RNA–Protein interactions for RNA: ENST00000584617.5

RAD51C-216, Transcript of RAD51 paralog C, humanhuman

TSL 5

Gene RAD51C, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51C-216ENST00000584617 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
RAD51C-216ENST00000584617 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
RAD51C-216ENST00000584617 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
RAD51C-216ENST00000584617 ABCC9O60706 1549 aa19.78■□□□□ 0.76
RAD51C-216ENST00000584617 SENP3Q9H4L4 574 aaPredicted RBP19.48■□□□□ 0.71
RAD51C-216ENST00000584617 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
RAD51C-216ENST00000584617 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
RAD51C-216ENST00000584617 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
RAD51C-216ENST00000584617 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
RAD51C-216ENST00000584617 NACADO15069 1562 aa18.42■□□□□ 0.54
RAD51C-216ENST00000584617 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
RAD51C-216ENST00000584617 FOXD1Q16676 465 aa18.21■□□□□ 0.51
RAD51C-216ENST00000584617 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
RAD51C-216ENST00000584617 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
RAD51C-216ENST00000584617 BICRAQ9NZM4 1560 aa18.09■□□□□ 0.49
RAD51C-216ENST00000584617 MYO15BQ96JP2 1530 aa18.05■□□□□ 0.48
RAD51C-216ENST00000584617 DNAJC5Q9H3Z4 198 aa17.93■□□□□ 0.46
RAD51C-216ENST00000584617 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
RAD51C-216ENST00000584617 SHROOM4Q9ULL8 1493 aa17.91■□□□□ 0.46
RAD51C-216ENST00000584617 CC2D2AQ9P2K1 1620 aa17.85■□□□□ 0.45
RAD51C-216ENST00000584617 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
RAD51C-216ENST00000584617 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
RAD51C-216ENST00000584617 ZCCHC6Q5VYS8 1495 aaKnown RBP17.53■□□□□ 0.4
RAD51C-216ENST00000584617 SCRIBQ14160 1630 aa17.5■□□□□ 0.39
RAD51C-216ENST00000584617 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
RAD51C-216ENST00000584617 CUX2O14529 1486 aa17.33■□□□□ 0.37
RAD51C-216ENST00000584617 MSH5O43196 834 aa17.16■□□□□ 0.34
RAD51C-216ENST00000584617 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
RAD51C-216ENST00000584617 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
RAD51C-216ENST00000584617 PIAS4Q8N2W9 510 aaPredicted RBP16.95■□□□□ 0.3
RAD51C-216ENST00000584617 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
RAD51C-216ENST00000584617 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
RAD51C-216ENST00000584617 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
RAD51C-216ENST00000584617 NESP48681 1621 aa16.83■□□□□ 0.28
RAD51C-216ENST00000584617 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
RAD51C-216ENST00000584617 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
RAD51C-216ENST00000584617 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
RAD51C-216ENST00000584617 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.28
RAD51C-216ENST00000584617 ADRA2BP18089 450 aa16.71■□□□□ 0.27
RAD51C-216ENST00000584617 LAMC3Q9Y6N6 1575 aa16.7■□□□□ 0.26
RAD51C-216ENST00000584617 SMARCA4P51532 1647 aa16.68■□□□□ 0.26
RAD51C-216ENST00000584617 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
RAD51C-216ENST00000584617 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
RAD51C-216ENST00000584617 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.24
RAD51C-216ENST00000584617 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
RAD51C-216ENST00000584617 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
RAD51C-216ENST00000584617 MRC2Q9UBG0 1479 aa16.5■□□□□ 0.23
RAD51C-216ENST00000584617 CADPSQ9ULU8 1353 aa16.48■□□□□ 0.23
RAD51C-216ENST00000584617 WDR62O43379 1518 aa16.47■□□□□ 0.23
RAD51C-216ENST00000584617 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
RAD51C-216ENST00000584617 MROH2BQ7Z745 1585 aa16.36■□□□□ 0.21
RAD51C-216ENST00000584617 CEP164Q9UPV0 1460 aa16.32■□□□□ 0.2
RAD51C-216ENST00000584617 FANCD2Q9BXW9 1451 aa16.26■□□□□ 0.19
RAD51C-216ENST00000584617 RIMBP3CA6NJZ7 1639 aa16.22■□□□□ 0.19
RAD51C-216ENST00000584617 RIMBP3BA6NNM3 1639 aa16.22■□□□□ 0.19
RAD51C-216ENST00000584617 RIMBP3Q9UFD9 1639 aa16.22■□□□□ 0.19
RAD51C-216ENST00000584617 CFTRP13569 1480 aa16.18■□□□□ 0.18
RAD51C-216ENST00000584617 ARHGEF11O15085 1522 aa16.14■□□□□ 0.18
RAD51C-216ENST00000584617 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.17
RAD51C-216ENST00000584617 WIZO95785 1651 aa16.11■□□□□ 0.17
RAD51C-216ENST00000584617 CYB5RLQ6IPT4 315 aa16.08■□□□□ 0.16
RAD51C-216ENST00000584617 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
RAD51C-216ENST00000584617 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
RAD51C-216ENST00000584617 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
RAD51C-216ENST00000584617 ARAP1Q96P48 1450 aa15.94■□□□□ 0.14
RAD51C-216ENST00000584617 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
RAD51C-216ENST00000584617 TOP2AP11388 1531 aaKnown RBP15.92■□□□□ 0.14
RAD51C-216ENST00000584617 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
RAD51C-216ENST00000584617 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
RAD51C-216ENST00000584617 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
RAD51C-216ENST00000584617 PRDM2Q13029 1718 aa15.88■□□□□ 0.13
RAD51C-216ENST00000584617 CHD1O14646 1710 aa15.82■□□□□ 0.12
RAD51C-216ENST00000584617 FBLN2P98095 1184 aa15.82■□□□□ 0.12
RAD51C-216ENST00000584617 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.12
RAD51C-216ENST00000584617 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
RAD51C-216ENST00000584617 TARBP1Q13395 1621 aaKnown RBP15.77■□□□□ 0.12
RAD51C-216ENST00000584617 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
RAD51C-216ENST00000584617 CLASP1Q7Z460 1538 aa15.7■□□□□ 0.1
RAD51C-216ENST00000584617 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
RAD51C-216ENST00000584617 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
RAD51C-216ENST00000584617 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
RAD51C-216ENST00000584617 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
RAD51C-216ENST00000584617 WDR97A6NE52 1622 aa15.64■□□□□ 0.09
RAD51C-216ENST00000584617 SOGA1O94964 1423 aa15.63■□□□□ 0.09
RAD51C-216ENST00000584617 SNAPC4Q5SXM2 1469 aa15.63■□□□□ 0.09
RAD51C-216ENST00000584617 MAGI1Q96QZ7 1491 aaPredicted RBP15.62■□□□□ 0.09
RAD51C-216ENST00000584617 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
RAD51C-216ENST00000584617 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
RAD51C-216ENST00000584617 SYNJ2O15056 1496 aa15.57■□□□□ 0.08
RAD51C-216ENST00000584617 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
RAD51C-216ENST00000584617 FGD5Q6ZNL6 1462 aa15.51■□□□□ 0.07
RAD51C-216ENST00000584617 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
RAD51C-216ENST00000584617 CUX1P39880 1505 aa15.4■□□□□ 0.06
RAD51C-216ENST00000584617 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
RAD51C-216ENST00000584617 PBRM1Q86U86 1689 aa15.37■□□□□ 0.05
RAD51C-216ENST00000584617 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
RAD51C-216ENST00000584617 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
RAD51C-216ENST00000584617 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
RAD51C-216ENST00000584617 ABCA10Q8WWZ4 1543 aa15.33■□□□□ 0.05
RAD51C-216ENST00000584617 ILDR1Q86SU0 546 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms