RNA–Protein interactions for RNA: ENST00000581589.5

KCTD2-206, Transcript of potassium channel tetramerization domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene KCTD2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD2-206ENST00000581589 NISCHQ9Y2I1 1504 aa19.1■□□□□ 0.65
KCTD2-206ENST00000581589 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
KCTD2-206ENST00000581589 ABCC9O60706 1549 aa16.85■□□□□ 0.29
KCTD2-206ENST00000581589 DCAF8L2P0C7V8 631 aa16.16■□□□□ 0.18
KCTD2-206ENST00000581589 RB1CC1Q8TDY2 1594 aa16.12■□□□□ 0.17
KCTD2-206ENST00000581589 NACADO15069 1562 aa16.04■□□□□ 0.16
KCTD2-206ENST00000581589 ZCCHC6Q5VYS8 1495 aaKnown RBP15.89■□□□□ 0.13
KCTD2-206ENST00000581589 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
KCTD2-206ENST00000581589 DCAF1Q9Y4B6 1507 aa15.75■□□□□ 0.11
KCTD2-206ENST00000581589 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
KCTD2-206ENST00000581589 UNC13AQ9UPW8 1703 aa15.71■□□□□ 0.11
KCTD2-206ENST00000581589 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
KCTD2-206ENST00000581589 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.08
KCTD2-206ENST00000581589 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
KCTD2-206ENST00000581589 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
KCTD2-206ENST00000581589 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
KCTD2-206ENST00000581589 CC2D2AQ9P2K1 1620 aa15.19■□□□□ 0.02
KCTD2-206ENST00000581589 CECR2Q9BXF3 1484 aa15.13■□□□□ 0.01
KCTD2-206ENST00000581589 SMARCA4P51532 1647 aa14.86□□□□□ -0.03
KCTD2-206ENST00000581589 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
KCTD2-206ENST00000581589 ATAD2BQ9ULI0 1458 aa14.8□□□□□ -0.04
KCTD2-206ENST00000581589 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
KCTD2-206ENST00000581589 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
KCTD2-206ENST00000581589 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
KCTD2-206ENST00000581589 BAZ1BQ9UIG0 1483 aaKnown RBP14.72□□□□□ -0.05
KCTD2-206ENST00000581589 HMGXB3Q12766 1538 aa14.71□□□□□ -0.05
KCTD2-206ENST00000581589 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
KCTD2-206ENST00000581589 WIZO95785 1651 aa14.58□□□□□ -0.07
KCTD2-206ENST00000581589 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
KCTD2-206ENST00000581589 NESP48681 1621 aa14.52□□□□□ -0.09
KCTD2-206ENST00000581589 RSF1Q96T23 1441 aaPredicted RBP14.51□□□□□ -0.09
KCTD2-206ENST00000581589 LAMC3Q9Y6N6 1575 aa14.44□□□□□ -0.1
KCTD2-206ENST00000581589 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
KCTD2-206ENST00000581589 CADPSQ9ULU8 1353 aa14.38□□□□□ -0.11
KCTD2-206ENST00000581589 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
KCTD2-206ENST00000581589 CUX2O14529 1486 aa14.37□□□□□ -0.11
KCTD2-206ENST00000581589 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
KCTD2-206ENST00000581589 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
KCTD2-206ENST00000581589 CFTRP13569 1480 aa14.25□□□□□ -0.13
KCTD2-206ENST00000581589 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
KCTD2-206ENST00000581589 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
KCTD2-206ENST00000581589 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
KCTD2-206ENST00000581589 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
KCTD2-206ENST00000581589 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
KCTD2-206ENST00000581589 WDR62O43379 1518 aa14.16□□□□□ -0.14
KCTD2-206ENST00000581589 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
KCTD2-206ENST00000581589 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
KCTD2-206ENST00000581589 DNAJC5Q9H3Z4 198 aa14.05□□□□□ -0.16
KCTD2-206ENST00000581589 TOPBP1Q92547 1522 aa13.99□□□□□ -0.17
KCTD2-206ENST00000581589 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
KCTD2-206ENST00000581589 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.17
KCTD2-206ENST00000581589 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
KCTD2-206ENST00000581589 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
KCTD2-206ENST00000581589 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
KCTD2-206ENST00000581589 FGD5Q6ZNL6 1462 aa13.83□□□□□ -0.2
KCTD2-206ENST00000581589 CUX1P39880 1505 aa13.83□□□□□ -0.2
KCTD2-206ENST00000581589 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.2
KCTD2-206ENST00000581589 RAD54L2Q9Y4B4 1467 aa13.82□□□□□ -0.2
KCTD2-206ENST00000581589 SOGA1O94964 1423 aa13.81□□□□□ -0.2
KCTD2-206ENST00000581589 TARBP1Q13395 1621 aaKnown RBP13.81□□□□□ -0.2
KCTD2-206ENST00000581589 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.24e-8■■■■■ 32.3
KCTD2-206ENST00000581589 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
KCTD2-206ENST00000581589 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
KCTD2-206ENST00000581589 FBLN2P98095 1184 aa13.75□□□□□ -0.21
KCTD2-206ENST00000581589 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.212e-6■■■□□ 18.8
KCTD2-206ENST00000581589 WDR97A6NE52 1622 aa13.69□□□□□ -0.22
KCTD2-206ENST00000581589 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
KCTD2-206ENST00000581589 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
KCTD2-206ENST00000581589 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
KCTD2-206ENST00000581589 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
KCTD2-206ENST00000581589 CHD1O14646 1710 aa13.67□□□□□ -0.22
KCTD2-206ENST00000581589 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
KCTD2-206ENST00000581589 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
KCTD2-206ENST00000581589 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
KCTD2-206ENST00000581589 CHMP7Q8WUX9 453 aaPredicted RBP13.65□□□□□ -0.22
KCTD2-206ENST00000581589 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
KCTD2-206ENST00000581589 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
KCTD2-206ENST00000581589 MAGI1Q96QZ7 1491 aaPredicted RBP13.63□□□□□ -0.23
KCTD2-206ENST00000581589 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
KCTD2-206ENST00000581589 SYNJ2O15056 1496 aa13.59□□□□□ -0.23
KCTD2-206ENST00000581589 RIMBP3CA6NJZ7 1639 aa13.57□□□□□ -0.24
KCTD2-206ENST00000581589 RIMBP3BA6NNM3 1639 aa13.57□□□□□ -0.24
KCTD2-206ENST00000581589 RIMBP3Q9UFD9 1639 aa13.57□□□□□ -0.24
KCTD2-206ENST00000581589 ARHGEF11O15085 1522 aa13.55□□□□□ -0.24
KCTD2-206ENST00000581589 ADAMTS12P58397 1594 aa13.51□□□□□ -0.25
KCTD2-206ENST00000581589 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
KCTD2-206ENST00000581589 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
KCTD2-206ENST00000581589 GRIN2AQ12879 1464 aa13.48□□□□□ -0.25
KCTD2-206ENST00000581589 FHAD1B1AJZ9 1412 aa13.48□□□□□ -0.25
KCTD2-206ENST00000581589 CYB5RLQ6IPT4 315 aa13.48□□□□□ -0.25
KCTD2-206ENST00000581589 KIF27Q86VH2 1401 aa13.46□□□□□ -0.26
KCTD2-206ENST00000581589 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
KCTD2-206ENST00000581589 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
KCTD2-206ENST00000581589 NUP160Q12769 1436 aa13.39□□□□□ -0.27
KCTD2-206ENST00000581589 IGF1RP08069 1367 aa13.37□□□□□ -0.27
KCTD2-206ENST00000581589 CUL7Q14999 1698 aa13.37□□□□□ -0.27
KCTD2-206ENST00000581589 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
KCTD2-206ENST00000581589 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
KCTD2-206ENST00000581589 RUSC2Q8N2Y8 1516 aa13.31□□□□□ -0.28
KCTD2-206ENST00000581589 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms