RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 NISCHQ9Y2I1 1504 aa24.93■■□□□ 1.58
CTC1-208ENST00000581671 ABCC9O60706 1549 aa23.99■■□□□ 1.43
CTC1-208ENST00000581671 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
CTC1-208ENST00000581671 CCDC180Q9P1Z9 1646 aa22.84■■□□□ 1.25
CTC1-208ENST00000581671 DNAJC5Q9H3Z4 198 aa22.43■■□□□ 1.18
CTC1-208ENST00000581671 RB1CC1Q8TDY2 1594 aa22.29■■□□□ 1.16
CTC1-208ENST00000581671 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
CTC1-208ENST00000581671 NACADO15069 1562 aa21.87■■□□□ 1.09
CTC1-208ENST00000581671 UNC13AQ9UPW8 1703 aa21.83■■□□□ 1.08
CTC1-208ENST00000581671 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
CTC1-208ENST00000581671 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
CTC1-208ENST00000581671 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
CTC1-208ENST00000581671 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
CTC1-208ENST00000581671 EIF4G1Q04637 1599 aaKnown RBP21.27■□□□□ 0.99
CTC1-208ENST00000581671 SHROOM4Q9ULL8 1493 aa21.26■□□□□ 0.99
CTC1-208ENST00000581671 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
CTC1-208ENST00000581671 CUX2O14529 1486 aa21.11■□□□□ 0.97
CTC1-208ENST00000581671 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
CTC1-208ENST00000581671 ERCC6Q03468 1493 aa20.77■□□□□ 0.92
CTC1-208ENST00000581671 SCRIBQ14160 1630 aa20.76■□□□□ 0.91
CTC1-208ENST00000581671 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
CTC1-208ENST00000581671 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
CTC1-208ENST00000581671 NESP48681 1621 aa20.3■□□□□ 0.84
CTC1-208ENST00000581671 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
CTC1-208ENST00000581671 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
CTC1-208ENST00000581671 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
CTC1-208ENST00000581671 ATAD2BQ9ULI0 1458 aa20■□□□□ 0.79
CTC1-208ENST00000581671 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
CTC1-208ENST00000581671 KIF21AQ7Z4S6 1674 aa19.98■□□□□ 0.79
CTC1-208ENST00000581671 OSCARQ8IYS5 282 aa19.98■□□□□ 0.79
CTC1-208ENST00000581671 BAZ1AQ9NRL2 1556 aaPredicted RBP19.98■□□□□ 0.79
CTC1-208ENST00000581671 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
CTC1-208ENST00000581671 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
CTC1-208ENST00000581671 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
CTC1-208ENST00000581671 RIMBP3CA6NJZ7 1639 aa19.84■□□□□ 0.77
CTC1-208ENST00000581671 RIMBP3BA6NNM3 1639 aa19.84■□□□□ 0.77
CTC1-208ENST00000581671 RIMBP3Q9UFD9 1639 aa19.84■□□□□ 0.77
CTC1-208ENST00000581671 MRC2Q9UBG0 1479 aa19.75■□□□□ 0.75
CTC1-208ENST00000581671 WDR62O43379 1518 aa19.75■□□□□ 0.75
CTC1-208ENST00000581671 TRHP20396 242 aaPredicted RBP19.74■□□□□ 0.75
CTC1-208ENST00000581671 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
CTC1-208ENST00000581671 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
CTC1-208ENST00000581671 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
CTC1-208ENST00000581671 CYB5RLQ6IPT4 315 aa19.61■□□□□ 0.73
CTC1-208ENST00000581671 CADPSQ9ULU8 1353 aa19.55■□□□□ 0.72
CTC1-208ENST00000581671 PEG3Q9GZU2 1588 aa19.5■□□□□ 0.71
CTC1-208ENST00000581671 CEP164Q9UPV0 1460 aa19.44■□□□□ 0.7
CTC1-208ENST00000581671 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
CTC1-208ENST00000581671 ILDR1Q86SU0 546 aaPredicted RBP19.38■□□□□ 0.69
CTC1-208ENST00000581671 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
CTC1-208ENST00000581671 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
CTC1-208ENST00000581671 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
CTC1-208ENST00000581671 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
CTC1-208ENST00000581671 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
CTC1-208ENST00000581671 CHD1O14646 1710 aa19.11■□□□□ 0.65
CTC1-208ENST00000581671 CFTRP13569 1480 aa19.09■□□□□ 0.65
CTC1-208ENST00000581671 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
CTC1-208ENST00000581671 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.64
CTC1-208ENST00000581671 FBLN2P98095 1184 aa19■□□□□ 0.63
CTC1-208ENST00000581671 WIZO95785 1651 aa18.92■□□□□ 0.62
CTC1-208ENST00000581671 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.626e-6■■■■□ 25.1
CTC1-208ENST00000581671 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
CTC1-208ENST00000581671 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
CTC1-208ENST00000581671 KDM4FA0A1W2PPD8 638 aa18.79■□□□□ 0.6
CTC1-208ENST00000581671 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
CTC1-208ENST00000581671 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.6
CTC1-208ENST00000581671 GAPVD1Q14C86 1478 aa18.76■□□□□ 0.59
CTC1-208ENST00000581671 SYNJ1O43426 1573 aa18.72■□□□□ 0.59
CTC1-208ENST00000581671 ABCC8Q09428 1581 aa18.69■□□□□ 0.58
CTC1-208ENST00000581671 KIF13AQ9H1H9 1805 aa18.66■□□□□ 0.58
CTC1-208ENST00000581671 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
CTC1-208ENST00000581671 DNMBPQ6XZF7 1577 aa18.66■□□□□ 0.58
CTC1-208ENST00000581671 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
CTC1-208ENST00000581671 TDRD9Q8NDG6 1382 aaKnown RBP18.6■□□□□ 0.57
CTC1-208ENST00000581671 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
CTC1-208ENST00000581671 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.57
CTC1-208ENST00000581671 RAD54L2Q9Y4B4 1467 aa18.55■□□□□ 0.56
CTC1-208ENST00000581671 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
CTC1-208ENST00000581671 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
CTC1-208ENST00000581671 SYNJ2O15056 1496 aa18.51■□□□□ 0.55
CTC1-208ENST00000581671 FBXO41Q8TF61 875 aa18.48■□□□□ 0.55
CTC1-208ENST00000581671 SOGA1O94964 1423 aa18.48■□□□□ 0.55
CTC1-208ENST00000581671 HECW2Q9P2P5 1572 aa18.46■□□□□ 0.55
CTC1-208ENST00000581671 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
CTC1-208ENST00000581671 KDM6BO15054 1643 aa18.43■□□□□ 0.54
CTC1-208ENST00000581671 FAM69CQ0P6D2 419 aa18.43■□□□□ 0.54
CTC1-208ENST00000581671 GRIN2BQ13224 1484 aa18.43■□□□□ 0.54
CTC1-208ENST00000581671 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
CTC1-208ENST00000581671 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.53
CTC1-208ENST00000581671 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
CTC1-208ENST00000581671 ADGRL1O94910 1474 aa18.34■□□□□ 0.53
CTC1-208ENST00000581671 LMTK3Q96Q04 1460 aa18.34■□□□□ 0.53
CTC1-208ENST00000581671 FGD5Q6ZNL6 1462 aa18.3■□□□□ 0.52
CTC1-208ENST00000581671 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
CTC1-208ENST00000581671 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
CTC1-208ENST00000581671 TSPOAP1O95153 1857 aa18.26■□□□□ 0.51
CTC1-208ENST00000581671 SHROOM2Q13796 1616 aa18.23■□□□□ 0.51
CTC1-208ENST00000581671 MAPKBP1O60336 1514 aa18.23■□□□□ 0.51
CTC1-208ENST00000581671 SOCS7O14512 581 aa18.22■□□□□ 0.51
CTC1-208ENST00000581671 GRIN2AQ12879 1464 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms