RNA–Protein interactions for RNA: ENST00000582754.5

KRT23-207, Transcript of keratin 23, humanhuman

TSL 1 (best)

Gene KRT23, Length 1,567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT23-207ENST00000582754 NISCHQ9Y2I1 1504 aa37.53■■■■□ 3.6
KRT23-207ENST00000582754 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
KRT23-207ENST00000582754 ABCC9O60706 1549 aa31.99■■■□□ 2.71
KRT23-207ENST00000582754 ZCCHC6Q5VYS8 1495 aaKnown RBP31.36■■■□□ 2.61
KRT23-207ENST00000582754 DCAF8L2P0C7V8 631 aa31.21■■■□□ 2.59
KRT23-207ENST00000582754 DCAF1Q9Y4B6 1507 aa31.05■■■□□ 2.56
KRT23-207ENST00000582754 NACADO15069 1562 aa31.03■■■□□ 2.56
KRT23-207ENST00000582754 MYO15BQ96JP2 1530 aa31■■■□□ 2.55
KRT23-207ENST00000582754 RB1CC1Q8TDY2 1594 aa30.94■■■□□ 2.54
KRT23-207ENST00000582754 SCRIBQ14160 1630 aa30.29■■■□□ 2.44
KRT23-207ENST00000582754 UNC13AQ9UPW8 1703 aa30.24■■■□□ 2.43
KRT23-207ENST00000582754 BICRAQ9NZM4 1560 aa30.01■■■□□ 2.4
KRT23-207ENST00000582754 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
KRT23-207ENST00000582754 SHROOM4Q9ULL8 1493 aa29.98■■■□□ 2.39
KRT23-207ENST00000582754 CECR2Q9BXF3 1484 aa29.21■■■□□ 2.27
KRT23-207ENST00000582754 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
KRT23-207ENST00000582754 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
KRT23-207ENST00000582754 SMARCA4P51532 1647 aa29.01■■■□□ 2.23
KRT23-207ENST00000582754 MROH2BQ7Z745 1585 aa28.95■■■□□ 2.22
KRT23-207ENST00000582754 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
KRT23-207ENST00000582754 CC2D2AQ9P2K1 1620 aa28.93■■■□□ 2.22
KRT23-207ENST00000582754 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
KRT23-207ENST00000582754 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
KRT23-207ENST00000582754 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
KRT23-207ENST00000582754 PEG3Q9GZU2 1588 aa28.7■■■□□ 2.19
KRT23-207ENST00000582754 NCAPD3P42695 1498 aa28.65■■■□□ 2.18
KRT23-207ENST00000582754 WIZO95785 1651 aa28.65■■■□□ 2.18
KRT23-207ENST00000582754 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
KRT23-207ENST00000582754 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
KRT23-207ENST00000582754 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
KRT23-207ENST00000582754 TOP2AP11388 1531 aaKnown RBP28.37■■■□□ 2.13
KRT23-207ENST00000582754 CCDC88BA6NC98 1476 aa28.05■■■□□ 2.08
KRT23-207ENST00000582754 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
KRT23-207ENST00000582754 NESP48681 1621 aa27.83■■■□□ 2.05
KRT23-207ENST00000582754 LAMC3Q9Y6N6 1575 aa27.79■■■□□ 2.04
KRT23-207ENST00000582754 CFTRP13569 1480 aa27.78■■■□□ 2.04
KRT23-207ENST00000582754 PDS5BQ9NTI5 1447 aa27.6■■■□□ 2.01
KRT23-207ENST00000582754 PRDM2Q13029 1718 aa27.55■■■□□ 2
KRT23-207ENST00000582754 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
KRT23-207ENST00000582754 ERCC6Q03468 1493 aa27.51■■■□□ 2
KRT23-207ENST00000582754 KIF21AQ7Z4S6 1674 aa27.48■■□□□ 1.99
KRT23-207ENST00000582754 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
KRT23-207ENST00000582754 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
KRT23-207ENST00000582754 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
KRT23-207ENST00000582754 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.95
KRT23-207ENST00000582754 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
KRT23-207ENST00000582754 WDR62O43379 1518 aa27.18■■□□□ 1.94
KRT23-207ENST00000582754 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
KRT23-207ENST00000582754 TOPBP1Q92547 1522 aa27.14■■□□□ 1.94
KRT23-207ENST00000582754 DNMBPQ6XZF7 1577 aa27.14■■□□□ 1.93
KRT23-207ENST00000582754 WRNQ14191 1432 aaPredicted RBP eCLIP27.13■■□□□ 1.93
KRT23-207ENST00000582754 CUX1P39880 1505 aa27.12■■□□□ 1.93
KRT23-207ENST00000582754 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
KRT23-207ENST00000582754 CUX2O14529 1486 aa27.02■■□□□ 1.92
KRT23-207ENST00000582754 TOP2BQ02880 1626 aa27■■□□□ 1.91
KRT23-207ENST00000582754 BIVM-ERCC5R4GMW8 1640 aa26.99■■□□□ 1.91
KRT23-207ENST00000582754 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
KRT23-207ENST00000582754 POLA1P09884 1462 aaPredicted RBP26.94■■□□□ 1.9
KRT23-207ENST00000582754 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
KRT23-207ENST00000582754 SOGA1O94964 1423 aa26.85■■□□□ 1.89
KRT23-207ENST00000582754 IFT140Q96RY7 1462 aa26.84■■□□□ 1.89
KRT23-207ENST00000582754 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
KRT23-207ENST00000582754 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
KRT23-207ENST00000582754 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
KRT23-207ENST00000582754 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
KRT23-207ENST00000582754 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
KRT23-207ENST00000582754 TDRD9Q8NDG6 1382 aaKnown RBP26.66■■□□□ 1.86
KRT23-207ENST00000582754 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.85
KRT23-207ENST00000582754 EIF4G3O43432 1585 aaKnown RBP26.59■■□□□ 1.85
KRT23-207ENST00000582754 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
KRT23-207ENST00000582754 GAPVD1Q14C86 1478 aa26.54■■□□□ 1.84
KRT23-207ENST00000582754 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
KRT23-207ENST00000582754 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
KRT23-207ENST00000582754 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
KRT23-207ENST00000582754 PBRM1Q86U86 1689 aa26.42■■□□□ 1.82
KRT23-207ENST00000582754 EEA1Q15075 1411 aa26.39■■□□□ 1.81
KRT23-207ENST00000582754 ERICH3Q5RHP9 1530 aa26.38■■□□□ 1.81
KRT23-207ENST00000582754 IGF1RP08069 1367 aa26.37■■□□□ 1.81
KRT23-207ENST00000582754 SNAPC4Q5SXM2 1469 aa26.37■■□□□ 1.81
KRT23-207ENST00000582754 FAM9AQ8IZU1 332 aaPredicted RBP26.35■■□□□ 1.81
KRT23-207ENST00000582754 MAGI1Q96QZ7 1491 aaPredicted RBP26.33■■□□□ 1.81
KRT23-207ENST00000582754 LOC105371045A0A1W2PR82 267 aa26.29■■□□□ 1.8
KRT23-207ENST00000582754 CSRNP3Q8WYN3 585 aa26.26■■□□□ 1.79
KRT23-207ENST00000582754 ADAMTS12P58397 1594 aa26.26■■□□□ 1.79
KRT23-207ENST00000582754 FHAD1B1AJZ9 1412 aa26.25■■□□□ 1.79
KRT23-207ENST00000582754 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
KRT23-207ENST00000582754 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
KRT23-207ENST00000582754 CUL7Q14999 1698 aa26.23■■□□□ 1.79
KRT23-207ENST00000582754 FBLN2P98095 1184 aa26.2■■□□□ 1.79
KRT23-207ENST00000582754 CHMP7Q8WUX9 453 aaPredicted RBP26.2■■□□□ 1.79
KRT23-207ENST00000582754 CHD1O14646 1710 aa26.15■■□□□ 1.78
KRT23-207ENST00000582754 PRXQ9BXM0 1461 aa26.14■■□□□ 1.78
KRT23-207ENST00000582754 GRIN2AQ12879 1464 aa26.13■■□□□ 1.77
KRT23-207ENST00000582754 RAPGEF2Q9Y4G8 1499 aa26.11■■□□□ 1.77
KRT23-207ENST00000582754 OSCARQ8IYS5 282 aa26.03■■□□□ 1.76
KRT23-207ENST00000582754 KIF21BO75037 1637 aa26.02■■□□□ 1.76
KRT23-207ENST00000582754 NUP160Q12769 1436 aa26■■□□□ 1.75
KRT23-207ENST00000582754 CEP170Q5SW79 1584 aa25.97■■□□□ 1.75
KRT23-207ENST00000582754 GOLGA3Q08378 1498 aa25.97■■□□□ 1.75
KRT23-207ENST00000582754 EHMT2Q96KQ7 1210 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms