RNA–Protein interactions for RNA: ENST00000582951.5

CUEDC1-211, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-211ENST00000582951 NISCHQ9Y2I1 1504 aa35.89■■■■□ 3.34
CUEDC1-211ENST00000582951 CCDC180Q9P1Z9 1646 aa31.47■■■□□ 2.63
CUEDC1-211ENST00000582951 ZCCHC6Q5VYS8 1495 aaKnown RBP30.17■■■□□ 2.42
CUEDC1-211ENST00000582951 DCAF1Q9Y4B6 1507 aa29.76■■■□□ 2.35
CUEDC1-211ENST00000582951 ABCC9O60706 1549 aa29.6■■■□□ 2.33
CUEDC1-211ENST00000582951 DCAF8L2P0C7V8 631 aa29.44■■■□□ 2.3
CUEDC1-211ENST00000582951 MYO15BQ96JP2 1530 aa29.44■■■□□ 2.3
CUEDC1-211ENST00000582951 NACADO15069 1562 aa29.25■■■□□ 2.27
CUEDC1-211ENST00000582951 SHROOM4Q9ULL8 1493 aa29.08■■■□□ 2.25
CUEDC1-211ENST00000582951 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.24
CUEDC1-211ENST00000582951 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
CUEDC1-211ENST00000582951 UNC13AQ9UPW8 1703 aa28.46■■■□□ 2.15
CUEDC1-211ENST00000582951 BICRAQ9NZM4 1560 aa28.09■■■□□ 2.09
CUEDC1-211ENST00000582951 SUPT5HO00267 1087 aaKnown RBP27.93■■■□□ 2.06
CUEDC1-211ENST00000582951 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
CUEDC1-211ENST00000582951 PABPN1Q86U42 306 aaKnown RBP eCLIP27.8■■■□□ 2.04
CUEDC1-211ENST00000582951 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
CUEDC1-211ENST00000582951 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.04
CUEDC1-211ENST00000582951 DNAJC5BQ9UF47 199 aa27.75■■■□□ 2.03
CUEDC1-211ENST00000582951 MROH2BQ7Z745 1585 aa27.69■■■□□ 2.02
CUEDC1-211ENST00000582951 SMARCA4P51532 1647 aa27.65■■■□□ 2.02
CUEDC1-211ENST00000582951 WIZO95785 1651 aa27.49■■□□□ 1.99
CUEDC1-211ENST00000582951 PEG3Q9GZU2 1588 aa27.34■■□□□ 1.97
CUEDC1-211ENST00000582951 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.95
CUEDC1-211ENST00000582951 EIF4G1Q04637 1599 aaKnown RBP27.25■■□□□ 1.95
CUEDC1-211ENST00000582951 SMARCA2P51531 1590 aa27.2■■□□□ 1.94
CUEDC1-211ENST00000582951 ATAD2BQ9ULI0 1458 aa27.14■■□□□ 1.94
CUEDC1-211ENST00000582951 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
CUEDC1-211ENST00000582951 HMGXB3Q12766 1538 aa26.97■■□□□ 1.91
CUEDC1-211ENST00000582951 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
CUEDC1-211ENST00000582951 CCDC88BA6NC98 1476 aa26.88■■□□□ 1.89
CUEDC1-211ENST00000582951 CC2D2AQ9P2K1 1620 aa26.86■■□□□ 1.89
CUEDC1-211ENST00000582951 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
CUEDC1-211ENST00000582951 PRDM2Q13029 1718 aa26.37■■□□□ 1.81
CUEDC1-211ENST00000582951 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
CUEDC1-211ENST00000582951 CFTRP13569 1480 aa26.31■■□□□ 1.8
CUEDC1-211ENST00000582951 ABCC8Q09428 1581 aa26.31■■□□□ 1.8
CUEDC1-211ENST00000582951 CADPSQ9ULU8 1353 aa26.2■■□□□ 1.78
CUEDC1-211ENST00000582951 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
CUEDC1-211ENST00000582951 SYNJ1O43426 1573 aa26.09■■□□□ 1.77
CUEDC1-211ENST00000582951 LAMC3Q9Y6N6 1575 aa26.09■■□□□ 1.77
CUEDC1-211ENST00000582951 DNAJC5Q9H3Z4 198 aa26.06■■□□□ 1.76
CUEDC1-211ENST00000582951 BIVM-ERCC5R4GMW8 1640 aa26.04■■□□□ 1.76
CUEDC1-211ENST00000582951 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
CUEDC1-211ENST00000582951 NESP48681 1621 aa25.96■■□□□ 1.75
CUEDC1-211ENST00000582951 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
CUEDC1-211ENST00000582951 CUX1P39880 1505 aa25.92■■□□□ 1.74
CUEDC1-211ENST00000582951 EEA1Q15075 1411 aa25.83■■□□□ 1.73
CUEDC1-211ENST00000582951 PDS5BQ9NTI5 1447 aa25.82■■□□□ 1.72
CUEDC1-211ENST00000582951 CEP164Q9UPV0 1460 aa25.81■■□□□ 1.72
CUEDC1-211ENST00000582951 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
CUEDC1-211ENST00000582951 FAM9AQ8IZU1 332 aaPredicted RBP25.77■■□□□ 1.72
CUEDC1-211ENST00000582951 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
CUEDC1-211ENST00000582951 SOGA1O94964 1423 aa25.75■■□□□ 1.71
CUEDC1-211ENST00000582951 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
CUEDC1-211ENST00000582951 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
CUEDC1-211ENST00000582951 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
CUEDC1-211ENST00000582951 LOC105371045A0A1W2PR82 267 aa25.64■■□□□ 1.7
CUEDC1-211ENST00000582951 URB2Q14146 1524 aaKnown RBP25.62■■□□□ 1.69
CUEDC1-211ENST00000582951 CSRNP3Q8WYN3 585 aa25.56■■□□□ 1.68
CUEDC1-211ENST00000582951 KIF21BO75037 1637 aa25.53■■□□□ 1.68
CUEDC1-211ENST00000582951 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
CUEDC1-211ENST00000582951 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
CUEDC1-211ENST00000582951 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
CUEDC1-211ENST00000582951 WDR97A6NE52 1622 aa25.45■■□□□ 1.67
CUEDC1-211ENST00000582951 CUX2O14529 1486 aa25.45■■□□□ 1.66
CUEDC1-211ENST00000582951 GOLGA3Q08378 1498 aa25.45■■□□□ 1.66
CUEDC1-211ENST00000582951 ABCA10Q8WWZ4 1543 aa25.44■■□□□ 1.66
CUEDC1-211ENST00000582951 ERCC6Q03468 1493 aa25.42■■□□□ 1.66
CUEDC1-211ENST00000582951 WDR62O43379 1518 aa25.42■■□□□ 1.66
CUEDC1-211ENST00000582951 RAD54L2Q9Y4B4 1467 aa25.39■■□□□ 1.65
CUEDC1-211ENST00000582951 THOC2Q8NI27 1593 aaKnown RBP25.37■■□□□ 1.65
CUEDC1-211ENST00000582951 ERICH3Q5RHP9 1530 aa25.36■■□□□ 1.65
CUEDC1-211ENST00000582951 EHMT2Q96KQ7 1210 aa25.34■■□□□ 1.65
CUEDC1-211ENST00000582951 PRXQ9BXM0 1461 aa25.33■■□□□ 1.65
CUEDC1-211ENST00000582951 TARBP1Q13395 1621 aaKnown RBP25.32■■□□□ 1.64
CUEDC1-211ENST00000582951 TNIKQ9UKE5 1360 aa25.31■■□□□ 1.64
CUEDC1-211ENST00000582951 ABCA5Q8WWZ7 1642 aa25.29■■□□□ 1.64
CUEDC1-211ENST00000582951 RAPGEF2Q9Y4G8 1499 aa25.27■■□□□ 1.64
CUEDC1-211ENST00000582951 CUL7Q14999 1698 aa25.23■■□□□ 1.63
CUEDC1-211ENST00000582951 IGF1RP08069 1367 aa25.22■■□□□ 1.63
CUEDC1-211ENST00000582951 UBTFP17480 764 aaKnown RBP25.2■■□□□ 1.62
CUEDC1-211ENST00000582951 IFT140Q96RY7 1462 aa25.2■■□□□ 1.62
CUEDC1-211ENST00000582951 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
CUEDC1-211ENST00000582951 GAPVD1Q14C86 1478 aa25.16■■□□□ 1.62
CUEDC1-211ENST00000582951 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
CUEDC1-211ENST00000582951 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
CUEDC1-211ENST00000582951 TDRD9Q8NDG6 1382 aaKnown RBP25.11■■□□□ 1.61
CUEDC1-211ENST00000582951 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
CUEDC1-211ENST00000582951 CLIP1P30622 1438 aa24.99■■□□□ 1.59
CUEDC1-211ENST00000582951 GRIN2BQ13224 1484 aa24.99■■□□□ 1.59
CUEDC1-211ENST00000582951 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
CUEDC1-211ENST00000582951 AQRO60306 1485 aaKnown RBP eCLIP24.97■■□□□ 1.59
CUEDC1-211ENST00000582951 ADAMTS12P58397 1594 aa24.97■■□□□ 1.59
CUEDC1-211ENST00000582951 CTTNBP2Q8WZ74 1663 aa24.95■■□□□ 1.58
CUEDC1-211ENST00000582951 FHAD1B1AJZ9 1412 aa24.9■■□□□ 1.58
CUEDC1-211ENST00000582951 SNAPC4Q5SXM2 1469 aa24.82■■□□□ 1.56
CUEDC1-211ENST00000582951 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
CUEDC1-211ENST00000582951 VPS8Q8N3P4 1428 aa24.79■■□□□ 1.56
CUEDC1-211ENST00000582951 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms