RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 NISCHQ9Y2I1 1504 aa35.99■■■■□ 3.35
SCN4A-203ENST00000584310 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
SCN4A-203ENST00000584310 ABCC9O60706 1549 aa31.65■■■□□ 2.66
SCN4A-203ENST00000584310 DCAF8L2P0C7V8 631 aa30.41■■■□□ 2.46
SCN4A-203ENST00000584310 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
SCN4A-203ENST00000584310 NACADO15069 1562 aa30.3■■■□□ 2.44
SCN4A-203ENST00000584310 MYO15BQ96JP2 1530 aa30.02■■■□□ 2.4
SCN4A-203ENST00000584310 ZCCHC6Q5VYS8 1495 aaKnown RBP29.92■■■□□ 2.38
SCN4A-203ENST00000584310 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
SCN4A-203ENST00000584310 PABPN1Q86U42 306 aaKnown RBP eCLIP29.56■■■□□ 2.32
SCN4A-203ENST00000584310 UNC13AQ9UPW8 1703 aa29.42■■■□□ 2.3
SCN4A-203ENST00000584310 BICRAQ9NZM4 1560 aa29.26■■■□□ 2.28
SCN4A-203ENST00000584310 SCRIBQ14160 1630 aa29.26■■■□□ 2.27
SCN4A-203ENST00000584310 SHROOM4Q9ULL8 1493 aa29.2■■■□□ 2.26
SCN4A-203ENST00000584310 DNAJC5BQ9UF47 199 aa29.1■■■□□ 2.25
SCN4A-203ENST00000584310 EIF4G1Q04637 1599 aaKnown RBP28.64■■■□□ 2.18
SCN4A-203ENST00000584310 CC2D2AQ9P2K1 1620 aa28.56■■■□□ 2.16
SCN4A-203ENST00000584310 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
SCN4A-203ENST00000584310 BAZ1AQ9NRL2 1556 aaPredicted RBP27.99■■■□□ 2.07
SCN4A-203ENST00000584310 SMARCA4P51532 1647 aa27.95■■■□□ 2.06
SCN4A-203ENST00000584310 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
SCN4A-203ENST00000584310 SMARCA2P51531 1590 aa27.93■■■□□ 2.06
SCN4A-203ENST00000584310 ATAD2BQ9ULI0 1458 aa27.89■■■□□ 2.06
SCN4A-203ENST00000584310 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
SCN4A-203ENST00000584310 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
SCN4A-203ENST00000584310 MROH2BQ7Z745 1585 aa27.68■■■□□ 2.02
SCN4A-203ENST00000584310 PEG3Q9GZU2 1588 aa27.66■■■□□ 2.02
SCN4A-203ENST00000584310 ERCC6Q03468 1493 aa27.45■■□□□ 1.99
SCN4A-203ENST00000584310 WIZO95785 1651 aa27.34■■□□□ 1.97
SCN4A-203ENST00000584310 RSF1Q96T23 1441 aaPredicted RBP27.33■■□□□ 1.97
SCN4A-203ENST00000584310 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
SCN4A-203ENST00000584310 NESP48681 1621 aa27.23■■□□□ 1.95
SCN4A-203ENST00000584310 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
SCN4A-203ENST00000584310 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
SCN4A-203ENST00000584310 CUX2O14529 1486 aa27.16■■□□□ 1.94
SCN4A-203ENST00000584310 TOP2AP11388 1531 aaKnown RBP27.14■■□□□ 1.94
SCN4A-203ENST00000584310 CFTRP13569 1480 aa26.89■■□□□ 1.9
SCN4A-203ENST00000584310 KIF21AQ7Z4S6 1674 aa26.87■■□□□ 1.89
SCN4A-203ENST00000584310 CEP164Q9UPV0 1460 aa26.86■■□□□ 1.89
SCN4A-203ENST00000584310 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
SCN4A-203ENST00000584310 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
SCN4A-203ENST00000584310 MRC2Q9UBG0 1479 aa26.83■■□□□ 1.89
SCN4A-203ENST00000584310 CCDC88BA6NC98 1476 aa26.8■■□□□ 1.88
SCN4A-203ENST00000584310 WDR62O43379 1518 aa26.67■■□□□ 1.86
SCN4A-203ENST00000584310 SUPT5HO00267 1087 aaKnown RBP26.65■■□□□ 1.86
SCN4A-203ENST00000584310 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
SCN4A-203ENST00000584310 DNAJC5Q9H3Z4 198 aa26.56■■□□□ 1.84
SCN4A-203ENST00000584310 ABCC8Q09428 1581 aa26.47■■□□□ 1.83
SCN4A-203ENST00000584310 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
SCN4A-203ENST00000584310 TOPBP1Q92547 1522 aa26.33■■□□□ 1.81
SCN4A-203ENST00000584310 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
SCN4A-203ENST00000584310 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
SCN4A-203ENST00000584310 OSCARQ8IYS5 282 aa26.09■■□□□ 1.77
SCN4A-203ENST00000584310 POLA1P09884 1462 aaPredicted RBP26.09■■□□□ 1.77
SCN4A-203ENST00000584310 SOGA1O94964 1423 aa26.06■■□□□ 1.76
SCN4A-203ENST00000584310 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
SCN4A-203ENST00000584310 FGD5Q6ZNL6 1462 aa26.01■■□□□ 1.75
SCN4A-203ENST00000584310 CUX1P39880 1505 aa25.99■■□□□ 1.75
SCN4A-203ENST00000584310 EIF4G3O43432 1585 aaKnown RBP25.97■■□□□ 1.75
SCN4A-203ENST00000584310 TARBP1Q13395 1621 aaKnown RBP25.96■■□□□ 1.75
SCN4A-203ENST00000584310 AQRO60306 1485 aaKnown RBP eCLIP25.95■■□□□ 1.74
SCN4A-203ENST00000584310 RAD54L2Q9Y4B4 1467 aa25.95■■□□□ 1.74
SCN4A-203ENST00000584310 WDR97A6NE52 1622 aa25.91■■□□□ 1.74
SCN4A-203ENST00000584310 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
SCN4A-203ENST00000584310 FBLN2P98095 1184 aa25.88■■□□□ 1.73
SCN4A-203ENST00000584310 WRNQ14191 1432 aaPredicted RBP eCLIP25.88■■□□□ 1.73
SCN4A-203ENST00000584310 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
SCN4A-203ENST00000584310 CHMP7Q8WUX9 453 aaPredicted RBP25.77■■□□□ 1.72
SCN4A-203ENST00000584310 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
SCN4A-203ENST00000584310 ABCA10Q8WWZ4 1543 aa25.75■■□□□ 1.71
SCN4A-203ENST00000584310 GAPVD1Q14C86 1478 aa25.74■■□□□ 1.71
SCN4A-203ENST00000584310 MAGI1Q96QZ7 1491 aaPredicted RBP25.74■■□□□ 1.71
SCN4A-203ENST00000584310 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
SCN4A-203ENST00000584310 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.71
SCN4A-203ENST00000584310 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
SCN4A-203ENST00000584310 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
SCN4A-203ENST00000584310 CHD1O14646 1710 aa25.63■■□□□ 1.69
SCN4A-203ENST00000584310 SYNJ2O15056 1496 aa25.63■■□□□ 1.69
SCN4A-203ENST00000584310 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
SCN4A-203ENST00000584310 PBRM1Q86U86 1689 aa25.57■■□□□ 1.68
SCN4A-203ENST00000584310 ARHGEF11O15085 1522 aa25.51■■□□□ 1.67
SCN4A-203ENST00000584310 RIMBP3CA6NJZ7 1639 aa25.48■■□□□ 1.67
SCN4A-203ENST00000584310 RIMBP3BA6NNM3 1639 aa25.48■■□□□ 1.67
SCN4A-203ENST00000584310 RIMBP3Q9UFD9 1639 aa25.48■■□□□ 1.67
SCN4A-203ENST00000584310 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
SCN4A-203ENST00000584310 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
SCN4A-203ENST00000584310 KIF27Q86VH2 1401 aa25.42■■□□□ 1.66
SCN4A-203ENST00000584310 CYB5RLQ6IPT4 315 aa25.41■■□□□ 1.66
SCN4A-203ENST00000584310 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
SCN4A-203ENST00000584310 ADAMTS12P58397 1594 aa25.39■■□□□ 1.66
SCN4A-203ENST00000584310 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
SCN4A-203ENST00000584310 NUP160Q12769 1436 aa25.27■■□□□ 1.64
SCN4A-203ENST00000584310 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
SCN4A-203ENST00000584310 IGF1RP08069 1367 aa25.22■■□□□ 1.63
SCN4A-203ENST00000584310 CUL7Q14999 1698 aa25.2■■□□□ 1.62
SCN4A-203ENST00000584310 CEP170Q5SW79 1584 aa25.18■■□□□ 1.62
SCN4A-203ENST00000584310 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
SCN4A-203ENST00000584310 JPH4Q96JJ6 628 aa25.12■■□□□ 1.61
SCN4A-203ENST00000584310 TRHP20396 242 aaPredicted RBP25.07■■□□□ 1.6
SCN4A-203ENST00000584310 PRG4Q92954 1404 aaPredicted RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms