RNA–Protein interactions for RNA: ENST00000582734.1

C19orf47-207, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 2

Gene C19orf47, Length 1,977 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-207ENST00000582734 NISCHQ9Y2I1 1504 aa36.13■■■■□ 3.37
C19orf47-207ENST00000582734 CCDC180Q9P1Z9 1646 aa31.27■■■□□ 2.6
C19orf47-207ENST00000582734 ZCCHC6Q5VYS8 1495 aaKnown RBP30.41■■■□□ 2.46
C19orf47-207ENST00000582734 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
C19orf47-207ENST00000582734 SHROOM4Q9ULL8 1493 aa29.84■■■□□ 2.37
C19orf47-207ENST00000582734 DCAF1Q9Y4B6 1507 aa29.82■■■□□ 2.36
C19orf47-207ENST00000582734 ABCC9O60706 1549 aa29.36■■■□□ 2.29
C19orf47-207ENST00000582734 MYO15BQ96JP2 1530 aa29.32■■■□□ 2.28
C19orf47-207ENST00000582734 NACADO15069 1562 aa29.06■■■□□ 2.24
C19orf47-207ENST00000582734 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
C19orf47-207ENST00000582734 SCRIBQ14160 1630 aa28.9■■■□□ 2.22
C19orf47-207ENST00000582734 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
C19orf47-207ENST00000582734 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
C19orf47-207ENST00000582734 RSF1Q96T23 1441 aaPredicted RBP28.2■■■□□ 2.1
C19orf47-207ENST00000582734 UNC13AQ9UPW8 1703 aa28.19■■■□□ 2.1
C19orf47-207ENST00000582734 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
C19orf47-207ENST00000582734 MROH2BQ7Z745 1585 aa27.96■■■□□ 2.07
C19orf47-207ENST00000582734 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
C19orf47-207ENST00000582734 BAZ1AQ9NRL2 1556 aaPredicted RBP27.85■■■□□ 2.05
C19orf47-207ENST00000582734 PABPN1Q86U42 306 aaKnown RBP eCLIP27.8■■■□□ 2.04
C19orf47-207ENST00000582734 WIZO95785 1651 aa27.75■■■□□ 2.03
C19orf47-207ENST00000582734 SMARCA4P51532 1647 aa27.69■■■□□ 2.02
C19orf47-207ENST00000582734 HRCP23327 699 aa27.57■■■□□ 2
C19orf47-207ENST00000582734 TOP2AP11388 1531 aaKnown RBP27.43■■□□□ 1.98
C19orf47-207ENST00000582734 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
C19orf47-207ENST00000582734 LOC105371045A0A1W2PR82 267 aa27.39■■□□□ 1.98
C19orf47-207ENST00000582734 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
C19orf47-207ENST00000582734 SMARCA2P51531 1590 aa27.2■■□□□ 1.95
C19orf47-207ENST00000582734 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.94
C19orf47-207ENST00000582734 ATAD2BQ9ULI0 1458 aa27.16■■□□□ 1.94
C19orf47-207ENST00000582734 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
C19orf47-207ENST00000582734 EIF4G1Q04637 1599 aaKnown RBP27.11■■□□□ 1.93
C19orf47-207ENST00000582734 TRIM26Q12899 539 aaPredicted RBP27.03■■□□□ 1.92
C19orf47-207ENST00000582734 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
C19orf47-207ENST00000582734 NCAPD3P42695 1498 aa26.85■■□□□ 1.89
C19orf47-207ENST00000582734 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
C19orf47-207ENST00000582734 PPARGC1BQ86YN6 1023 aaKnown RBP26.8■■□□□ 1.88
C19orf47-207ENST00000582734 FAM9AQ8IZU1 332 aaPredicted RBP26.79■■□□□ 1.88
C19orf47-207ENST00000582734 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
C19orf47-207ENST00000582734 ZEB1P37275 1124 aaPredicted RBP26.55■■□□□ 1.84
C19orf47-207ENST00000582734 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
C19orf47-207ENST00000582734 WRNQ14191 1432 aaPredicted RBP eCLIP26.52■■□□□ 1.84
C19orf47-207ENST00000582734 EHMT2Q96KQ7 1210 aa26.46■■□□□ 1.83
C19orf47-207ENST00000582734 SYNJ1O43426 1573 aa26.4■■□□□ 1.82
C19orf47-207ENST00000582734 CFTRP13569 1480 aa26.37■■□□□ 1.81
C19orf47-207ENST00000582734 SOGA1O94964 1423 aa26.35■■□□□ 1.81
C19orf47-207ENST00000582734 EEA1Q15075 1411 aa26.29■■□□□ 1.8
C19orf47-207ENST00000582734 TOP2BQ02880 1626 aa26.24■■□□□ 1.79
C19orf47-207ENST00000582734 RUSC2Q8N2Y8 1516 aa26.24■■□□□ 1.79
C19orf47-207ENST00000582734 CADPSQ9ULU8 1353 aa26.21■■□□□ 1.79
C19orf47-207ENST00000582734 PRDM2Q13029 1718 aa26.2■■□□□ 1.78
C19orf47-207ENST00000582734 BIVM-ERCC5R4GMW8 1640 aa26.19■■□□□ 1.78
C19orf47-207ENST00000582734 CSRNP3Q8WYN3 585 aa26.18■■□□□ 1.78
C19orf47-207ENST00000582734 CUX1P39880 1505 aa26.11■■□□□ 1.77
C19orf47-207ENST00000582734 TNIKQ9UKE5 1360 aa26.1■■□□□ 1.77
C19orf47-207ENST00000582734 CEP162Q5TB80 1403 aa26.1■■□□□ 1.77
C19orf47-207ENST00000582734 GOLGA3Q08378 1498 aa25.98■■□□□ 1.75
C19orf47-207ENST00000582734 KIF21BO75037 1637 aa25.94■■□□□ 1.74
C19orf47-207ENST00000582734 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
C19orf47-207ENST00000582734 FANCD2Q9BXW9 1451 aa25.93■■□□□ 1.74
C19orf47-207ENST00000582734 UBTFP17480 764 aaKnown RBP25.91■■□□□ 1.74
C19orf47-207ENST00000582734 NESP48681 1621 aa25.9■■□□□ 1.74
C19orf47-207ENST00000582734 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
C19orf47-207ENST00000582734 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
C19orf47-207ENST00000582734 CCER1Q8TC90 406 aaPredicted RBP25.82■■□□□ 1.72
C19orf47-207ENST00000582734 KIF27Q86VH2 1401 aa25.81■■□□□ 1.72
C19orf47-207ENST00000582734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.8■■□□□ 1.72
C19orf47-207ENST00000582734 RAPGEF2Q9Y4G8 1499 aa25.78■■□□□ 1.72
C19orf47-207ENST00000582734 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.72
C19orf47-207ENST00000582734 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
C19orf47-207ENST00000582734 PRXQ9BXM0 1461 aa25.73■■□□□ 1.71
C19orf47-207ENST00000582734 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.7
C19orf47-207ENST00000582734 CUX2O14529 1486 aa25.68■■□□□ 1.7
C19orf47-207ENST00000582734 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
C19orf47-207ENST00000582734 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
C19orf47-207ENST00000582734 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
C19orf47-207ENST00000582734 CLIP1P30622 1438 aa25.61■■□□□ 1.69
C19orf47-207ENST00000582734 POLA1P09884 1462 aaPredicted RBP25.59■■□□□ 1.69
C19orf47-207ENST00000582734 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
C19orf47-207ENST00000582734 IGF1RP08069 1367 aa25.57■■□□□ 1.68
C19orf47-207ENST00000582734 VPS8Q8N3P4 1428 aa25.55■■□□□ 1.68
C19orf47-207ENST00000582734 KIF21AQ7Z4S6 1674 aa25.54■■□□□ 1.68
C19orf47-207ENST00000582734 RAD54L2Q9Y4B4 1467 aa25.54■■□□□ 1.68
C19orf47-207ENST00000582734 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
C19orf47-207ENST00000582734 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
C19orf47-207ENST00000582734 RANGAP1P46060 587 aaPredicted RBP25.43■■□□□ 1.66
C19orf47-207ENST00000582734 WDR97A6NE52 1622 aa25.39■■□□□ 1.65
C19orf47-207ENST00000582734 APLP2Q06481 763 aa25.33■■□□□ 1.65
C19orf47-207ENST00000582734 DIEXFQ68CQ4 756 aaKnown RBP25.33■■□□□ 1.64
C19orf47-207ENST00000582734 SCAF1Q9H7N4 1312 aaKnown RBP25.32■■□□□ 1.64
C19orf47-207ENST00000582734 MRC2Q9UBG0 1479 aa25.32■■□□□ 1.64
C19orf47-207ENST00000582734 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
C19orf47-207ENST00000582734 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
C19orf47-207ENST00000582734 CUL7Q14999 1698 aa25.28■■□□□ 1.64
C19orf47-207ENST00000582734 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
C19orf47-207ENST00000582734 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
C19orf47-207ENST00000582734 GAPVD1Q14C86 1478 aa25.23■■□□□ 1.63
C19orf47-207ENST00000582734 HNRNPUL2Q1KMD3 747 aaKnown RBP25.23■■□□□ 1.63
C19orf47-207ENST00000582734 ARHGAP35Q9NRY4 1499 aa25.22■■□□□ 1.63
C19orf47-207ENST00000582734 ZNF316A6NFI3 1004 aaPredicted RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms