RNA–Protein interactions for RNA: ENST00000582967.1

RHBDL3-206, Transcript of rhomboid like 3, humanhuman

TSL 3

Gene RHBDL3, Length 1,246 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-206ENST00000582967 NISCHQ9Y2I1 1504 aa38.16■■■■□ 3.7
RHBDL3-206ENST00000582967 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3.01
RHBDL3-206ENST00000582967 ABCC9O60706 1549 aa32.99■■■□□ 2.87
RHBDL3-206ENST00000582967 DCAF8L2P0C7V8 631 aa31.9■■■□□ 2.7
RHBDL3-206ENST00000582967 NACADO15069 1562 aa31.83■■■□□ 2.69
RHBDL3-206ENST00000582967 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
RHBDL3-206ENST00000582967 ZCCHC6Q5VYS8 1495 aaKnown RBP31.79■■■□□ 2.68
RHBDL3-206ENST00000582967 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.67
RHBDL3-206ENST00000582967 DCAF1Q9Y4B6 1507 aa31.6■■■□□ 2.65
RHBDL3-206ENST00000582967 UNC13AQ9UPW8 1703 aa31■■■□□ 2.55
RHBDL3-206ENST00000582967 PABPN1Q86U42 306 aaKnown RBP eCLIP30.89■■■□□ 2.54
RHBDL3-206ENST00000582967 SCRIBQ14160 1630 aa30.85■■■□□ 2.53
RHBDL3-206ENST00000582967 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
RHBDL3-206ENST00000582967 DNAJC5BQ9UF47 199 aa30.6■■■□□ 2.49
RHBDL3-206ENST00000582967 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
RHBDL3-206ENST00000582967 EIF4G1Q04637 1599 aaKnown RBP29.99■■■□□ 2.39
RHBDL3-206ENST00000582967 CC2D2AQ9P2K1 1620 aa29.83■■■□□ 2.37
RHBDL3-206ENST00000582967 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
RHBDL3-206ENST00000582967 BAZ1AQ9NRL2 1556 aaPredicted RBP29.58■■■□□ 2.33
RHBDL3-206ENST00000582967 SMARCA4P51532 1647 aa29.55■■■□□ 2.32
RHBDL3-206ENST00000582967 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
RHBDL3-206ENST00000582967 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.29
RHBDL3-206ENST00000582967 NCAPD3P42695 1498 aa29.38■■■□□ 2.29
RHBDL3-206ENST00000582967 SMARCA2P51531 1590 aa29.38■■■□□ 2.29
RHBDL3-206ENST00000582967 PEG3Q9GZU2 1588 aa29.27■■■□□ 2.28
RHBDL3-206ENST00000582967 HMGXB3Q12766 1538 aa29.21■■■□□ 2.27
RHBDL3-206ENST00000582967 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
RHBDL3-206ENST00000582967 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
RHBDL3-206ENST00000582967 WIZO95785 1651 aa29.05■■■□□ 2.24
RHBDL3-206ENST00000582967 TOP2AP11388 1531 aaKnown RBP28.79■■■□□ 2.2
RHBDL3-206ENST00000582967 NESP48681 1621 aa28.57■■■□□ 2.16
RHBDL3-206ENST00000582967 LAMC3Q9Y6N6 1575 aa28.56■■■□□ 2.16
RHBDL3-206ENST00000582967 CADPSQ9ULU8 1353 aa28.55■■■□□ 2.16
RHBDL3-206ENST00000582967 SUPT5HO00267 1087 aaKnown RBP28.54■■■□□ 2.16
RHBDL3-206ENST00000582967 DNAJC5Q9H3Z4 198 aa28.53■■■□□ 2.16
RHBDL3-206ENST00000582967 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
RHBDL3-206ENST00000582967 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
RHBDL3-206ENST00000582967 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
RHBDL3-206ENST00000582967 CFTRP13569 1480 aa28.38■■■□□ 2.13
RHBDL3-206ENST00000582967 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
RHBDL3-206ENST00000582967 KIF21AQ7Z4S6 1674 aa28.19■■■□□ 2.1
RHBDL3-206ENST00000582967 CEP164Q9UPV0 1460 aa28.14■■■□□ 2.09
RHBDL3-206ENST00000582967 CUX2O14529 1486 aa28.12■■■□□ 2.09
RHBDL3-206ENST00000582967 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
RHBDL3-206ENST00000582967 THOC2Q8NI27 1593 aaKnown RBP28.07■■■□□ 2.08
RHBDL3-206ENST00000582967 MRC2Q9UBG0 1479 aa28.06■■■□□ 2.08
RHBDL3-206ENST00000582967 WDR62O43379 1518 aa27.94■■■□□ 2.06
RHBDL3-206ENST00000582967 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
RHBDL3-206ENST00000582967 ABCC8Q09428 1581 aa27.82■■■□□ 2.04
RHBDL3-206ENST00000582967 TOPBP1Q92547 1522 aa27.74■■■□□ 2.03
RHBDL3-206ENST00000582967 DNMBPQ6XZF7 1577 aa27.71■■■□□ 2.03
RHBDL3-206ENST00000582967 IFT140Q96RY7 1462 aa27.56■■■□□ 2
RHBDL3-206ENST00000582967 CUX1P39880 1505 aa27.56■■■□□ 2
RHBDL3-206ENST00000582967 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
RHBDL3-206ENST00000582967 WRNQ14191 1432 aaPredicted RBP eCLIP27.48■■□□□ 1.99
RHBDL3-206ENST00000582967 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
RHBDL3-206ENST00000582967 SOGA1O94964 1423 aa27.45■■□□□ 1.98
RHBDL3-206ENST00000582967 TARBP1Q13395 1621 aaKnown RBP27.39■■□□□ 1.98
RHBDL3-206ENST00000582967 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
RHBDL3-206ENST00000582967 ZNF608Q9ULD9 1512 aaPredicted RBP27.37■■□□□ 1.97
RHBDL3-206ENST00000582967 TOP2BQ02880 1626 aa27.37■■□□□ 1.97
RHBDL3-206ENST00000582967 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
RHBDL3-206ENST00000582967 SYNJ1O43426 1573 aa27.33■■□□□ 1.97
RHBDL3-206ENST00000582967 AQRO60306 1485 aaKnown RBP eCLIP27.27■■□□□ 1.96
RHBDL3-206ENST00000582967 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
RHBDL3-206ENST00000582967 EIF4G3O43432 1585 aaKnown RBP27.24■■□□□ 1.95
RHBDL3-206ENST00000582967 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
RHBDL3-206ENST00000582967 ABCA10Q8WWZ4 1543 aa27.22■■□□□ 1.95
RHBDL3-206ENST00000582967 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
RHBDL3-206ENST00000582967 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
RHBDL3-206ENST00000582967 OSCARQ8IYS5 282 aa27.05■■□□□ 1.92
RHBDL3-206ENST00000582967 ABCA5Q8WWZ7 1642 aa27.05■■□□□ 1.92
RHBDL3-206ENST00000582967 TRIM41Q8WV44 630 aa27.02■■□□□ 1.92
RHBDL3-206ENST00000582967 MAGI1Q96QZ7 1491 aaPredicted RBP27■■□□□ 1.91
RHBDL3-206ENST00000582967 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
RHBDL3-206ENST00000582967 FBLN2P98095 1184 aa26.97■■□□□ 1.91
RHBDL3-206ENST00000582967 PBRM1Q86U86 1689 aa26.96■■□□□ 1.91
RHBDL3-206ENST00000582967 CHMP7Q8WUX9 453 aaPredicted RBP26.94■■□□□ 1.9
RHBDL3-206ENST00000582967 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
RHBDL3-206ENST00000582967 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
RHBDL3-206ENST00000582967 SYNJ2O15056 1496 aa26.89■■□□□ 1.9
RHBDL3-206ENST00000582967 CHD1O14646 1710 aa26.86■■□□□ 1.89
RHBDL3-206ENST00000582967 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
RHBDL3-206ENST00000582967 IGF1RP08069 1367 aa26.8■■□□□ 1.88
RHBDL3-206ENST00000582967 ADAMTS12P58397 1594 aa26.78■■□□□ 1.88
RHBDL3-206ENST00000582967 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
RHBDL3-206ENST00000582967 GRIN2AQ12879 1464 aa26.72■■□□□ 1.87
RHBDL3-206ENST00000582967 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
RHBDL3-206ENST00000582967 CUL7Q14999 1698 aa26.65■■□□□ 1.86
RHBDL3-206ENST00000582967 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
RHBDL3-206ENST00000582967 NUP160Q12769 1436 aa26.61■■□□□ 1.85
RHBDL3-206ENST00000582967 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
RHBDL3-206ENST00000582967 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
RHBDL3-206ENST00000582967 EEA1Q15075 1411 aa26.52■■□□□ 1.84
RHBDL3-206ENST00000582967 ARHGEF11O15085 1522 aa26.5■■□□□ 1.83
RHBDL3-206ENST00000582967 RAPGEF2Q9Y4G8 1499 aa26.49■■□□□ 1.83
RHBDL3-206ENST00000582967 CSRNP3Q8WYN3 585 aa26.48■■□□□ 1.83
RHBDL3-206ENST00000582967 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
RHBDL3-206ENST00000582967 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
RHBDL3-206ENST00000582967 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms