RNA–Protein interactions for RNA: ENST00000581419.1

SKAP1-205, Transcript of src kinase associated phosphoprotein 1, humanhuman

TSL 3

Gene SKAP1, Length 696 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-205ENST00000581419 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
SKAP1-205ENST00000581419 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
SKAP1-205ENST00000581419 NISCHQ9Y2I1 1504 aa19.07■□□□□ 0.64
SKAP1-205ENST00000581419 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
SKAP1-205ENST00000581419 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
SKAP1-205ENST00000581419 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
SKAP1-205ENST00000581419 ABCC9O60706 1549 aa16.43■□□□□ 0.22
SKAP1-205ENST00000581419 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
SKAP1-205ENST00000581419 NACADO15069 1562 aa15.93■□□□□ 0.14
SKAP1-205ENST00000581419 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
SKAP1-205ENST00000581419 RB1CC1Q8TDY2 1594 aa15.89■□□□□ 0.13
SKAP1-205ENST00000581419 DCAF8L2P0C7V8 631 aa15.89■□□□□ 0.13
SKAP1-205ENST00000581419 ZCCHC6Q5VYS8 1495 aaKnown RBP15.87■□□□□ 0.13
SKAP1-205ENST00000581419 DCAF1Q9Y4B6 1507 aa15.85■□□□□ 0.13
SKAP1-205ENST00000581419 FOXD1Q16676 465 aa15.72■□□□□ 0.11
SKAP1-205ENST00000581419 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
SKAP1-205ENST00000581419 DNAJC5Q9H3Z4 198 aa15.45■□□□□ 0.06
SKAP1-205ENST00000581419 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
SKAP1-205ENST00000581419 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
SKAP1-205ENST00000581419 BICRAQ9NZM4 1560 aa15.37■□□□□ 0.05
SKAP1-205ENST00000581419 SCRIBQ14160 1630 aa15.33■□□□□ 0.04
SKAP1-205ENST00000581419 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.04
SKAP1-205ENST00000581419 PPP6R1Q9UPN7 881 aa14.97□□□□□ -0.01
SKAP1-205ENST00000581419 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
SKAP1-205ENST00000581419 ADRA2BP18089 450 aa14.96□□□□□ -0.01
SKAP1-205ENST00000581419 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
SKAP1-205ENST00000581419 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
SKAP1-205ENST00000581419 CECR2Q9BXF3 1484 aa14.81□□□□□ -0.04
SKAP1-205ENST00000581419 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
SKAP1-205ENST00000581419 NCAPD3P42695 1498 aa14.73□□□□□ -0.05
SKAP1-205ENST00000581419 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
SKAP1-205ENST00000581419 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
SKAP1-205ENST00000581419 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
SKAP1-205ENST00000581419 MSH5O43196 834 aa14.67□□□□□ -0.06
SKAP1-205ENST00000581419 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
SKAP1-205ENST00000581419 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
SKAP1-205ENST00000581419 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
SKAP1-205ENST00000581419 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
SKAP1-205ENST00000581419 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
SKAP1-205ENST00000581419 WIZO95785 1651 aa14.46□□□□□ -0.09
SKAP1-205ENST00000581419 CUX2O14529 1486 aa14.38□□□□□ -0.11
SKAP1-205ENST00000581419 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
SKAP1-205ENST00000581419 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
SKAP1-205ENST00000581419 CADPSQ9ULU8 1353 aa14.29□□□□□ -0.12
SKAP1-205ENST00000581419 LAMC3Q9Y6N6 1575 aa14.27□□□□□ -0.12
SKAP1-205ENST00000581419 NESP48681 1621 aa14.23□□□□□ -0.13
SKAP1-205ENST00000581419 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
SKAP1-205ENST00000581419 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.13
SKAP1-205ENST00000581419 CFTRP13569 1480 aa14.2□□□□□ -0.14
SKAP1-205ENST00000581419 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
SKAP1-205ENST00000581419 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
SKAP1-205ENST00000581419 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
SKAP1-205ENST00000581419 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
SKAP1-205ENST00000581419 KIF21AQ7Z4S6 1674 aa14.02□□□□□ -0.16
SKAP1-205ENST00000581419 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
SKAP1-205ENST00000581419 PRDM2Q13029 1718 aa13.99□□□□□ -0.17
SKAP1-205ENST00000581419 THOC2Q8NI27 1593 aaKnown RBP13.99□□□□□ -0.17
SKAP1-205ENST00000581419 WDR62O43379 1518 aa13.95□□□□□ -0.18
SKAP1-205ENST00000581419 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
SKAP1-205ENST00000581419 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.19
SKAP1-205ENST00000581419 SCAF1Q9H7N4 1312 aaKnown RBP13.87□□□□□ -0.19
SKAP1-205ENST00000581419 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
SKAP1-205ENST00000581419 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
SKAP1-205ENST00000581419 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
SKAP1-205ENST00000581419 PPP4R3CPQ6ZMV5 832 aa13.77□□□□□ -0.21
SKAP1-205ENST00000581419 CUX1P39880 1505 aa13.74□□□□□ -0.21
SKAP1-205ENST00000581419 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
SKAP1-205ENST00000581419 SOGA1O94964 1423 aa13.72□□□□□ -0.21
SKAP1-205ENST00000581419 WRNQ14191 1432 aaPredicted RBP eCLIP13.72□□□□□ -0.21
SKAP1-205ENST00000581419 FGD5Q6ZNL6 1462 aa13.68□□□□□ -0.22
SKAP1-205ENST00000581419 TARBP1Q13395 1621 aaKnown RBP13.67□□□□□ -0.22
SKAP1-205ENST00000581419 TOP2BQ02880 1626 aa13.65□□□□□ -0.22
SKAP1-205ENST00000581419 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
SKAP1-205ENST00000581419 RAD54L2Q9Y4B4 1467 aa13.64□□□□□ -0.23
SKAP1-205ENST00000581419 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
SKAP1-205ENST00000581419 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
SKAP1-205ENST00000581419 TDRD9Q8NDG6 1382 aaKnown RBP13.6□□□□□ -0.23
SKAP1-205ENST00000581419 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
SKAP1-205ENST00000581419 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
SKAP1-205ENST00000581419 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
SKAP1-205ENST00000581419 AQRO60306 1485 aaKnown RBP eCLIP13.6□□□□□ -0.23
SKAP1-205ENST00000581419 OSCARQ8IYS5 282 aa13.56□□□□□ -0.24
SKAP1-205ENST00000581419 EIF4G3O43432 1585 aaKnown RBP13.56□□□□□ -0.24
SKAP1-205ENST00000581419 RIMBP3CA6NJZ7 1639 aa13.55□□□□□ -0.24
SKAP1-205ENST00000581419 RIMBP3BA6NNM3 1639 aa13.55□□□□□ -0.24
SKAP1-205ENST00000581419 RIMBP3Q9UFD9 1639 aa13.55□□□□□ -0.24
SKAP1-205ENST00000581419 GRIN2BQ13224 1484 aa13.54□□□□□ -0.24
SKAP1-205ENST00000581419 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
SKAP1-205ENST00000581419 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
SKAP1-205ENST00000581419 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
SKAP1-205ENST00000581419 MAGI1Q96QZ7 1491 aaPredicted RBP13.49□□□□□ -0.25
SKAP1-205ENST00000581419 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
SKAP1-205ENST00000581419 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.25
SKAP1-205ENST00000581419 CHMP7Q8WUX9 453 aaPredicted RBP13.46□□□□□ -0.25
SKAP1-205ENST00000581419 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
SKAP1-205ENST00000581419 KIF27Q86VH2 1401 aa13.46□□□□□ -0.26
SKAP1-205ENST00000581419 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
SKAP1-205ENST00000581419 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
SKAP1-205ENST00000581419 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
SKAP1-205ENST00000581419 FBLN2P98095 1184 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms