RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, humanhuman

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-222ENST00000583085 NISCHQ9Y2I1 1504 aa26.2■■□□□ 1.78
STRADA-222ENST00000583085 CCDC180Q9P1Z9 1646 aa22.42■■□□□ 1.18
STRADA-222ENST00000583085 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
STRADA-222ENST00000583085 ZCCHC6Q5VYS8 1495 aaKnown RBP22.08■■□□□ 1.12
STRADA-222ENST00000583085 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
STRADA-222ENST00000583085 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
STRADA-222ENST00000583085 DCAF1Q9Y4B6 1507 aa21.43■■□□□ 1.02
STRADA-222ENST00000583085 ABCC9O60706 1549 aa21.2■□□□□ 0.98
STRADA-222ENST00000583085 SCRIBQ14160 1630 aa21.05■□□□□ 0.96
STRADA-222ENST00000583085 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
STRADA-222ENST00000583085 NACADO15069 1562 aa20.81■□□□□ 0.92
STRADA-222ENST00000583085 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
STRADA-222ENST00000583085 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
STRADA-222ENST00000583085 RB1CC1Q8TDY2 1594 aa20.58■□□□□ 0.88
STRADA-222ENST00000583085 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
STRADA-222ENST00000583085 MROH2BQ7Z745 1585 aa20.39■□□□□ 0.86
STRADA-222ENST00000583085 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
STRADA-222ENST00000583085 WIZO95785 1651 aa20.29■□□□□ 0.84
STRADA-222ENST00000583085 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
STRADA-222ENST00000583085 LOC105371045A0A1W2PR82 267 aa20.15■□□□□ 0.82
STRADA-222ENST00000583085 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
STRADA-222ENST00000583085 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.81
STRADA-222ENST00000583085 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
STRADA-222ENST00000583085 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
STRADA-222ENST00000583085 FAM9AQ8IZU1 332 aaPredicted RBP19.95■□□□□ 0.78
STRADA-222ENST00000583085 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.78
STRADA-222ENST00000583085 EHMT2Q96KQ7 1210 aa19.86■□□□□ 0.77
STRADA-222ENST00000583085 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
STRADA-222ENST00000583085 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
STRADA-222ENST00000583085 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
STRADA-222ENST00000583085 PCGF6Q9BYE7 350 aa19.72■□□□□ 0.75
STRADA-222ENST00000583085 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
STRADA-222ENST00000583085 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
STRADA-222ENST00000583085 ATAD2BQ9ULI0 1458 aa19.62■□□□□ 0.73
STRADA-222ENST00000583085 BAZ1BQ9UIG0 1483 aaKnown RBP19.55■□□□□ 0.72
STRADA-222ENST00000583085 SOGA1O94964 1423 aa19.43■□□□□ 0.7
STRADA-222ENST00000583085 RUSC2Q8N2Y8 1516 aa19.38■□□□□ 0.69
STRADA-222ENST00000583085 HRCP23327 699 aa19.37■□□□□ 0.69
STRADA-222ENST00000583085 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
STRADA-222ENST00000583085 TRIM26Q12899 539 aaPredicted RBP19.35■□□□□ 0.69
STRADA-222ENST00000583085 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
STRADA-222ENST00000583085 PPARGC1BQ86YN6 1023 aaKnown RBP19.32■□□□□ 0.68
STRADA-222ENST00000583085 NCAPD3P42695 1498 aa19.27■□□□□ 0.68
STRADA-222ENST00000583085 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
STRADA-222ENST00000583085 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
STRADA-222ENST00000583085 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
STRADA-222ENST00000583085 EEA1Q15075 1411 aa19.13■□□□□ 0.65
STRADA-222ENST00000583085 CEP162Q5TB80 1403 aa19.12■□□□□ 0.65
STRADA-222ENST00000583085 TTBK1Q5TCY1 1321 aaPredicted RBP19.1■□□□□ 0.65
STRADA-222ENST00000583085 TNIKQ9UKE5 1360 aa19.07■□□□□ 0.64
STRADA-222ENST00000583085 TOP2BQ02880 1626 aa19.07■□□□□ 0.64
STRADA-222ENST00000583085 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
STRADA-222ENST00000583085 GOLGA3Q08378 1498 aa19.04■□□□□ 0.64
STRADA-222ENST00000583085 CFTRP13569 1480 aa19.03■□□□□ 0.64
STRADA-222ENST00000583085 CUX1P39880 1505 aa19■□□□□ 0.63
STRADA-222ENST00000583085 BIVM-ERCC5R4GMW8 1640 aa19■□□□□ 0.63
STRADA-222ENST00000583085 RANGAP1P46060 587 aaPredicted RBP18.98■□□□□ 0.63
STRADA-222ENST00000583085 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
STRADA-222ENST00000583085 RAPGEF2Q9Y4G8 1499 aa18.96■□□□□ 0.63
STRADA-222ENST00000583085 KIF21BO75037 1637 aa18.95■□□□□ 0.62
STRADA-222ENST00000583085 CADPSQ9ULU8 1353 aa18.89■□□□□ 0.62
STRADA-222ENST00000583085 PRDM2Q13029 1718 aa18.87■□□□□ 0.61
STRADA-222ENST00000583085 CLIP1P30622 1438 aa18.84■□□□□ 0.61
STRADA-222ENST00000583085 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
STRADA-222ENST00000583085 NESP48681 1621 aa18.79■□□□□ 0.6
STRADA-222ENST00000583085 KIF27Q86VH2 1401 aa18.77■□□□□ 0.6
STRADA-222ENST00000583085 PRXQ9BXM0 1461 aa18.77■□□□□ 0.59
STRADA-222ENST00000583085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
STRADA-222ENST00000583085 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
STRADA-222ENST00000583085 FGD5Q6ZNL6 1462 aa18.72■□□□□ 0.59
STRADA-222ENST00000583085 CUX2O14529 1486 aa18.72■□□□□ 0.59
STRADA-222ENST00000583085 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
STRADA-222ENST00000583085 VPS8Q8N3P4 1428 aa18.69■□□□□ 0.58
STRADA-222ENST00000583085 ZEB1P37275 1124 aaPredicted RBP18.66■□□□□ 0.58
STRADA-222ENST00000583085 IGF1RP08069 1367 aa18.63■□□□□ 0.57
STRADA-222ENST00000583085 CCER1Q8TC90 406 aaPredicted RBP18.62■□□□□ 0.57
STRADA-222ENST00000583085 RAD54L2Q9Y4B4 1467 aa18.61■□□□□ 0.57
STRADA-222ENST00000583085 PELP1Q8IZL8 1130 aaKnown RBP18.61■□□□□ 0.57
STRADA-222ENST00000583085 ARAP1Q96P48 1450 aa18.6■□□□□ 0.57
STRADA-222ENST00000583085 APLP2Q06481 763 aa18.59■□□□□ 0.57
STRADA-222ENST00000583085 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
STRADA-222ENST00000583085 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
STRADA-222ENST00000583085 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
STRADA-222ENST00000583085 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
STRADA-222ENST00000583085 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
STRADA-222ENST00000583085 LAMC3Q9Y6N6 1575 aa18.51■□□□□ 0.55
STRADA-222ENST00000583085 ARHGAP35Q9NRY4 1499 aa18.5■□□□□ 0.55
STRADA-222ENST00000583085 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
STRADA-222ENST00000583085 KANK4Q5T7N3 995 aaPredicted RBP18.49■□□□□ 0.55
STRADA-222ENST00000583085 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
STRADA-222ENST00000583085 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
STRADA-222ENST00000583085 P3H3Q8IVL6 736 aa18.42■□□□□ 0.54
STRADA-222ENST00000583085 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
STRADA-222ENST00000583085 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
STRADA-222ENST00000583085 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
STRADA-222ENST00000583085 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
STRADA-222ENST00000583085 GAPVD1Q14C86 1478 aa18.28■□□□□ 0.52
STRADA-222ENST00000583085 CUL7Q14999 1698 aa18.27■□□□□ 0.52
STRADA-222ENST00000583085 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.52
STRADA-222ENST00000583085 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms