RNA–Protein interactions for RNA: ENST00000584709.5

SKAP1-207, Transcript of src kinase associated phosphoprotein 1, humanhuman

TSL 2

Gene SKAP1, Length 1,687 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-207ENST00000584709 NISCHQ9Y2I1 1504 aa55.26■■■■■ 6.44
SKAP1-207ENST00000584709 CCDC180Q9P1Z9 1646 aa48.65■■■■■ 5.38
SKAP1-207ENST00000584709 ABCC9O60706 1549 aa46.92■■■■■ 5.1
SKAP1-207ENST00000584709 ZCCHC6Q5VYS8 1495 aaKnown RBP46.21■■■■■ 4.99
SKAP1-207ENST00000584709 DCAF8L2P0C7V8 631 aa46.01■■■■■ 4.96
SKAP1-207ENST00000584709 DCAF1Q9Y4B6 1507 aa45.67■■■■■ 4.9
SKAP1-207ENST00000584709 NACADO15069 1562 aa45.55■■■■■ 4.88
SKAP1-207ENST00000584709 MYO15BQ96JP2 1530 aa45.5■■■■■ 4.87
SKAP1-207ENST00000584709 RB1CC1Q8TDY2 1594 aa45.41■■■■■ 4.86
SKAP1-207ENST00000584709 SCRIBQ14160 1630 aa44.61■■■■■ 4.73
SKAP1-207ENST00000584709 UNC13AQ9UPW8 1703 aa44.42■■■■■ 4.7
SKAP1-207ENST00000584709 SHROOM4Q9ULL8 1493 aa44.41■■■■■ 4.7
SKAP1-207ENST00000584709 PABPN1Q86U42 306 aaKnown RBP eCLIP44.06■■■■■ 4.64
SKAP1-207ENST00000584709 BICRAQ9NZM4 1560 aa44.03■■■■■ 4.64
SKAP1-207ENST00000584709 CECR2Q9BXF3 1484 aa43.03■■■■■ 4.48
SKAP1-207ENST00000584709 EIF4G1Q04637 1599 aaKnown RBP42.8■■■■■ 4.44
SKAP1-207ENST00000584709 BAZ1AQ9NRL2 1556 aaPredicted RBP42.75■■■■■ 4.43
SKAP1-207ENST00000584709 SMARCA4P51532 1647 aa42.69■■■■■ 4.42
SKAP1-207ENST00000584709 MROH2BQ7Z745 1585 aa42.66■■■■■ 4.42
SKAP1-207ENST00000584709 RSF1Q96T23 1441 aaPredicted RBP42.49■■■■■ 4.39
SKAP1-207ENST00000584709 CC2D2AQ9P2K1 1620 aa42.42■■■■■ 4.38
SKAP1-207ENST00000584709 DNAJC5BQ9UF47 199 aa42.28■■■■■ 4.36
SKAP1-207ENST00000584709 WIZO95785 1651 aa42.25■■■■■ 4.35
SKAP1-207ENST00000584709 SUPT5HO00267 1087 aaKnown RBP42.25■■■■■ 4.35
SKAP1-207ENST00000584709 ATAD2BQ9ULI0 1458 aa42.24■■■■■ 4.35
SKAP1-207ENST00000584709 SMARCA2P51531 1590 aa42.2■■■■■ 4.35
SKAP1-207ENST00000584709 PEG3Q9GZU2 1588 aa42.19■■■■■ 4.34
SKAP1-207ENST00000584709 NCAPD3P42695 1498 aa42.04■■■■■ 4.32
SKAP1-207ENST00000584709 BAZ1BQ9UIG0 1483 aaKnown RBP41.96■■■■■ 4.31
SKAP1-207ENST00000584709 HMGXB3Q12766 1538 aa41.89■■■■■ 4.3
SKAP1-207ENST00000584709 TOP2AP11388 1531 aaKnown RBP41.79■■■■■ 4.28
SKAP1-207ENST00000584709 CCDC88BA6NC98 1476 aa41.36■■■■■ 4.21
SKAP1-207ENST00000584709 CADPSQ9ULU8 1353 aa40.91■■■■■ 4.14
SKAP1-207ENST00000584709 NESP48681 1621 aa40.87■■■■■ 4.13
SKAP1-207ENST00000584709 CFTRP13569 1480 aa40.83■■■■■ 4.13
SKAP1-207ENST00000584709 LAMC3Q9Y6N6 1575 aa40.77■■■■■ 4.12
SKAP1-207ENST00000584709 PRDM2Q13029 1718 aa40.55■■■■■ 4.08
SKAP1-207ENST00000584709 PDS5BQ9NTI5 1447 aa40.51■■■■■ 4.08
SKAP1-207ENST00000584709 FANCD2Q9BXW9 1451 aa40.45■■■■■ 4.07
SKAP1-207ENST00000584709 KIF21AQ7Z4S6 1674 aa40.36■■■■■ 4.05
SKAP1-207ENST00000584709 ERCC6Q03468 1493 aa40.34■■■■■ 4.05
SKAP1-207ENST00000584709 CEP164Q9UPV0 1460 aa40.3■■■■■ 4.04
SKAP1-207ENST00000584709 ABCC8Q09428 1581 aa40.16■■■■■ 4.02
SKAP1-207ENST00000584709 MRC2Q9UBG0 1479 aa40.04■■■■■ 4
SKAP1-207ENST00000584709 WRNQ14191 1432 aaPredicted RBP eCLIP40.03■■■■■ 4
SKAP1-207ENST00000584709 URB2Q14146 1524 aaKnown RBP40■■■■□ 3.99
SKAP1-207ENST00000584709 THOC2Q8NI27 1593 aaKnown RBP39.96■■■■□ 3.99
SKAP1-207ENST00000584709 CUX1P39880 1505 aa39.95■■■■□ 3.99
SKAP1-207ENST00000584709 DNMBPQ6XZF7 1577 aa39.91■■■■□ 3.98
SKAP1-207ENST00000584709 TOPBP1Q92547 1522 aa39.9■■■■□ 3.98
SKAP1-207ENST00000584709 CHIC1Q5VXU3 224 aa39.89■■■■□ 3.98
SKAP1-207ENST00000584709 SYNJ1O43426 1573 aa39.89■■■■□ 3.98
SKAP1-207ENST00000584709 WDR62O43379 1518 aa39.85■■■■□ 3.97
SKAP1-207ENST00000584709 TOP2BQ02880 1626 aa39.81■■■■□ 3.96
SKAP1-207ENST00000584709 TRIM41Q8WV44 630 aa39.79■■■■□ 3.96
SKAP1-207ENST00000584709 BIVM-ERCC5R4GMW8 1640 aa39.78■■■■□ 3.96
SKAP1-207ENST00000584709 FGD5Q6ZNL6 1462 aa39.68■■■■□ 3.94
SKAP1-207ENST00000584709 POLA1P09884 1462 aaPredicted RBP39.62■■■■□ 3.93
SKAP1-207ENST00000584709 CUX2O14529 1486 aa39.52■■■■□ 3.92
SKAP1-207ENST00000584709 RAD54L2Q9Y4B4 1467 aa39.51■■■■□ 3.91
SKAP1-207ENST00000584709 SOGA1O94964 1423 aa39.5■■■■□ 3.91
SKAP1-207ENST00000584709 IFT140Q96RY7 1462 aa39.4■■■■□ 3.9
SKAP1-207ENST00000584709 TARBP1Q13395 1621 aaKnown RBP39.38■■■■□ 3.89
SKAP1-207ENST00000584709 ABCA10Q8WWZ4 1543 aa39.29■■■■□ 3.88
SKAP1-207ENST00000584709 WDR97A6NE52 1622 aa39.24■■■■□ 3.87
SKAP1-207ENST00000584709 TDRD9Q8NDG6 1382 aaKnown RBP39.22■■■■□ 3.87
SKAP1-207ENST00000584709 ZNF608Q9ULD9 1512 aaPredicted RBP39.22■■■■□ 3.87
SKAP1-207ENST00000584709 AQRO60306 1485 aaKnown RBP eCLIP39.13■■■■□ 3.85
SKAP1-207ENST00000584709 RUSC2Q8N2Y8 1516 aa39.12■■■■□ 3.85
SKAP1-207ENST00000584709 KIF27Q86VH2 1401 aa39.11■■■■□ 3.85
SKAP1-207ENST00000584709 EIF4G3O43432 1585 aaKnown RBP39.06■■■■□ 3.84
SKAP1-207ENST00000584709 ABCA5Q8WWZ7 1642 aa39.05■■■■□ 3.84
SKAP1-207ENST00000584709 GAPVD1Q14C86 1478 aa39.04■■■■□ 3.84
SKAP1-207ENST00000584709 FAM9AQ8IZU1 332 aaPredicted RBP39.04■■■■□ 3.84
SKAP1-207ENST00000584709 EEA1Q15075 1411 aa38.91■■■■□ 3.82
SKAP1-207ENST00000584709 GRIN2BQ13224 1484 aa38.89■■■■□ 3.82
SKAP1-207ENST00000584709 PBRM1Q86U86 1689 aa38.88■■■■□ 3.82
SKAP1-207ENST00000584709 IGF1RP08069 1367 aa38.86■■■■□ 3.81
SKAP1-207ENST00000584709 CSRNP3Q8WYN3 585 aa38.83■■■■□ 3.81
SKAP1-207ENST00000584709 ERICH3Q5RHP9 1530 aa38.82■■■■□ 3.81
SKAP1-207ENST00000584709 SNAPC4Q5SXM2 1469 aa38.76■■■■□ 3.79
SKAP1-207ENST00000584709 MAGI1Q96QZ7 1491 aaPredicted RBP38.67■■■■□ 3.78
SKAP1-207ENST00000584709 CARMIL1Q5VZK9 1371 aa38.67■■■■□ 3.78
SKAP1-207ENST00000584709 CUL7Q14999 1698 aa38.64■■■■□ 3.78
SKAP1-207ENST00000584709 ADAMTS12P58397 1594 aa38.62■■■■□ 3.77
SKAP1-207ENST00000584709 FHAD1B1AJZ9 1412 aa38.6■■■■□ 3.77
SKAP1-207ENST00000584709 PRXQ9BXM0 1461 aa38.58■■■■□ 3.77
SKAP1-207ENST00000584709 FBLN2P98095 1184 aa38.55■■■■□ 3.76
SKAP1-207ENST00000584709 EHMT2Q96KQ7 1210 aa38.55■■■■□ 3.76
SKAP1-207ENST00000584709 SYNJ2O15056 1496 aa38.53■■■■□ 3.76
SKAP1-207ENST00000584709 CHMP7Q8WUX9 453 aaPredicted RBP38.52■■■■□ 3.76
SKAP1-207ENST00000584709 RAPGEF2Q9Y4G8 1499 aa38.51■■■■□ 3.75
SKAP1-207ENST00000584709 KIF21BO75037 1637 aa38.46■■■■□ 3.75
SKAP1-207ENST00000584709 GRIN2AQ12879 1464 aa38.41■■■■□ 3.74
SKAP1-207ENST00000584709 CHD1O14646 1710 aa38.4■■■■□ 3.74
SKAP1-207ENST00000584709 LOC105371045A0A1W2PR82 267 aa38.34■■■■□ 3.73
SKAP1-207ENST00000584709 GOLGA3Q08378 1498 aa38.34■■■■□ 3.73
SKAP1-207ENST00000584709 UBTFP17480 764 aaKnown RBP38.27■■■■□ 3.72
SKAP1-207ENST00000584709 CEP170Q5SW79 1584 aa38.19■■■■□ 3.7
SKAP1-207ENST00000584709 NUP160Q12769 1436 aa38.17■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms