RNA–Protein interactions for RNA: ENST00000581391.5

CUEDC1-209, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-209ENST00000581391 NISCHQ9Y2I1 1504 aa33.14■■■□□ 2.9
CUEDC1-209ENST00000581391 CCDC180Q9P1Z9 1646 aa29.35■■■□□ 2.29
CUEDC1-209ENST00000581391 ABCC9O60706 1549 aa29.03■■■□□ 2.24
CUEDC1-209ENST00000581391 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
CUEDC1-209ENST00000581391 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
CUEDC1-209ENST00000581391 NACADO15069 1562 aa27.66■■■□□ 2.02
CUEDC1-209ENST00000581391 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
CUEDC1-209ENST00000581391 MYO15BQ96JP2 1530 aa27.4■■□□□ 1.98
CUEDC1-209ENST00000581391 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
CUEDC1-209ENST00000581391 PABPN1Q86U42 306 aaKnown RBP eCLIP27.22■■□□□ 1.95
CUEDC1-209ENST00000581391 UNC13AQ9UPW8 1703 aa27.19■■□□□ 1.94
CUEDC1-209ENST00000581391 BICRAQ9NZM4 1560 aa26.99■■□□□ 1.91
CUEDC1-209ENST00000581391 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
CUEDC1-209ENST00000581391 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
CUEDC1-209ENST00000581391 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
CUEDC1-209ENST00000581391 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
CUEDC1-209ENST00000581391 CC2D2AQ9P2K1 1620 aa26.18■■□□□ 1.78
CUEDC1-209ENST00000581391 CECR2Q9BXF3 1484 aa26.02■■□□□ 1.76
CUEDC1-209ENST00000581391 SMARCA4P51532 1647 aa25.71■■□□□ 1.71
CUEDC1-209ENST00000581391 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
CUEDC1-209ENST00000581391 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
CUEDC1-209ENST00000581391 MROH2BQ7Z745 1585 aa25.61■■□□□ 1.69
CUEDC1-209ENST00000581391 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
CUEDC1-209ENST00000581391 SMARCA2P51531 1590 aa25.49■■□□□ 1.67
CUEDC1-209ENST00000581391 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.66
CUEDC1-209ENST00000581391 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
CUEDC1-209ENST00000581391 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
CUEDC1-209ENST00000581391 WIZO95785 1651 aa25.34■■□□□ 1.65
CUEDC1-209ENST00000581391 RSF1Q96T23 1441 aaPredicted RBP25.29■■□□□ 1.64
CUEDC1-209ENST00000581391 NESP48681 1621 aa25.13■■□□□ 1.61
CUEDC1-209ENST00000581391 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
CUEDC1-209ENST00000581391 ERCC6Q03468 1493 aa24.94■■□□□ 1.58
CUEDC1-209ENST00000581391 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
CUEDC1-209ENST00000581391 LAMC3Q9Y6N6 1575 aa24.85■■□□□ 1.57
CUEDC1-209ENST00000581391 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
CUEDC1-209ENST00000581391 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
CUEDC1-209ENST00000581391 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
CUEDC1-209ENST00000581391 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
CUEDC1-209ENST00000581391 CFTRP13569 1480 aa24.68■■□□□ 1.54
CUEDC1-209ENST00000581391 THOC2Q8NI27 1593 aaKnown RBP24.62■■□□□ 1.53
CUEDC1-209ENST00000581391 CUX2O14529 1486 aa24.61■■□□□ 1.53
CUEDC1-209ENST00000581391 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.53
CUEDC1-209ENST00000581391 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
CUEDC1-209ENST00000581391 MRC2Q9UBG0 1479 aa24.5■■□□□ 1.51
CUEDC1-209ENST00000581391 PRDM2Q13029 1718 aa24.4■■□□□ 1.5
CUEDC1-209ENST00000581391 WDR62O43379 1518 aa24.4■■□□□ 1.5
CUEDC1-209ENST00000581391 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
CUEDC1-209ENST00000581391 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
CUEDC1-209ENST00000581391 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
CUEDC1-209ENST00000581391 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
CUEDC1-209ENST00000581391 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
CUEDC1-209ENST00000581391 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
CUEDC1-209ENST00000581391 CUX1P39880 1505 aa24.01■■□□□ 1.43
CUEDC1-209ENST00000581391 IFT140Q96RY7 1462 aa24■■□□□ 1.43
CUEDC1-209ENST00000581391 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
CUEDC1-209ENST00000581391 RAD54L2Q9Y4B4 1467 aa23.97■■□□□ 1.43
CUEDC1-209ENST00000581391 FGD5Q6ZNL6 1462 aa23.92■■□□□ 1.42
CUEDC1-209ENST00000581391 SOGA1O94964 1423 aa23.91■■□□□ 1.42
CUEDC1-209ENST00000581391 TARBP1Q13395 1621 aaKnown RBP23.91■■□□□ 1.42
CUEDC1-209ENST00000581391 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.42
CUEDC1-209ENST00000581391 TDRD9Q8NDG6 1382 aaKnown RBP23.85■■□□□ 1.41
CUEDC1-209ENST00000581391 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
CUEDC1-209ENST00000581391 WRNQ14191 1432 aaPredicted RBP eCLIP23.8■■□□□ 1.4
CUEDC1-209ENST00000581391 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
CUEDC1-209ENST00000581391 OSCARQ8IYS5 282 aa23.72■■□□□ 1.39
CUEDC1-209ENST00000581391 TOP2BQ02880 1626 aa23.71■■□□□ 1.39
CUEDC1-209ENST00000581391 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
CUEDC1-209ENST00000581391 FBLN2P98095 1184 aa23.66■■□□□ 1.38
CUEDC1-209ENST00000581391 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
CUEDC1-209ENST00000581391 ABCA10Q8WWZ4 1543 aa23.63■■□□□ 1.37
CUEDC1-209ENST00000581391 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
CUEDC1-209ENST00000581391 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
CUEDC1-209ENST00000581391 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
CUEDC1-209ENST00000581391 CHD1O14646 1710 aa23.56■■□□□ 1.36
CUEDC1-209ENST00000581391 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
CUEDC1-209ENST00000581391 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
CUEDC1-209ENST00000581391 CHMP7Q8WUX9 453 aaPredicted RBP23.51■■□□□ 1.35
CUEDC1-209ENST00000581391 MAGI1Q96QZ7 1491 aaPredicted RBP23.47■■□□□ 1.35
CUEDC1-209ENST00000581391 SYNJ2O15056 1496 aa23.42■■□□□ 1.34
CUEDC1-209ENST00000581391 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
CUEDC1-209ENST00000581391 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
CUEDC1-209ENST00000581391 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
CUEDC1-209ENST00000581391 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
CUEDC1-209ENST00000581391 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
CUEDC1-209ENST00000581391 ERICH3Q5RHP9 1530 aa23.31■■□□□ 1.32
CUEDC1-209ENST00000581391 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
CUEDC1-209ENST00000581391 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
CUEDC1-209ENST00000581391 IGF1RP08069 1367 aa23.28■■□□□ 1.32
CUEDC1-209ENST00000581391 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
CUEDC1-209ENST00000581391 GRIN2AQ12879 1464 aa23.28■■□□□ 1.32
CUEDC1-209ENST00000581391 CLASP1Q7Z460 1538 aa23.27■■□□□ 1.32
CUEDC1-209ENST00000581391 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
CUEDC1-209ENST00000581391 CYB5RLQ6IPT4 315 aa23.21■■□□□ 1.31
CUEDC1-209ENST00000581391 CEP170Q5SW79 1584 aa23.2■■□□□ 1.3
CUEDC1-209ENST00000581391 NUP160Q12769 1436 aa23.17■■□□□ 1.3
CUEDC1-209ENST00000581391 CARMIL1Q5VZK9 1371 aa23.13■■□□□ 1.29
CUEDC1-209ENST00000581391 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
CUEDC1-209ENST00000581391 ERCC6L2Q5T890 1561 aa23.08■■□□□ 1.29
CUEDC1-209ENST00000581391 CUL7Q14999 1698 aa23.06■■□□□ 1.28
CUEDC1-209ENST00000581391 JPH4Q96JJ6 628 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms