RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
SUPT6H-208ENST00000583340 CCDC180Q9P1Z9 1646 aa18.38■□□□□ 0.53
SUPT6H-208ENST00000583340 ABCC9O60706 1549 aa17.97■□□□□ 0.47
SUPT6H-208ENST00000583340 RB1CC1Q8TDY2 1594 aa17.34■□□□□ 0.37
SUPT6H-208ENST00000583340 NACADO15069 1562 aa17.31■□□□□ 0.36
SUPT6H-208ENST00000583340 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
SUPT6H-208ENST00000583340 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.34
SUPT6H-208ENST00000583340 ZCCHC6Q5VYS8 1495 aaKnown RBP17.17■□□□□ 0.34
SUPT6H-208ENST00000583340 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
SUPT6H-208ENST00000583340 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
SUPT6H-208ENST00000583340 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.288e-7■■■□□ 17
SUPT6H-208ENST00000583340 SCRIBQ14160 1630 aa16.73■□□□□ 0.27
SUPT6H-208ENST00000583340 BICRAQ9NZM4 1560 aa16.7■□□□□ 0.26
SUPT6H-208ENST00000583340 SHROOM4Q9ULL8 1493 aa16.7■□□□□ 0.26
SUPT6H-208ENST00000583340 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
SUPT6H-208ENST00000583340 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
SUPT6H-208ENST00000583340 CC2D2AQ9P2K1 1620 aa16.25■□□□□ 0.19
SUPT6H-208ENST00000583340 CECR2Q9BXF3 1484 aa16.18■□□□□ 0.18
SUPT6H-208ENST00000583340 BAZ1AQ9NRL2 1556 aaPredicted RBP16.03■□□□□ 0.16
SUPT6H-208ENST00000583340 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
SUPT6H-208ENST00000583340 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
SUPT6H-208ENST00000583340 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
SUPT6H-208ENST00000583340 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
SUPT6H-208ENST00000583340 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
SUPT6H-208ENST00000583340 PEG3Q9GZU2 1588 aa15.86■□□□□ 0.13
SUPT6H-208ENST00000583340 BAZ1BQ9UIG0 1483 aaKnown RBP15.84■□□□□ 0.13
SUPT6H-208ENST00000583340 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
SUPT6H-208ENST00000583340 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
SUPT6H-208ENST00000583340 WIZO95785 1651 aa15.67■□□□□ 0.1
SUPT6H-208ENST00000583340 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
SUPT6H-208ENST00000583340 TOP2AP11388 1531 aaKnown RBP15.57■□□□□ 0.08
SUPT6H-208ENST00000583340 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
SUPT6H-208ENST00000583340 NESP48681 1621 aa15.5■□□□□ 0.07
SUPT6H-208ENST00000583340 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
SUPT6H-208ENST00000583340 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
SUPT6H-208ENST00000583340 CUX2O14529 1486 aa15.42■□□□□ 0.06
SUPT6H-208ENST00000583340 CFTRP13569 1480 aa15.38■□□□□ 0.05
SUPT6H-208ENST00000583340 CCDC88BA6NC98 1476 aa15.35■□□□□ 0.05
SUPT6H-208ENST00000583340 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
SUPT6H-208ENST00000583340 CEP164Q9UPV0 1460 aa15.32■□□□□ 0.04
SUPT6H-208ENST00000583340 THOC2Q8NI27 1593 aaKnown RBP15.3■□□□□ 0.04
SUPT6H-208ENST00000583340 FANCD2Q9BXW9 1451 aa15.3■□□□□ 0.04
SUPT6H-208ENST00000583340 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
SUPT6H-208ENST00000583340 SUPT5HO00267 1087 aaKnown RBP15.28■□□□□ 0.04
SUPT6H-208ENST00000583340 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
SUPT6H-208ENST00000583340 WDR62O43379 1518 aa15.22■□□□□ 0.03
SUPT6H-208ENST00000583340 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
SUPT6H-208ENST00000583340 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
SUPT6H-208ENST00000583340 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
SUPT6H-208ENST00000583340 TOPBP1Q92547 1522 aa15.04■□□□□ -0
SUPT6H-208ENST00000583340 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
SUPT6H-208ENST00000583340 DNAJC5Q9H3Z4 198 aa14.93□□□□□ -0.02
SUPT6H-208ENST00000583340 POLA1P09884 1462 aaPredicted RBP14.9□□□□□ -0.02
SUPT6H-208ENST00000583340 CUX1P39880 1505 aa14.88□□□□□ -0.03
SUPT6H-208ENST00000583340 SOGA1O94964 1423 aa14.87□□□□□ -0.03
SUPT6H-208ENST00000583340 FGD5Q6ZNL6 1462 aa14.87□□□□□ -0.03
SUPT6H-208ENST00000583340 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
SUPT6H-208ENST00000583340 ZNF608Q9ULD9 1512 aaPredicted RBP14.84□□□□□ -0.03
SUPT6H-208ENST00000583340 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
SUPT6H-208ENST00000583340 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.03
SUPT6H-208ENST00000583340 EIF4G3O43432 1585 aaKnown RBP14.82□□□□□ -0.04
SUPT6H-208ENST00000583340 RAD54L2Q9Y4B4 1467 aa14.81□□□□□ -0.04
SUPT6H-208ENST00000583340 TOP2BQ02880 1626 aa14.78□□□□□ -0.04
SUPT6H-208ENST00000583340 AQRO60306 1485 aaKnown RBP eCLIP14.78□□□□□ -0.04
SUPT6H-208ENST00000583340 OSCARQ8IYS5 282 aa14.78□□□□□ -0.04
SUPT6H-208ENST00000583340 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.05
SUPT6H-208ENST00000583340 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
SUPT6H-208ENST00000583340 ABCA10Q8WWZ4 1543 aa14.75□□□□□ -0.05
SUPT6H-208ENST00000583340 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
SUPT6H-208ENST00000583340 GRIN2BQ13224 1484 aa14.72□□□□□ -0.05
SUPT6H-208ENST00000583340 GAPVD1Q14C86 1478 aa14.7□□□□□ -0.06
SUPT6H-208ENST00000583340 MAGI1Q96QZ7 1491 aaPredicted RBP14.7□□□□□ -0.06
SUPT6H-208ENST00000583340 FBLN2P98095 1184 aa14.68□□□□□ -0.06
SUPT6H-208ENST00000583340 SNAPC4Q5SXM2 1469 aa14.68□□□□□ -0.06
SUPT6H-208ENST00000583340 ABCA5Q8WWZ7 1642 aa14.66□□□□□ -0.06
SUPT6H-208ENST00000583340 CHMP7Q8WUX9 453 aaPredicted RBP14.65□□□□□ -0.06
SUPT6H-208ENST00000583340 PBRM1Q86U86 1689 aa14.64□□□□□ -0.07
SUPT6H-208ENST00000583340 SYNJ2O15056 1496 aa14.63□□□□□ -0.07
SUPT6H-208ENST00000583340 CHD1O14646 1710 aa14.62□□□□□ -0.07
SUPT6H-208ENST00000583340 ERICH3Q5RHP9 1530 aa14.59□□□□□ -0.07
SUPT6H-208ENST00000583340 KIF27Q86VH2 1401 aa14.57□□□□□ -0.08
SUPT6H-208ENST00000583340 FHAD1B1AJZ9 1412 aa14.56□□□□□ -0.08
SUPT6H-208ENST00000583340 ADAMTS12P58397 1594 aa14.54□□□□□ -0.08
SUPT6H-208ENST00000583340 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
SUPT6H-208ENST00000583340 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
SUPT6H-208ENST00000583340 ARHGEF11O15085 1522 aa14.48□□□□□ -0.09
SUPT6H-208ENST00000583340 CLASP1Q7Z460 1538 aa14.47□□□□□ -0.09
SUPT6H-208ENST00000583340 RIMBP3CA6NJZ7 1639 aa14.47□□□□□ -0.09
SUPT6H-208ENST00000583340 RIMBP3BA6NNM3 1639 aa14.47□□□□□ -0.09
SUPT6H-208ENST00000583340 RIMBP3Q9UFD9 1639 aa14.47□□□□□ -0.09
SUPT6H-208ENST00000583340 CUL7Q14999 1698 aa14.46□□□□□ -0.1
SUPT6H-208ENST00000583340 NUP160Q12769 1436 aa14.44□□□□□ -0.1
SUPT6H-208ENST00000583340 IGF1RP08069 1367 aa14.44□□□□□ -0.1
SUPT6H-208ENST00000583340 CARMIL1Q5VZK9 1371 aa14.39□□□□□ -0.11
SUPT6H-208ENST00000583340 CEP170Q5SW79 1584 aa14.39□□□□□ -0.11
SUPT6H-208ENST00000583340 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
SUPT6H-208ENST00000583340 ARAP1Q96P48 1450 aa14.34□□□□□ -0.11
SUPT6H-208ENST00000583340 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
SUPT6H-208ENST00000583340 RUSC2Q8N2Y8 1516 aa14.31□□□□□ -0.12
SUPT6H-208ENST00000583340 KIAA0586Q9BVV6 1533 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms