RNA–Protein interactions for RNA: ENST00000583206.1

TVP23C-209, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-209ENST00000583206 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
TVP23C-209ENST00000583206 ABCC9O60706 1549 aa22.43■■□□□ 1.18
TVP23C-209ENST00000583206 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
TVP23C-209ENST00000583206 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
TVP23C-209ENST00000583206 RB1CC1Q8TDY2 1594 aa21.09■□□□□ 0.97
TVP23C-209ENST00000583206 PABPN1Q86U42 306 aaKnown RBP eCLIP20.88■□□□□ 0.93
TVP23C-209ENST00000583206 NACADO15069 1562 aa20.87■□□□□ 0.93
TVP23C-209ENST00000583206 DCAF8L2P0C7V8 631 aa20.68■□□□□ 0.9
TVP23C-209ENST00000583206 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
TVP23C-209ENST00000583206 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
TVP23C-209ENST00000583206 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
TVP23C-209ENST00000583206 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
TVP23C-209ENST00000583206 CC2D2AQ9P2K1 1620 aa20.23■□□□□ 0.83
TVP23C-209ENST00000583206 SHROOM4Q9ULL8 1493 aa20.19■□□□□ 0.82
TVP23C-209ENST00000583206 DNAJC5Q9H3Z4 198 aa20.15■□□□□ 0.82
TVP23C-209ENST00000583206 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.8
TVP23C-209ENST00000583206 DCAF1Q9Y4B6 1507 aa20.03■□□□□ 0.8
TVP23C-209ENST00000583206 ZCCHC6Q5VYS8 1495 aaKnown RBP20.02■□□□□ 0.8
TVP23C-209ENST00000583206 SCRIBQ14160 1630 aa19.93■□□□□ 0.78
TVP23C-209ENST00000583206 CUX2O14529 1486 aa19.51■□□□□ 0.71
TVP23C-209ENST00000583206 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
TVP23C-209ENST00000583206 ERCC6Q03468 1493 aa19.33■□□□□ 0.68
TVP23C-209ENST00000583206 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
TVP23C-209ENST00000583206 NESP48681 1621 aa19.17■□□□□ 0.66
TVP23C-209ENST00000583206 HMGXB3Q12766 1538 aa19.08■□□□□ 0.64
TVP23C-209ENST00000583206 SMARCA2P51531 1590 aa19.04■□□□□ 0.64
TVP23C-209ENST00000583206 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
TVP23C-209ENST00000583206 SMARCA4P51532 1647 aa19■□□□□ 0.63
TVP23C-209ENST00000583206 TRIM41Q8WV44 630 aa18.97■□□□□ 0.63
TVP23C-209ENST00000583206 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
TVP23C-209ENST00000583206 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.61
TVP23C-209ENST00000583206 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
TVP23C-209ENST00000583206 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
TVP23C-209ENST00000583206 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.6
TVP23C-209ENST00000583206 KIF21AQ7Z4S6 1674 aa18.8■□□□□ 0.6
TVP23C-209ENST00000583206 CADPSQ9ULU8 1353 aa18.73■□□□□ 0.59
TVP23C-209ENST00000583206 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
TVP23C-209ENST00000583206 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
TVP23C-209ENST00000583206 WDR62O43379 1518 aa18.67■□□□□ 0.58
TVP23C-209ENST00000583206 OSCARQ8IYS5 282 aa18.6■□□□□ 0.57
TVP23C-209ENST00000583206 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
TVP23C-209ENST00000583206 FANCD2Q9BXW9 1451 aa18.47■□□□□ 0.55
TVP23C-209ENST00000583206 WIZO95785 1651 aa18.42■□□□□ 0.54
TVP23C-209ENST00000583206 CFTRP13569 1480 aa18.41■□□□□ 0.54
TVP23C-209ENST00000583206 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
TVP23C-209ENST00000583206 RIMBP3CA6NJZ7 1639 aa18.33■□□□□ 0.52
TVP23C-209ENST00000583206 RIMBP3BA6NNM3 1639 aa18.33■□□□□ 0.52
TVP23C-209ENST00000583206 RIMBP3Q9UFD9 1639 aa18.33■□□□□ 0.52
TVP23C-209ENST00000583206 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
TVP23C-209ENST00000583206 ZNF608Q9ULD9 1512 aaPredicted RBP18.24■□□□□ 0.51
TVP23C-209ENST00000583206 CYB5RLQ6IPT4 315 aa18.2■□□□□ 0.5
TVP23C-209ENST00000583206 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
TVP23C-209ENST00000583206 IFT140Q96RY7 1462 aa18.17■□□□□ 0.5
TVP23C-209ENST00000583206 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
TVP23C-209ENST00000583206 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
TVP23C-209ENST00000583206 TOPBP1Q92547 1522 aa18.08■□□□□ 0.48
TVP23C-209ENST00000583206 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
TVP23C-209ENST00000583206 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.48
TVP23C-209ENST00000583206 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.48
TVP23C-209ENST00000583206 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
TVP23C-209ENST00000583206 PRDM2Q13029 1718 aa18■□□□□ 0.47
TVP23C-209ENST00000583206 ABCC8Q09428 1581 aa17.97■□□□□ 0.47
TVP23C-209ENST00000583206 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
TVP23C-209ENST00000583206 CHD1O14646 1710 aa17.94■□□□□ 0.46
TVP23C-209ENST00000583206 FBLN2P98095 1184 aa17.93■□□□□ 0.46
TVP23C-209ENST00000583206 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
TVP23C-209ENST00000583206 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
TVP23C-209ENST00000583206 AEBP2Q6ZN18 517 aaPredicted RBP17.85■□□□□ 0.45
TVP23C-209ENST00000583206 RAD54L2Q9Y4B4 1467 aa17.83■□□□□ 0.45
TVP23C-209ENST00000583206 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
TVP23C-209ENST00000583206 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
TVP23C-209ENST00000583206 SOGA1O94964 1423 aa17.79■□□□□ 0.44
TVP23C-209ENST00000583206 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
TVP23C-209ENST00000583206 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
TVP23C-209ENST00000583206 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
TVP23C-209ENST00000583206 SYNJ1O43426 1573 aa17.68■□□□□ 0.42
TVP23C-209ENST00000583206 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
TVP23C-209ENST00000583206 WDR97A6NE52 1622 aa17.66■□□□□ 0.42
TVP23C-209ENST00000583206 SYNJ2O15056 1496 aa17.65■□□□□ 0.42
TVP23C-209ENST00000583206 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
TVP23C-209ENST00000583206 GAPVD1Q14C86 1478 aa17.65■□□□□ 0.42
TVP23C-209ENST00000583206 CUX1P39880 1505 aa17.61■□□□□ 0.41
TVP23C-209ENST00000583206 ERCC6L2Q5T890 1561 aa17.53■□□□□ 0.4
TVP23C-209ENST00000583206 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
TVP23C-209ENST00000583206 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
TVP23C-209ENST00000583206 NUP160Q12769 1436 aa17.44■□□□□ 0.38
TVP23C-209ENST00000583206 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
TVP23C-209ENST00000583206 GRIN2AQ12879 1464 aa17.43■□□□□ 0.38
TVP23C-209ENST00000583206 CEP170Q5SW79 1584 aa17.42■□□□□ 0.38
TVP23C-209ENST00000583206 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
TVP23C-209ENST00000583206 KIF13AQ9H1H9 1805 aa17.35■□□□□ 0.37
TVP23C-209ENST00000583206 KDM4FA0A1W2PPD8 638 aa17.32■□□□□ 0.36
TVP23C-209ENST00000583206 ADAMTS12P58397 1594 aa17.32■□□□□ 0.36
TVP23C-209ENST00000583206 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
TVP23C-209ENST00000583206 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
TVP23C-209ENST00000583206 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
TVP23C-209ENST00000583206 WRNQ14191 1432 aaPredicted RBP eCLIP17.28■□□□□ 0.36
TVP23C-209ENST00000583206 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
TVP23C-209ENST00000583206 ABCC10Q5T3U5 1492 aa17.27■□□□□ 0.36
TVP23C-209ENST00000583206 ILDR1Q86SU0 546 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms