RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 NISCHQ9Y2I1 1504 aa31.37■■■□□ 2.61
CDC42EP4-207ENST00000581045 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
CDC42EP4-207ENST00000581045 ABCC9O60706 1549 aa27.16■■□□□ 1.94
CDC42EP4-207ENST00000581045 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
CDC42EP4-207ENST00000581045 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
CDC42EP4-207ENST00000581045 RB1CC1Q8TDY2 1594 aa26.13■■□□□ 1.77
CDC42EP4-207ENST00000581045 NACADO15069 1562 aa26.11■■□□□ 1.77
CDC42EP4-207ENST00000581045 MYO15BQ96JP2 1530 aa25.91■■□□□ 1.74
CDC42EP4-207ENST00000581045 DCAF1Q9Y4B6 1507 aa25.89■■□□□ 1.74
CDC42EP4-207ENST00000581045 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
CDC42EP4-207ENST00000581045 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
CDC42EP4-207ENST00000581045 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.66
CDC42EP4-207ENST00000581045 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
CDC42EP4-207ENST00000581045 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
CDC42EP4-207ENST00000581045 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
CDC42EP4-207ENST00000581045 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
CDC42EP4-207ENST00000581045 CC2D2AQ9P2K1 1620 aa24.56■■□□□ 1.52
CDC42EP4-207ENST00000581045 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.51
CDC42EP4-207ENST00000581045 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
CDC42EP4-207ENST00000581045 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
CDC42EP4-207ENST00000581045 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
CDC42EP4-207ENST00000581045 ATAD2BQ9ULI0 1458 aa24.13■■□□□ 1.45
CDC42EP4-207ENST00000581045 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
CDC42EP4-207ENST00000581045 NCAPD3P42695 1498 aa24.04■■□□□ 1.44
CDC42EP4-207ENST00000581045 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
CDC42EP4-207ENST00000581045 WIZO95785 1651 aa24.03■■□□□ 1.44
CDC42EP4-207ENST00000581045 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
CDC42EP4-207ENST00000581045 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
CDC42EP4-207ENST00000581045 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
CDC42EP4-207ENST00000581045 TOP2AP11388 1531 aaKnown RBP23.72■■□□□ 1.39
CDC42EP4-207ENST00000581045 SUPT5HO00267 1087 aaKnown RBP23.58■■□□□ 1.37
CDC42EP4-207ENST00000581045 NESP48681 1621 aa23.55■■□□□ 1.36
CDC42EP4-207ENST00000581045 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
CDC42EP4-207ENST00000581045 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
CDC42EP4-207ENST00000581045 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
CDC42EP4-207ENST00000581045 CADPSQ9ULU8 1353 aa23.38■■□□□ 1.33
CDC42EP4-207ENST00000581045 KIF21AQ7Z4S6 1674 aa23.33■■□□□ 1.33
CDC42EP4-207ENST00000581045 CFTRP13569 1480 aa23.27■■□□□ 1.32
CDC42EP4-207ENST00000581045 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
CDC42EP4-207ENST00000581045 PRDM2Q13029 1718 aa23.25■■□□□ 1.31
CDC42EP4-207ENST00000581045 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
CDC42EP4-207ENST00000581045 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.3
CDC42EP4-207ENST00000581045 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
CDC42EP4-207ENST00000581045 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
CDC42EP4-207ENST00000581045 CUX2O14529 1486 aa22.99■■□□□ 1.27
CDC42EP4-207ENST00000581045 WDR62O43379 1518 aa22.96■■□□□ 1.27
CDC42EP4-207ENST00000581045 URB2Q14146 1524 aaKnown RBP22.93■■□□□ 1.26
CDC42EP4-207ENST00000581045 TOPBP1Q92547 1522 aa22.82■■□□□ 1.24
CDC42EP4-207ENST00000581045 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
CDC42EP4-207ENST00000581045 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
CDC42EP4-207ENST00000581045 CUX1P39880 1505 aa22.72■■□□□ 1.23
CDC42EP4-207ENST00000581045 POLA1P09884 1462 aaPredicted RBP22.62■■□□□ 1.21
CDC42EP4-207ENST00000581045 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
CDC42EP4-207ENST00000581045 WRNQ14191 1432 aaPredicted RBP eCLIP22.61■■□□□ 1.21
CDC42EP4-207ENST00000581045 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
CDC42EP4-207ENST00000581045 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
CDC42EP4-207ENST00000581045 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
CDC42EP4-207ENST00000581045 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
CDC42EP4-207ENST00000581045 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
CDC42EP4-207ENST00000581045 TARBP1Q13395 1621 aaKnown RBP22.56■■□□□ 1.2
CDC42EP4-207ENST00000581045 ZNF608Q9ULD9 1512 aaPredicted RBP22.53■■□□□ 1.2
CDC42EP4-207ENST00000581045 SOGA1O94964 1423 aa22.53■■□□□ 1.2
CDC42EP4-207ENST00000581045 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
CDC42EP4-207ENST00000581045 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
CDC42EP4-207ENST00000581045 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
CDC42EP4-207ENST00000581045 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
CDC42EP4-207ENST00000581045 ABCA10Q8WWZ4 1543 aa22.35■■□□□ 1.17
CDC42EP4-207ENST00000581045 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
CDC42EP4-207ENST00000581045 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
CDC42EP4-207ENST00000581045 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
CDC42EP4-207ENST00000581045 GRIN2BQ13224 1484 aa22.23■■□□□ 1.15
CDC42EP4-207ENST00000581045 SNAPC4Q5SXM2 1469 aa22.23■■□□□ 1.15
CDC42EP4-207ENST00000581045 CHD1O14646 1710 aa22.23■■□□□ 1.15
CDC42EP4-207ENST00000581045 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
CDC42EP4-207ENST00000581045 FBLN2P98095 1184 aa22.17■■□□□ 1.14
CDC42EP4-207ENST00000581045 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
CDC42EP4-207ENST00000581045 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
CDC42EP4-207ENST00000581045 ERICH3Q5RHP9 1530 aa22.1■■□□□ 1.13
CDC42EP4-207ENST00000581045 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
CDC42EP4-207ENST00000581045 DNAJC5Q9H3Z4 198 aa22.08■■□□□ 1.13
CDC42EP4-207ENST00000581045 SYNJ2O15056 1496 aa22.08■■□□□ 1.12
CDC42EP4-207ENST00000581045 OSCARQ8IYS5 282 aa22.07■■□□□ 1.12
CDC42EP4-207ENST00000581045 CHMP7Q8WUX9 453 aaPredicted RBP22.07■■□□□ 1.12
CDC42EP4-207ENST00000581045 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
CDC42EP4-207ENST00000581045 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
CDC42EP4-207ENST00000581045 FHAD1B1AJZ9 1412 aa22■■□□□ 1.11
CDC42EP4-207ENST00000581045 CUL7Q14999 1698 aa21.98■■□□□ 1.11
CDC42EP4-207ENST00000581045 IGF1RP08069 1367 aa21.97■■□□□ 1.11
CDC42EP4-207ENST00000581045 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
CDC42EP4-207ENST00000581045 CEP170Q5SW79 1584 aa21.9■■□□□ 1.1
CDC42EP4-207ENST00000581045 CLASP1Q7Z460 1538 aa21.88■■□□□ 1.09
CDC42EP4-207ENST00000581045 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
CDC42EP4-207ENST00000581045 FAM9AQ8IZU1 332 aaPredicted RBP21.83■■□□□ 1.09
CDC42EP4-207ENST00000581045 NUP160Q12769 1436 aa21.82■■□□□ 1.08
CDC42EP4-207ENST00000581045 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
CDC42EP4-207ENST00000581045 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
CDC42EP4-207ENST00000581045 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
CDC42EP4-207ENST00000581045 ARHGEF11O15085 1522 aa21.77■■□□□ 1.08
CDC42EP4-207ENST00000581045 RAPGEF2Q9Y4G8 1499 aa21.77■■□□□ 1.07
CDC42EP4-207ENST00000581045 EEA1Q15075 1411 aa21.75■■□□□ 1.07
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