP002409.1-201ENST00000584722 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
AP002409.1-201ENST00000584722 ATAD2BQ9ULI0 1458 aa20.01■□□□□ 0.79
AP002409.1-201ENST00000584722 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
AP002409.1-201ENST00000584722 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
AP002409.1-201ENST00000584722 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
AP002409.1-201ENST00000584722 BAZ1BQ9UIG0 1483 aaKnown RBP19.88■□□□□ 0.77
AP002409.1-201ENST00000584722 NCAPD3P42695 1498 aa19.78■□□□□ 0.76
AP002409.1-201ENST00000584722 LOC105371045A0A1W2PR82 267 aa19.77■□□□□ 0.75
AP002409.1-201ENST00000584722 HMGXB3Q12766 1538 aa19.69■□□□□ 0.74
AP002409.1-201ENST00000584722 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
AP002409.1-201ENST00000584722 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
AP002409.1-201ENST00000584722 CC2D2AQ9P2K1 1620 aa19.57■□□□□ 0.72
AP002409.1-201ENST00000584722 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
AP002409.1-201ENST00000584722 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
AP002409.1-201ENST00000584722 CFTRP13569 1480 aa19.41■□□□□ 0.7
AP002409.1-201ENST00000584722 SOGA1O94964 1423 aa19.41■□□□□ 0.7
AP002409.1-201ENST00000584722 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
AP002409.1-201ENST00000584722 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
AP002409.1-201ENST00000584722 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
AP002409.1-201ENST00000584722 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
AP002409.1-201ENST00000584722 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
AP002409.1-201ENST00000584722 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
AP002409.1-201ENST00000584722 EEA1Q15075 1411 aa19.24■□□□□ 0.67
AP002409.1-201ENST00000584722 CUX1P39880 1505 aa19.22■□□□□ 0.67
AP002409.1-201ENST00000584722 BIVM-ERCC5R4GMW8 1640 aa19.19■□□□□ 0.66
AP002409.1-201ENST00000584722 NESP48681 1621 aa19.15■□□□□ 0.66
AP002409.1-201ENST00000584722 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
AP002409.1-201ENST00000584722 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
AP002409.1-201ENST00000584722 UBTFP17480 764 aaKnown RBP19.06■□□□□ 0.64
AP002409.1-201ENST00000584722 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
AP002409.1-201ENST00000584722 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
AP002409.1-201ENST00000584722 GOLGA3Q08378 1498 aa19.04■□□□□ 0.64
AP002409.1-201ENST00000584722 CEP164Q9UPV0 1460 aa19.01■□□□□ 0.63
AP002409.1-201ENST00000584722 LAMC3Q9Y6N6 1575 aa19■□□□□ 0.63
AP002409.1-201ENST00000584722 CEP162Q5TB80 1403 aa18.99■□□□□ 0.63
AP002409.1-201ENST00000584722 KIF21BO75037 1637 aa18.98■□□□□ 0.63
AP002409.1-201ENST00000584722 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
AP002409.1-201ENST00000584722 RAPGEF2Q9Y4G8 1499 aa18.97■□□□□ 0.63
AP002409.1-201ENST00000584722 KIF27Q86VH2 1401 aa18.96■□□□□ 0.63
AP002409.1-201ENST00000584722 HRCP23327 699 aa18.94■□□□□ 0.62
AP002409.1-201ENST00000584722 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
AP002409.1-201ENST00000584722 TOPBP1Q92547 1522 aa18.91■□□□□ 0.62
AP002409.1-201ENST00000584722 PDS5BQ9NTI5 1447 aa18.9■□□□□ 0.62
AP002409.1-201ENST00000584722 TRIM26Q12899 539 aaPredicted RBP18.9■□□□□ 0.62
AP002409.1-201ENST00000584722 CUX2O14529 1486 aa18.9■□□□□ 0.62
AP002409.1-201ENST00000584722 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
AP002409.1-201ENST00000584722 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
AP002409.1-201ENST00000584722 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
AP002409.1-201ENST00000584722 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
AP002409.1-201ENST00000584722 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
AP002409.1-201ENST00000584722 IGF1RP08069 1367 aa18.85■□□□□ 0.61
AP002409.1-201ENST00000584722 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
AP002409.1-201ENST00000584722 CLIP1P30622 1438 aa18.79■□□□□ 0.6
AP002409.1-201ENST00000584722 RANGAP1P46060 587 aaPredicted RBP18.79■□□□□ 0.6
AP002409.1-201ENST00000584722 KIF21AQ7Z4S6 1674 aa18.78■□□□□ 0.6
AP002409.1-201ENST00000584722 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.59
AP002409.1-201ENST00000584722 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
AP002409.1-201ENST00000584722 TDRD9Q8NDG6 1382 aaKnown RBP18.67■□□□□ 0.58
AP002409.1-201ENST00000584722 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
AP002409.1-201ENST00000584722 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.57
AP002409.1-201ENST00000584722 VPS8Q8N3P4 1428 aa18.63■□□□□ 0.57
AP002409.1-201ENST00000584722 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
AP002409.1-201ENST00000584722 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
AP002409.1-201ENST00000584722 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
AP002409.1-201ENST00000584722 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
AP002409.1-201ENST00000584722 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
AP002409.1-201ENST00000584722 ARHGAP35Q9NRY4 1499 aa18.54■□□□□ 0.56
AP002409.1-201ENST00000584722 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
AP002409.1-201ENST00000584722 WDR62O43379 1518 aa18.51■□□□□ 0.55
AP002409.1-201ENST00000584722 CUL7Q14999 1698 aa18.5■□□□□ 0.55
AP002409.1-201ENST00000584722 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.55
AP002409.1-201ENST00000584722 APLP2Q06481 763 aa18.47■□□□□ 0.55
AP002409.1-201ENST00000584722 IFT140Q96RY7 1462 aa18.44■□□□□ 0.54
AP002409.1-201ENST00000584722 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
AP002409.1-201ENST00000584722 P3H3Q8IVL6 736 aa18.41■□□□□ 0.54
AP002409.1-201ENST00000584722 THOC2Q8NI27 1593 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms