RNA–Protein interactions for RNA: ENST00000584580.1

LRRC46-204, Transcript of leucine rich repeat containing 46, humanhuman

TSL 2

Gene LRRC46, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46-204ENST00000584580 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
LRRC46-204ENST00000584580 CCDC180Q9P1Z9 1646 aa22.67■■□□□ 1.22
LRRC46-204ENST00000584580 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
LRRC46-204ENST00000584580 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
LRRC46-204ENST00000584580 ABCC9O60706 1549 aa21.65■■□□□ 1.06
LRRC46-204ENST00000584580 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
LRRC46-204ENST00000584580 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
LRRC46-204ENST00000584580 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
LRRC46-204ENST00000584580 NACADO15069 1562 aa21.16■□□□□ 0.98
LRRC46-204ENST00000584580 SCRIBQ14160 1630 aa21.01■□□□□ 0.95
LRRC46-204ENST00000584580 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
LRRC46-204ENST00000584580 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
LRRC46-204ENST00000584580 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
LRRC46-204ENST00000584580 PABPN1Q86U42 306 aaKnown RBP eCLIP20.49■□□□□ 0.87
LRRC46-204ENST00000584580 BICRAQ9NZM4 1560 aa20.39■□□□□ 0.86
LRRC46-204ENST00000584580 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
LRRC46-204ENST00000584580 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
LRRC46-204ENST00000584580 MROH2BQ7Z745 1585 aa20.23■□□□□ 0.83
LRRC46-204ENST00000584580 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
LRRC46-204ENST00000584580 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
LRRC46-204ENST00000584580 WIZO95785 1651 aa20.06■□□□□ 0.8
LRRC46-204ENST00000584580 TOP2AP11388 1531 aaKnown RBP19.8■□□□□ 0.76
LRRC46-204ENST00000584580 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
LRRC46-204ENST00000584580 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
LRRC46-204ENST00000584580 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.75
LRRC46-204ENST00000584580 CHIC1Q5VXU3 224 aa19.75■□□□□ 0.75
LRRC46-204ENST00000584580 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
LRRC46-204ENST00000584580 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
LRRC46-204ENST00000584580 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
LRRC46-204ENST00000584580 NCAPD3P42695 1498 aa19.57■□□□□ 0.72
LRRC46-204ENST00000584580 CC2D2AQ9P2K1 1620 aa19.51■□□□□ 0.71
LRRC46-204ENST00000584580 HMGXB3Q12766 1538 aa19.5■□□□□ 0.71
LRRC46-204ENST00000584580 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
LRRC46-204ENST00000584580 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
LRRC46-204ENST00000584580 DNAJC5BQ9UF47 199 aa19.18■□□□□ 0.66
LRRC46-204ENST00000584580 FAM9AQ8IZU1 332 aaPredicted RBP19.16■□□□□ 0.66
LRRC46-204ENST00000584580 CFTRP13569 1480 aa19.15■□□□□ 0.66
LRRC46-204ENST00000584580 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
LRRC46-204ENST00000584580 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
LRRC46-204ENST00000584580 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.64
LRRC46-204ENST00000584580 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
LRRC46-204ENST00000584580 NESP48681 1621 aa19■□□□□ 0.63
LRRC46-204ENST00000584580 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
LRRC46-204ENST00000584580 SOGA1O94964 1423 aa18.94■□□□□ 0.62
LRRC46-204ENST00000584580 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
LRRC46-204ENST00000584580 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
LRRC46-204ENST00000584580 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
LRRC46-204ENST00000584580 CUX1P39880 1505 aa18.9■□□□□ 0.62
LRRC46-204ENST00000584580 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
LRRC46-204ENST00000584580 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
LRRC46-204ENST00000584580 BIVM-ERCC5R4GMW8 1640 aa18.86■□□□□ 0.61
LRRC46-204ENST00000584580 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
LRRC46-204ENST00000584580 PDS5BQ9NTI5 1447 aa18.79■□□□□ 0.6
LRRC46-204ENST00000584580 EEA1Q15075 1411 aa18.78■□□□□ 0.6
LRRC46-204ENST00000584580 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.6
LRRC46-204ENST00000584580 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
LRRC46-204ENST00000584580 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
LRRC46-204ENST00000584580 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
LRRC46-204ENST00000584580 TOPBP1Q92547 1522 aa18.68■□□□□ 0.58
LRRC46-204ENST00000584580 URB2Q14146 1524 aaKnown RBP18.67■□□□□ 0.58
LRRC46-204ENST00000584580 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
LRRC46-204ENST00000584580 UBTFP17480 764 aaKnown RBP18.61■□□□□ 0.57
LRRC46-204ENST00000584580 CUX2O14529 1486 aa18.61■□□□□ 0.57
LRRC46-204ENST00000584580 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
LRRC46-204ENST00000584580 RAD54L2Q9Y4B4 1467 aa18.6■□□□□ 0.57
LRRC46-204ENST00000584580 GOLGA3Q08378 1498 aa18.58■□□□□ 0.56
LRRC46-204ENST00000584580 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
LRRC46-204ENST00000584580 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
LRRC46-204ENST00000584580 RAPGEF2Q9Y4G8 1499 aa18.53■□□□□ 0.56
LRRC46-204ENST00000584580 KIF21BO75037 1637 aa18.53■□□□□ 0.56
LRRC46-204ENST00000584580 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.55
LRRC46-204ENST00000584580 ABCA10Q8WWZ4 1543 aa18.5■□□□□ 0.55
LRRC46-204ENST00000584580 IGF1RP08069 1367 aa18.49■□□□□ 0.55
LRRC46-204ENST00000584580 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
LRRC46-204ENST00000584580 CEP162Q5TB80 1403 aa18.46■□□□□ 0.55
LRRC46-204ENST00000584580 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
LRRC46-204ENST00000584580 RANGAP1P46060 587 aaPredicted RBP18.42■□□□□ 0.54
LRRC46-204ENST00000584580 WDR62O43379 1518 aa18.41■□□□□ 0.54
LRRC46-204ENST00000584580 ERICH3Q5RHP9 1530 aa18.41■□□□□ 0.54
LRRC46-204ENST00000584580 CARMIL1Q5VZK9 1371 aa18.4■□□□□ 0.54
LRRC46-204ENST00000584580 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
LRRC46-204ENST00000584580 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
LRRC46-204ENST00000584580 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
LRRC46-204ENST00000584580 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
LRRC46-204ENST00000584580 ABCA5Q8WWZ7 1642 aa18.32■□□□□ 0.52
LRRC46-204ENST00000584580 CLIP1P30622 1438 aa18.32■□□□□ 0.52
LRRC46-204ENST00000584580 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.52
LRRC46-204ENST00000584580 IFT140Q96RY7 1462 aa18.3■□□□□ 0.52
LRRC46-204ENST00000584580 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
LRRC46-204ENST00000584580 PPARGC1BQ86YN6 1023 aaKnown RBP18.25■□□□□ 0.51
LRRC46-204ENST00000584580 CUL7Q14999 1698 aa18.24■□□□□ 0.51
LRRC46-204ENST00000584580 PCGF6Q9BYE7 350 aa18.21■□□□□ 0.5
LRRC46-204ENST00000584580 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
LRRC46-204ENST00000584580 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
LRRC46-204ENST00000584580 EIF4G3O43432 1585 aaKnown RBP18.15■□□□□ 0.5
LRRC46-204ENST00000584580 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
LRRC46-204ENST00000584580 TTBK1Q5TCY1 1321 aaPredicted RBP18.12■□□□□ 0.49
LRRC46-204ENST00000584580 VPS8Q8N3P4 1428 aa18.12■□□□□ 0.49
LRRC46-204ENST00000584580 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
LRRC46-204ENST00000584580 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms