RNA–Protein interactions for RNA: ENST00000581741.1

RPL17-213, Transcript of ribosomal protein L17, humanhuman

TSL 2

Gene RPL17, Length 596 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-213ENST00000581741 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
RPL17-213ENST00000581741 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
RPL17-213ENST00000581741 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
RPL17-213ENST00000581741 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
RPL17-213ENST00000581741 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
RPL17-213ENST00000581741 ABCC9O60706 1549 aa17.47■□□□□ 0.39
RPL17-213ENST00000581741 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
RPL17-213ENST00000581741 FOXD1Q16676 465 aa16.91■□□□□ 0.3
RPL17-213ENST00000581741 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
RPL17-213ENST00000581741 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
RPL17-213ENST00000581741 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
RPL17-213ENST00000581741 NACADO15069 1562 aa16.47■□□□□ 0.23
RPL17-213ENST00000581741 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
RPL17-213ENST00000581741 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
RPL17-213ENST00000581741 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
RPL17-213ENST00000581741 MYO15BQ96JP2 1530 aa16.15■□□□□ 0.18
RPL17-213ENST00000581741 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.16
RPL17-213ENST00000581741 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
RPL17-213ENST00000581741 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
RPL17-213ENST00000581741 DCAF1Q9Y4B6 1507 aa15.95■□□□□ 0.14
RPL17-213ENST00000581741 ADRA2BP18089 450 aa15.93■□□□□ 0.14
RPL17-213ENST00000581741 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
RPL17-213ENST00000581741 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
RPL17-213ENST00000581741 SHROOM4Q9ULL8 1493 aa15.81■□□□□ 0.12
RPL17-213ENST00000581741 CC2D2AQ9P2K1 1620 aa15.76■□□□□ 0.11
RPL17-213ENST00000581741 MSH5O43196 834 aa15.72■□□□□ 0.11
RPL17-213ENST00000581741 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
RPL17-213ENST00000581741 EIF4G1Q04637 1599 aaKnown RBP15.69■□□□□ 0.1
RPL17-213ENST00000581741 NCAPD3P42695 1498 aa15.16■□□□□ 0.02
RPL17-213ENST00000581741 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
RPL17-213ENST00000581741 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
RPL17-213ENST00000581741 SMARCA4P51532 1647 aa15.13■□□□□ 0.01
RPL17-213ENST00000581741 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
RPL17-213ENST00000581741 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
RPL17-213ENST00000581741 DNAJC5Q9H3Z4 198 aa15.05■□□□□ -0
RPL17-213ENST00000581741 HMGXB3Q12766 1538 aa15.05■□□□□ -0
RPL17-213ENST00000581741 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
RPL17-213ENST00000581741 CUX2O14529 1486 aa15.01□□□□□ -0.01
RPL17-213ENST00000581741 NESP48681 1621 aa14.95□□□□□ -0.02
RPL17-213ENST00000581741 POTEDQ86YR6 584 aa14.95□□□□□ -0.02
RPL17-213ENST00000581741 MROH2BQ7Z745 1585 aa14.92□□□□□ -0.02
RPL17-213ENST00000581741 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
RPL17-213ENST00000581741 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
RPL17-213ENST00000581741 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.03
RPL17-213ENST00000581741 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
RPL17-213ENST00000581741 WIZO95785 1651 aa14.8□□□□□ -0.04
RPL17-213ENST00000581741 THOC2Q8NI27 1593 aaKnown RBP14.77□□□□□ -0.05
RPL17-213ENST00000581741 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
RPL17-213ENST00000581741 MRC2Q9UBG0 1479 aa14.65□□□□□ -0.06
RPL17-213ENST00000581741 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
RPL17-213ENST00000581741 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
RPL17-213ENST00000581741 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
RPL17-213ENST00000581741 WDR62O43379 1518 aa14.57□□□□□ -0.08
RPL17-213ENST00000581741 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
RPL17-213ENST00000581741 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
RPL17-213ENST00000581741 MAPK8IP2Q13387 824 aaPredicted RBP14.56□□□□□ -0.08
RPL17-213ENST00000581741 CFTRP13569 1480 aa14.53□□□□□ -0.08
RPL17-213ENST00000581741 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
RPL17-213ENST00000581741 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
RPL17-213ENST00000581741 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
RPL17-213ENST00000581741 PPP4R3CPQ6ZMV5 832 aa14.46□□□□□ -0.09
RPL17-213ENST00000581741 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
RPL17-213ENST00000581741 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
RPL17-213ENST00000581741 CCDC88BA6NC98 1476 aa14.42□□□□□ -0.1
RPL17-213ENST00000581741 ABCC8Q09428 1581 aa14.32□□□□□ -0.12
RPL17-213ENST00000581741 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
RPL17-213ENST00000581741 TOPBP1Q92547 1522 aa14.3□□□□□ -0.12
RPL17-213ENST00000581741 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
RPL17-213ENST00000581741 DNMBPQ6XZF7 1577 aa14.25□□□□□ -0.13
RPL17-213ENST00000581741 FBLN2P98095 1184 aa14.24□□□□□ -0.13
RPL17-213ENST00000581741 EIF4G3O43432 1585 aaKnown RBP14.2□□□□□ -0.14
RPL17-213ENST00000581741 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.14
RPL17-213ENST00000581741 RIMBP3CA6NJZ7 1639 aa14.17□□□□□ -0.14
RPL17-213ENST00000581741 RIMBP3BA6NNM3 1639 aa14.17□□□□□ -0.14
RPL17-213ENST00000581741 RIMBP3Q9UFD9 1639 aa14.17□□□□□ -0.14
RPL17-213ENST00000581741 CHD1O14646 1710 aa14.16□□□□□ -0.14
RPL17-213ENST00000581741 SUPT5HO00267 1087 aaKnown RBP14.15□□□□□ -0.14
RPL17-213ENST00000581741 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
RPL17-213ENST00000581741 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
RPL17-213ENST00000581741 SOGA1O94964 1423 aa14.14□□□□□ -0.15
RPL17-213ENST00000581741 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
RPL17-213ENST00000581741 CYB5RLQ6IPT4 315 aa14.12□□□□□ -0.15
RPL17-213ENST00000581741 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
RPL17-213ENST00000581741 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
RPL17-213ENST00000581741 TDRD9Q8NDG6 1382 aaKnown RBP14.09□□□□□ -0.15
RPL17-213ENST00000581741 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
RPL17-213ENST00000581741 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
RPL17-213ENST00000581741 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
RPL17-213ENST00000581741 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
RPL17-213ENST00000581741 CUX1P39880 1505 aa14.03□□□□□ -0.16
RPL17-213ENST00000581741 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
RPL17-213ENST00000581741 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
RPL17-213ENST00000581741 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
RPL17-213ENST00000581741 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
RPL17-213ENST00000581741 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
RPL17-213ENST00000581741 MAGI1Q96QZ7 1491 aaPredicted RBP13.98□□□□□ -0.17
RPL17-213ENST00000581741 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
RPL17-213ENST00000581741 PBRM1Q86U86 1689 aa13.97□□□□□ -0.17
RPL17-213ENST00000581741 GAPVD1Q14C86 1478 aa13.95□□□□□ -0.18
RPL17-213ENST00000581741 ARAP1Q96P48 1450 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms