RNA–Protein interactions for RNA: ENST00000584385.5

DHX40-210, Transcript of DEAH-box helicase 40, humanhuman

TSL 3

Gene DHX40, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-210ENST00000584385 NISCHQ9Y2I1 1504 aa49.41■■■■■ 5.5
DHX40-210ENST00000584385 CCDC180Q9P1Z9 1646 aa43.77■■■■■ 4.6
DHX40-210ENST00000584385 ABCC9O60706 1549 aa42.73■■■■■ 4.43
DHX40-210ENST00000584385 DCAF8L2P0C7V8 631 aa41.46■■■■■ 4.23
DHX40-210ENST00000584385 NACADO15069 1562 aa41.19■■■■■ 4.18
DHX40-210ENST00000584385 RB1CC1Q8TDY2 1594 aa41.19■■■■■ 4.18
DHX40-210ENST00000584385 ZCCHC6Q5VYS8 1495 aaKnown RBP41.15■■■■■ 4.18
DHX40-210ENST00000584385 MYO15BQ96JP2 1530 aa40.98■■■■■ 4.15
DHX40-210ENST00000584385 DCAF1Q9Y4B6 1507 aa40.88■■■■■ 4.13
DHX40-210ENST00000584385 UNC13AQ9UPW8 1703 aa40.09■■■■■ 4.01
DHX40-210ENST00000584385 PABPN1Q86U42 306 aaKnown RBP eCLIP40.05■■■■■ 4
DHX40-210ENST00000584385 SCRIBQ14160 1630 aa39.99■■■■□ 3.99
DHX40-210ENST00000584385 BICRAQ9NZM4 1560 aa39.83■■■■□ 3.97
DHX40-210ENST00000584385 SHROOM4Q9ULL8 1493 aa39.51■■■■□ 3.92
DHX40-210ENST00000584385 DNAJC5BQ9UF47 199 aa39.04■■■■□ 3.84
DHX40-210ENST00000584385 EIF4G1Q04637 1599 aaKnown RBP38.82■■■■□ 3.8
DHX40-210ENST00000584385 CC2D2AQ9P2K1 1620 aa38.6■■■■□ 3.77
DHX40-210ENST00000584385 CECR2Q9BXF3 1484 aa38.45■■■■□ 3.75
DHX40-210ENST00000584385 BAZ1AQ9NRL2 1556 aaPredicted RBP38.3■■■■□ 3.72
DHX40-210ENST00000584385 SMARCA4P51532 1647 aa38.26■■■■□ 3.71
DHX40-210ENST00000584385 MROH2BQ7Z745 1585 aa38.06■■■■□ 3.68
DHX40-210ENST00000584385 ATAD2BQ9ULI0 1458 aa38.05■■■■□ 3.68
DHX40-210ENST00000584385 SMARCA2P51531 1590 aa38.04■■■■□ 3.68
DHX40-210ENST00000584385 NCAPD3P42695 1498 aa38.02■■■■□ 3.68
DHX40-210ENST00000584385 PEG3Q9GZU2 1588 aa37.86■■■■□ 3.65
DHX40-210ENST00000584385 HMGXB3Q12766 1538 aa37.79■■■■□ 3.64
DHX40-210ENST00000584385 BAZ1BQ9UIG0 1483 aaKnown RBP37.78■■■■□ 3.64
DHX40-210ENST00000584385 RSF1Q96T23 1441 aaPredicted RBP37.75■■■■□ 3.63
DHX40-210ENST00000584385 WIZO95785 1651 aa37.64■■■■□ 3.62
DHX40-210ENST00000584385 TOP2AP11388 1531 aaKnown RBP37.28■■■■□ 3.56
DHX40-210ENST00000584385 SUPT5HO00267 1087 aaKnown RBP37.11■■■■□ 3.53
DHX40-210ENST00000584385 NESP48681 1621 aa36.99■■■■□ 3.51
DHX40-210ENST00000584385 CADPSQ9ULU8 1353 aa36.96■■■■□ 3.51
DHX40-210ENST00000584385 LAMC3Q9Y6N6 1575 aa36.95■■■■□ 3.51
DHX40-210ENST00000584385 ERCC6Q03468 1493 aa36.89■■■■□ 3.5
DHX40-210ENST00000584385 CCDC88BA6NC98 1476 aa36.88■■■■□ 3.5
DHX40-210ENST00000584385 PDS5BQ9NTI5 1447 aa36.8■■■■□ 3.48
DHX40-210ENST00000584385 CFTRP13569 1480 aa36.74■■■■□ 3.47
DHX40-210ENST00000584385 KIF21AQ7Z4S6 1674 aa36.51■■■■□ 3.43
DHX40-210ENST00000584385 FANCD2Q9BXW9 1451 aa36.5■■■■□ 3.43
DHX40-210ENST00000584385 CEP164Q9UPV0 1460 aa36.44■■■■□ 3.42
DHX40-210ENST00000584385 CUX2O14529 1486 aa36.36■■■■□ 3.41
DHX40-210ENST00000584385 PRDM2Q13029 1718 aa36.35■■■■□ 3.41
DHX40-210ENST00000584385 MRC2Q9UBG0 1479 aa36.34■■■■□ 3.41
DHX40-210ENST00000584385 THOC2Q8NI27 1593 aaKnown RBP36.32■■■■□ 3.4
DHX40-210ENST00000584385 WDR62O43379 1518 aa36.14■■■■□ 3.38
DHX40-210ENST00000584385 URB2Q14146 1524 aaKnown RBP36.07■■■■□ 3.36
DHX40-210ENST00000584385 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
DHX40-210ENST00000584385 TOPBP1Q92547 1522 aa35.92■■■■□ 3.34
DHX40-210ENST00000584385 DNMBPQ6XZF7 1577 aa35.88■■■■□ 3.33
DHX40-210ENST00000584385 CUX1P39880 1505 aa35.68■■■■□ 3.3
DHX40-210ENST00000584385 IFT140Q96RY7 1462 aa35.68■■■■□ 3.3
DHX40-210ENST00000584385 WRNQ14191 1432 aaPredicted RBP eCLIP35.63■■■■□ 3.29
DHX40-210ENST00000584385 POLA1P09884 1462 aaPredicted RBP35.61■■■■□ 3.29
DHX40-210ENST00000584385 SOGA1O94964 1423 aa35.57■■■■□ 3.29
DHX40-210ENST00000584385 FGD5Q6ZNL6 1462 aa35.57■■■■□ 3.28
DHX40-210ENST00000584385 RAD54L2Q9Y4B4 1467 aa35.48■■■■□ 3.27
DHX40-210ENST00000584385 TARBP1Q13395 1621 aaKnown RBP35.45■■■■□ 3.27
DHX40-210ENST00000584385 TOP2BQ02880 1626 aa35.44■■■■□ 3.26
DHX40-210ENST00000584385 ZNF608Q9ULD9 1512 aaPredicted RBP35.44■■■■□ 3.26
DHX40-210ENST00000584385 SYNJ1O43426 1573 aa35.41■■■■□ 3.26
DHX40-210ENST00000584385 BIVM-ERCC5R4GMW8 1640 aa35.4■■■■□ 3.26
DHX40-210ENST00000584385 TDRD9Q8NDG6 1382 aaKnown RBP35.34■■■■□ 3.25
DHX40-210ENST00000584385 AQRO60306 1485 aaKnown RBP eCLIP35.33■■■■□ 3.25
DHX40-210ENST00000584385 EIF4G3O43432 1585 aaKnown RBP35.27■■■■□ 3.24
DHX40-210ENST00000584385 ABCA10Q8WWZ4 1543 aa35.24■■■■□ 3.23
DHX40-210ENST00000584385 WDR97A6NE52 1622 aa35.22■■■■□ 3.23
DHX40-210ENST00000584385 GAPVD1Q14C86 1478 aa35.13■■■■□ 3.21
DHX40-210ENST00000584385 GRIN2BQ13224 1484 aa35.09■■■■□ 3.21
DHX40-210ENST00000584385 DNAJC5Q9H3Z4 198 aa35.09■■■■□ 3.21
DHX40-210ENST00000584385 TRIM41Q8WV44 630 aa35.07■■■■□ 3.2
DHX40-210ENST00000584385 OSCARQ8IYS5 282 aa35.04■■■■□ 3.2
DHX40-210ENST00000584385 FBLN2P98095 1184 aa35.02■■■■□ 3.2
DHX40-210ENST00000584385 ABCA5Q8WWZ7 1642 aa35■■■■□ 3.19
DHX40-210ENST00000584385 SNAPC4Q5SXM2 1469 aa34.97■■■■□ 3.19
DHX40-210ENST00000584385 MAGI1Q96QZ7 1491 aaPredicted RBP34.97■■■■□ 3.19
DHX40-210ENST00000584385 CHMP7Q8WUX9 453 aaPredicted RBP34.95■■■■□ 3.19
DHX40-210ENST00000584385 PBRM1Q86U86 1689 aa34.92■■■■□ 3.18
DHX40-210ENST00000584385 KIF27Q86VH2 1401 aa34.91■■■■□ 3.18
DHX40-210ENST00000584385 ERICH3Q5RHP9 1530 aa34.83■■■■□ 3.17
DHX40-210ENST00000584385 SYNJ2O15056 1496 aa34.83■■■■□ 3.17
DHX40-210ENST00000584385 CHD1O14646 1710 aa34.78■■■■□ 3.16
DHX40-210ENST00000584385 FHAD1B1AJZ9 1412 aa34.74■■■■□ 3.15
DHX40-210ENST00000584385 IGF1RP08069 1367 aa34.72■■■■□ 3.15
DHX40-210ENST00000584385 CHIC1Q5VXU3 224 aa34.69■■■■□ 3.14
DHX40-210ENST00000584385 ADAMTS12P58397 1594 aa34.67■■■■□ 3.14
DHX40-210ENST00000584385 GRIN2AQ12879 1464 aa34.61■■■■□ 3.13
DHX40-210ENST00000584385 CARMIL1Q5VZK9 1371 aa34.55■■■■□ 3.12
DHX40-210ENST00000584385 RUSC2Q8N2Y8 1516 aa34.55■■■■□ 3.12
DHX40-210ENST00000584385 CUL7Q14999 1698 aa34.53■■■■□ 3.12
DHX40-210ENST00000584385 NUP160Q12769 1436 aa34.43■■■■□ 3.1
DHX40-210ENST00000584385 CLASP1Q7Z460 1538 aa34.41■■■■□ 3.1
DHX40-210ENST00000584385 CSRNP3Q8WYN3 585 aa34.37■■■■□ 3.09
DHX40-210ENST00000584385 EEA1Q15075 1411 aa34.37■■■■□ 3.09
DHX40-210ENST00000584385 CEP170Q5SW79 1584 aa34.36■■■■□ 3.09
DHX40-210ENST00000584385 RAPGEF2Q9Y4G8 1499 aa34.33■■■■□ 3.09
DHX40-210ENST00000584385 FAM9AQ8IZU1 332 aaPredicted RBP34.31■■■■□ 3.08
DHX40-210ENST00000584385 ARHGEF11O15085 1522 aa34.3■■■■□ 3.08
DHX40-210ENST00000584385 RIMBP3CA6NJZ7 1639 aa34.25■■■■□ 3.07
DHX40-210ENST00000584385 RIMBP3BA6NNM3 1639 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms