RNA–Protein interactions for RNA: ENST00000583218.5

CSF3-209, Transcript of colony stimulating factor 3, humanhuman

TSL 2

Gene CSF3, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3-209ENST00000583218 NISCHQ9Y2I1 1504 aa38.87■■■■□ 3.81
CSF3-209ENST00000583218 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
CSF3-209ENST00000583218 ABCC9O60706 1549 aa32.97■■■□□ 2.87
CSF3-209ENST00000583218 ZCCHC6Q5VYS8 1495 aaKnown RBP32.52■■■□□ 2.8
CSF3-209ENST00000583218 DCAF8L2P0C7V8 631 aa32.22■■■□□ 2.75
CSF3-209ENST00000583218 DCAF1Q9Y4B6 1507 aa32.21■■■□□ 2.75
CSF3-209ENST00000583218 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
CSF3-209ENST00000583218 NACADO15069 1562 aa32.11■■■□□ 2.73
CSF3-209ENST00000583218 RB1CC1Q8TDY2 1594 aa31.99■■■□□ 2.71
CSF3-209ENST00000583218 SCRIBQ14160 1630 aa31.33■■■□□ 2.61
CSF3-209ENST00000583218 UNC13AQ9UPW8 1703 aa31.16■■■□□ 2.58
CSF3-209ENST00000583218 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
CSF3-209ENST00000583218 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
CSF3-209ENST00000583218 PABPN1Q86U42 306 aaKnown RBP eCLIP30.9■■■□□ 2.54
CSF3-209ENST00000583218 CECR2Q9BXF3 1484 aa30.19■■■□□ 2.42
CSF3-209ENST00000583218 EIF4G1Q04637 1599 aaKnown RBP30.12■■■□□ 2.41
CSF3-209ENST00000583218 BAZ1AQ9NRL2 1556 aaPredicted RBP30.1■■■□□ 2.41
CSF3-209ENST00000583218 SMARCA4P51532 1647 aa30.02■■■□□ 2.4
CSF3-209ENST00000583218 MROH2BQ7Z745 1585 aa29.95■■■□□ 2.39
CSF3-209ENST00000583218 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
CSF3-209ENST00000583218 CC2D2AQ9P2K1 1620 aa29.83■■■□□ 2.37
CSF3-209ENST00000583218 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
CSF3-209ENST00000583218 ATAD2BQ9ULI0 1458 aa29.72■■■□□ 2.35
CSF3-209ENST00000583218 PEG3Q9GZU2 1588 aa29.72■■■□□ 2.35
CSF3-209ENST00000583218 DNAJC5BQ9UF47 199 aa29.66■■■□□ 2.34
CSF3-209ENST00000583218 WIZO95785 1651 aa29.63■■■□□ 2.33
CSF3-209ENST00000583218 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
CSF3-209ENST00000583218 SUPT5HO00267 1087 aaKnown RBP29.54■■■□□ 2.32
CSF3-209ENST00000583218 HMGXB3Q12766 1538 aa29.54■■■□□ 2.32
CSF3-209ENST00000583218 BAZ1BQ9UIG0 1483 aaKnown RBP29.53■■■□□ 2.32
CSF3-209ENST00000583218 TOP2AP11388 1531 aaKnown RBP29.4■■■□□ 2.3
CSF3-209ENST00000583218 CCDC88BA6NC98 1476 aa29.04■■■□□ 2.24
CSF3-209ENST00000583218 CADPSQ9ULU8 1353 aa28.79■■■□□ 2.2
CSF3-209ENST00000583218 CFTRP13569 1480 aa28.74■■■□□ 2.19
CSF3-209ENST00000583218 LAMC3Q9Y6N6 1575 aa28.73■■■□□ 2.19
CSF3-209ENST00000583218 NESP48681 1621 aa28.69■■■□□ 2.18
CSF3-209ENST00000583218 PDS5BQ9NTI5 1447 aa28.55■■■□□ 2.16
CSF3-209ENST00000583218 PRDM2Q13029 1718 aa28.51■■■□□ 2.15
CSF3-209ENST00000583218 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
CSF3-209ENST00000583218 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
CSF3-209ENST00000583218 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
CSF3-209ENST00000583218 KIF21AQ7Z4S6 1674 aa28.33■■■□□ 2.13
CSF3-209ENST00000583218 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
CSF3-209ENST00000583218 WRNQ14191 1432 aaPredicted RBP eCLIP28.15■■■□□ 2.1
CSF3-209ENST00000583218 ABCC8Q09428 1581 aa28.15■■■□□ 2.1
CSF3-209ENST00000583218 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
CSF3-209ENST00000583218 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
CSF3-209ENST00000583218 WDR62O43379 1518 aa28.09■■■□□ 2.09
CSF3-209ENST00000583218 DNMBPQ6XZF7 1577 aa28.09■■■□□ 2.09
CSF3-209ENST00000583218 CUX1P39880 1505 aa28.08■■■□□ 2.08
CSF3-209ENST00000583218 TOPBP1Q92547 1522 aa28.07■■■□□ 2.08
CSF3-209ENST00000583218 SYNJ1O43426 1573 aa28.01■■■□□ 2.07
CSF3-209ENST00000583218 TOP2BQ02880 1626 aa28■■■□□ 2.07
CSF3-209ENST00000583218 BIVM-ERCC5R4GMW8 1640 aa27.96■■■□□ 2.07
CSF3-209ENST00000583218 CHIC1Q5VXU3 224 aa27.92■■■□□ 2.06
CSF3-209ENST00000583218 TRIM41Q8WV44 630 aa27.9■■■□□ 2.06
CSF3-209ENST00000583218 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.06
CSF3-209ENST00000583218 CUX2O14529 1486 aa27.88■■■□□ 2.05
CSF3-209ENST00000583218 POLA1P09884 1462 aaPredicted RBP27.87■■■□□ 2.05
CSF3-209ENST00000583218 SOGA1O94964 1423 aa27.77■■■□□ 2.04
CSF3-209ENST00000583218 IFT140Q96RY7 1462 aa27.76■■■□□ 2.04
CSF3-209ENST00000583218 RAD54L2Q9Y4B4 1467 aa27.73■■■□□ 2.03
CSF3-209ENST00000583218 TARBP1Q13395 1621 aaKnown RBP27.69■■■□□ 2.02
CSF3-209ENST00000583218 ABCA10Q8WWZ4 1543 aa27.66■■■□□ 2.02
CSF3-209ENST00000583218 WDR97A6NE52 1622 aa27.59■■■□□ 2.01
CSF3-209ENST00000583218 ZNF608Q9ULD9 1512 aaPredicted RBP27.55■■■□□ 2
CSF3-209ENST00000583218 KIF27Q86VH2 1401 aa27.53■■■□□ 2
CSF3-209ENST00000583218 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
CSF3-209ENST00000583218 ABCA5Q8WWZ7 1642 aa27.48■■□□□ 1.99
CSF3-209ENST00000583218 EIF4G3O43432 1585 aaKnown RBP27.48■■□□□ 1.99
CSF3-209ENST00000583218 AQRO60306 1485 aaKnown RBP eCLIP27.47■■□□□ 1.99
CSF3-209ENST00000583218 GAPVD1Q14C86 1478 aa27.47■■□□□ 1.99
CSF3-209ENST00000583218 EEA1Q15075 1411 aa27.41■■□□□ 1.98
CSF3-209ENST00000583218 GRIN2BQ13224 1484 aa27.39■■□□□ 1.98
CSF3-209ENST00000583218 RUSC2Q8N2Y8 1516 aa27.39■■□□□ 1.98
CSF3-209ENST00000583218 ERICH3Q5RHP9 1530 aa27.34■■□□□ 1.97
CSF3-209ENST00000583218 PBRM1Q86U86 1689 aa27.31■■□□□ 1.96
CSF3-209ENST00000583218 IGF1RP08069 1367 aa27.3■■□□□ 1.96
CSF3-209ENST00000583218 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
CSF3-209ENST00000583218 SNAPC4Q5SXM2 1469 aa27.26■■□□□ 1.95
CSF3-209ENST00000583218 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
CSF3-209ENST00000583218 CSRNP3Q8WYN3 585 aa27.25■■□□□ 1.95
CSF3-209ENST00000583218 CUL7Q14999 1698 aa27.2■■□□□ 1.94
CSF3-209ENST00000583218 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
CSF3-209ENST00000583218 FHAD1B1AJZ9 1412 aa27.18■■□□□ 1.94
CSF3-209ENST00000583218 CARMIL1Q5VZK9 1371 aa27.16■■□□□ 1.94
CSF3-209ENST00000583218 SYNJ2O15056 1496 aa27.14■■□□□ 1.94
CSF3-209ENST00000583218 PRXQ9BXM0 1461 aa27.13■■□□□ 1.93
CSF3-209ENST00000583218 RAPGEF2Q9Y4G8 1499 aa27.08■■□□□ 1.93
CSF3-209ENST00000583218 CHMP7Q8WUX9 453 aaPredicted RBP27.07■■□□□ 1.92
CSF3-209ENST00000583218 FBLN2P98095 1184 aa27.05■■□□□ 1.92
CSF3-209ENST00000583218 KIF21BO75037 1637 aa27.05■■□□□ 1.92
CSF3-209ENST00000583218 GRIN2AQ12879 1464 aa27.03■■□□□ 1.92
CSF3-209ENST00000583218 CHD1O14646 1710 aa26.97■■□□□ 1.91
CSF3-209ENST00000583218 GOLGA3Q08378 1498 aa26.96■■□□□ 1.91
CSF3-209ENST00000583218 NUP160Q12769 1436 aa26.89■■□□□ 1.89
CSF3-209ENST00000583218 EHMT2Q96KQ7 1210 aa26.86■■□□□ 1.89
CSF3-209ENST00000583218 CEP170Q5SW79 1584 aa26.84■■□□□ 1.89
CSF3-209ENST00000583218 UBTFP17480 764 aaKnown RBP26.82■■□□□ 1.88
CSF3-209ENST00000583218 OSCARQ8IYS5 282 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms