RNA–Protein interactions for RNA: ENST00000581949.1

TMEM220-206, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM220, Length 376 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-206ENST00000581949 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
TMEM220-206ENST00000581949 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
TMEM220-206ENST00000581949 ABCC9O60706 1549 aa21.9■■□□□ 1.1
TMEM220-206ENST00000581949 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
TMEM220-206ENST00000581949 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
TMEM220-206ENST00000581949 NACADO15069 1562 aa21.15■□□□□ 0.98
TMEM220-206ENST00000581949 RB1CC1Q8TDY2 1594 aa21.15■□□□□ 0.98
TMEM220-206ENST00000581949 ZCCHC6Q5VYS8 1495 aaKnown RBP21.15■□□□□ 0.98
TMEM220-206ENST00000581949 MYO15BQ96JP2 1530 aa21.02■□□□□ 0.96
TMEM220-206ENST00000581949 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
TMEM220-206ENST00000581949 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
TMEM220-206ENST00000581949 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
TMEM220-206ENST00000581949 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
TMEM220-206ENST00000581949 BICRAQ9NZM4 1560 aa20.39■□□□□ 0.85
TMEM220-206ENST00000581949 SHROOM4Q9ULL8 1493 aa20.26■□□□□ 0.83
TMEM220-206ENST00000581949 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
TMEM220-206ENST00000581949 DNAJC5BQ9UF47 199 aa19.9■□□□□ 0.78
TMEM220-206ENST00000581949 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
TMEM220-206ENST00000581949 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
TMEM220-206ENST00000581949 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
TMEM220-206ENST00000581949 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
TMEM220-206ENST00000581949 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
TMEM220-206ENST00000581949 MROH2BQ7Z745 1585 aa19.56■□□□□ 0.72
TMEM220-206ENST00000581949 SMARCA2P51531 1590 aa19.55■□□□□ 0.72
TMEM220-206ENST00000581949 ATAD2BQ9ULI0 1458 aa19.53■□□□□ 0.72
TMEM220-206ENST00000581949 NCAPD3P42695 1498 aa19.49■□□□□ 0.71
TMEM220-206ENST00000581949 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
TMEM220-206ENST00000581949 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
TMEM220-206ENST00000581949 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
TMEM220-206ENST00000581949 HMGXB3Q12766 1538 aa19.4■□□□□ 0.7
TMEM220-206ENST00000581949 WIZO95785 1651 aa19.38■□□□□ 0.69
TMEM220-206ENST00000581949 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
TMEM220-206ENST00000581949 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
TMEM220-206ENST00000581949 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
TMEM220-206ENST00000581949 CCDC88BA6NC98 1476 aa18.97■□□□□ 0.63
TMEM220-206ENST00000581949 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
TMEM220-206ENST00000581949 NESP48681 1621 aa18.96■□□□□ 0.63
TMEM220-206ENST00000581949 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
TMEM220-206ENST00000581949 PDS5BQ9NTI5 1447 aa18.9■□□□□ 0.62
TMEM220-206ENST00000581949 CFTRP13569 1480 aa18.85■□□□□ 0.61
TMEM220-206ENST00000581949 FANCD2Q9BXW9 1451 aa18.75■□□□□ 0.59
TMEM220-206ENST00000581949 KIF21AQ7Z4S6 1674 aa18.75■□□□□ 0.59
TMEM220-206ENST00000581949 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
TMEM220-206ENST00000581949 CEP164Q9UPV0 1460 aa18.72■□□□□ 0.59
TMEM220-206ENST00000581949 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.57
TMEM220-206ENST00000581949 CUX2O14529 1486 aa18.6■□□□□ 0.57
TMEM220-206ENST00000581949 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
TMEM220-206ENST00000581949 ABCC8Q09428 1581 aa18.53■□□□□ 0.56
TMEM220-206ENST00000581949 WDR62O43379 1518 aa18.53■□□□□ 0.56
TMEM220-206ENST00000581949 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
TMEM220-206ENST00000581949 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
TMEM220-206ENST00000581949 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
TMEM220-206ENST00000581949 WRNQ14191 1432 aaPredicted RBP eCLIP18.35■□□□□ 0.53
TMEM220-206ENST00000581949 CUX1P39880 1505 aa18.34■□□□□ 0.53
TMEM220-206ENST00000581949 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
TMEM220-206ENST00000581949 SOGA1O94964 1423 aa18.3■□□□□ 0.52
TMEM220-206ENST00000581949 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
TMEM220-206ENST00000581949 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
TMEM220-206ENST00000581949 TOP2BQ02880 1626 aa18.25■□□□□ 0.51
TMEM220-206ENST00000581949 BIVM-ERCC5R4GMW8 1640 aa18.23■□□□□ 0.51
TMEM220-206ENST00000581949 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
TMEM220-206ENST00000581949 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
TMEM220-206ENST00000581949 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
TMEM220-206ENST00000581949 TARBP1Q13395 1621 aaKnown RBP18.19■□□□□ 0.5
TMEM220-206ENST00000581949 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
TMEM220-206ENST00000581949 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
TMEM220-206ENST00000581949 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
TMEM220-206ENST00000581949 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMEM220-206ENST00000581949 ABCA10Q8WWZ4 1543 aa18.11■□□□□ 0.49
TMEM220-206ENST00000581949 WDR97A6NE52 1622 aa18.1■□□□□ 0.49
TMEM220-206ENST00000581949 EIF4G3O43432 1585 aaKnown RBP18.1■□□□□ 0.49
TMEM220-206ENST00000581949 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
TMEM220-206ENST00000581949 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
TMEM220-206ENST00000581949 FBLN2P98095 1184 aa18.03■□□□□ 0.48
TMEM220-206ENST00000581949 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
TMEM220-206ENST00000581949 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
TMEM220-206ENST00000581949 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
TMEM220-206ENST00000581949 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
TMEM220-206ENST00000581949 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
TMEM220-206ENST00000581949 SNAPC4Q5SXM2 1469 aa17.96■□□□□ 0.47
TMEM220-206ENST00000581949 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
TMEM220-206ENST00000581949 ERICH3Q5RHP9 1530 aa17.91■□□□□ 0.46
TMEM220-206ENST00000581949 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
TMEM220-206ENST00000581949 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
TMEM220-206ENST00000581949 CHD1O14646 1710 aa17.87■□□□□ 0.45
TMEM220-206ENST00000581949 DNAJC5Q9H3Z4 198 aa17.87■□□□□ 0.45
TMEM220-206ENST00000581949 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
TMEM220-206ENST00000581949 IGF1RP08069 1367 aa17.85■□□□□ 0.45
TMEM220-206ENST00000581949 ADAMTS12P58397 1594 aa17.81■□□□□ 0.44
TMEM220-206ENST00000581949 CARMIL1Q5VZK9 1371 aa17.79■□□□□ 0.44
TMEM220-206ENST00000581949 RUSC2Q8N2Y8 1516 aa17.79■□□□□ 0.44
TMEM220-206ENST00000581949 CUL7Q14999 1698 aa17.79■□□□□ 0.44
TMEM220-206ENST00000581949 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
TMEM220-206ENST00000581949 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.44
TMEM220-206ENST00000581949 EEA1Q15075 1411 aa17.76■□□□□ 0.43
TMEM220-206ENST00000581949 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
TMEM220-206ENST00000581949 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
TMEM220-206ENST00000581949 NUP160Q12769 1436 aa17.66■□□□□ 0.42
TMEM220-206ENST00000581949 CEP170Q5SW79 1584 aa17.64■□□□□ 0.41
TMEM220-206ENST00000581949 CLASP1Q7Z460 1538 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms