RNA–Protein interactions for RNA: ENST00000580989.5

EPB41L3-222, Transcript of erythrocyte membrane protein band 4.1 like 3, human

TSL 4

Gene EPB41L3, Length 552 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L3-222	ENST00000580989	NISCH	Q9Y2I1	1504 aa		39.7	■■■■□ 3.95
EPB41L3-222	ENST00000580989	CCDC180	Q9P1Z9	1646 aa		34.86	■■■■□ 3.17
EPB41L3-222	ENST00000580989	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.37	■■■□□ 2.93
EPB41L3-222	ENST00000580989	DCAF1	Q9Y4B6	1507 aa		33	■■■□□ 2.87
EPB41L3-222	ENST00000580989	ABCC9	O60706	1549 aa		32.81	■■■□□ 2.84
EPB41L3-222	ENST00000580989	MYO15B	Q96JP2	1530 aa		32.72	■■■□□ 2.83
EPB41L3-222	ENST00000580989	NACAD	O15069	1562 aa		32.45	■■■□□ 2.79
EPB41L3-222	ENST00000580989	DCAF8L2	P0C7V8	631 aa		32.43	■■■□□ 2.78
EPB41L3-222	ENST00000580989	RB1CC1	Q8TDY2	1594 aa		32.18	■■■□□ 2.74
EPB41L3-222	ENST00000580989	SHROOM4	Q9ULL8	1493 aa		31.91	■■■□□ 2.7
EPB41L3-222	ENST00000580989	SCRIB	Q14160	1630 aa		31.78	■■■□□ 2.68
EPB41L3-222	ENST00000580989	UNC13A	Q9UPW8	1703 aa		31.46	■■■□□ 2.63
EPB41L3-222	ENST00000580989	BICRA	Q9NZM4	1560 aa		31.17	■■■□□ 2.58
EPB41L3-222	ENST00000580989	PABPN1	Q86U42	306 aa	Known RBP eCLIP	30.78	■■■□□ 2.52
EPB41L3-222	ENST00000580989	CECR2	Q9BXF3	1484 aa		30.74	■■■□□ 2.51
EPB41L3-222	ENST00000580989	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.71	■■■□□ 2.51
EPB41L3-222	ENST00000580989	RSF1	Q96T23	1441 aa	Predicted RBP	30.66	■■■□□ 2.5
EPB41L3-222	ENST00000580989	SUPT5H	O00267	1087 aa	Known RBP	30.6	■■■□□ 2.49
EPB41L3-222	ENST00000580989	MROH2B	Q7Z745	1585 aa		30.59	■■■□□ 2.49
EPB41L3-222	ENST00000580989	SMARCA4	P51532	1647 aa		30.57	■■■□□ 2.48
EPB41L3-222	ENST00000580989	PEG3	Q9GZU2	1588 aa		30.32	■■■□□ 2.44
EPB41L3-222	ENST00000580989	WIZ	O95785	1651 aa		30.31	■■■□□ 2.44
EPB41L3-222	ENST00000580989	EIF4G1	Q04637	1599 aa	Known RBP	30.24	■■■□□ 2.43
EPB41L3-222	ENST00000580989	SMARCA2	P51531	1590 aa		30.14	■■■□□ 2.42
EPB41L3-222	ENST00000580989	TOP2A	P11388	1531 aa	Known RBP	30.12	■■■□□ 2.41
EPB41L3-222	ENST00000580989	ATAD2B	Q9ULI0	1458 aa		30.08	■■■□□ 2.41
EPB41L3-222	ENST00000580989	HMGXB3	Q12766	1538 aa		29.91	■■■□□ 2.38
EPB41L3-222	ENST00000580989	NCAPD3	P42695	1498 aa		29.91	■■■□□ 2.38
EPB41L3-222	ENST00000580989	BAZ1B	Q9UIG0	1483 aa	Known RBP	29.88	■■■□□ 2.37
EPB41L3-222	ENST00000580989	CC2D2A	Q9P2K1	1620 aa		29.79	■■■□□ 2.36
EPB41L3-222	ENST00000580989	CCDC88B	A6NC98	1476 aa		29.7	■■■□□ 2.35
EPB41L3-222	ENST00000580989	CHIC1	Q5VXU3	224 aa		29.33	■■■□□ 2.29
EPB41L3-222	ENST00000580989	CFTR	P13569	1480 aa		29.17	■■■□□ 2.26
EPB41L3-222	ENST00000580989	PRDM2	Q13029	1718 aa		29.11	■■■□□ 2.25
EPB41L3-222	ENST00000580989	CADPS	Q9ULU8	1353 aa		29.06	■■■□□ 2.24
EPB41L3-222	ENST00000580989	DNAJC5B	Q9UF47	199 aa		28.99	■■■□□ 2.23
EPB41L3-222	ENST00000580989	ABCC8	Q09428	1581 aa		28.95	■■■□□ 2.22
EPB41L3-222	ENST00000580989	LAMC3	Q9Y6N6	1575 aa		28.95	■■■□□ 2.22
EPB41L3-222	ENST00000580989	TRIM41	Q8WV44	630 aa		28.9	■■■□□ 2.22
EPB41L3-222	ENST00000580989	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.87	■■■□□ 2.21
EPB41L3-222	ENST00000580989	SYNJ1	O43426	1573 aa		28.76	■■■□□ 2.19
EPB41L3-222	ENST00000580989	BIVM-ERCC5	R4GMW8	1640 aa		28.76	■■■□□ 2.19
EPB41L3-222	ENST00000580989	NES	P48681	1621 aa		28.75	■■■□□ 2.19
EPB41L3-222	ENST00000580989	TOP2B	Q02880	1626 aa		28.74	■■■□□ 2.19
EPB41L3-222	ENST00000580989	FANCD2	Q9BXW9	1451 aa		28.72	■■■□□ 2.19
EPB41L3-222	ENST00000580989	PDS5B	Q9NTI5	1447 aa		28.66	■■■□□ 2.18
EPB41L3-222	ENST00000580989	CUX1	P39880	1505 aa		28.64	■■■□□ 2.17
EPB41L3-222	ENST00000580989	CEP164	Q9UPV0	1460 aa		28.59	■■■□□ 2.17
EPB41L3-222	ENST00000580989	DNMBP	Q6XZF7	1577 aa		28.52	■■■□□ 2.16
EPB41L3-222	ENST00000580989	KIF21A	Q7Z4S6	1674 aa		28.5	■■■□□ 2.15
EPB41L3-222	ENST00000580989	EEA1	Q15075	1411 aa		28.49	■■■□□ 2.15
EPB41L3-222	ENST00000580989	TOPBP1	Q92547	1522 aa		28.42	■■■□□ 2.14
EPB41L3-222	ENST00000580989	URB2	Q14146	1524 aa	Known RBP	28.38	■■■□□ 2.13
EPB41L3-222	ENST00000580989	SOGA1	O94964	1423 aa		28.35	■■■□□ 2.13
EPB41L3-222	ENST00000580989	FGD5	Q6ZNL6	1462 aa		28.34	■■■□□ 2.13
EPB41L3-222	ENST00000580989	MRC2	Q9UBG0	1479 aa		28.32	■■■□□ 2.12
EPB41L3-222	ENST00000580989	POLA1	P09884	1462 aa	Predicted RBP	28.26	■■■□□ 2.11
EPB41L3-222	ENST00000580989	RUSC2	Q8N2Y8	1516 aa		28.23	■■■□□ 2.11
EPB41L3-222	ENST00000580989	WDR62	O43379	1518 aa		28.23	■■■□□ 2.11
EPB41L3-222	ENST00000580989	ERCC6	Q03468	1493 aa		28.2	■■■□□ 2.1
EPB41L3-222	ENST00000580989	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.19	■■■□□ 2.1
EPB41L3-222	ENST00000580989	KIF27	Q86VH2	1401 aa		28.18	■■■□□ 2.1
EPB41L3-222	ENST00000580989	ABCA10	Q8WWZ4	1543 aa		28.17	■■■□□ 2.1
EPB41L3-222	ENST00000580989	THOC2	Q8NI27	1593 aa	Known RBP	28.16	■■■□□ 2.1
EPB41L3-222	ENST00000580989	WDR97	A6NE52	1622 aa		28.14	■■■□□ 2.1
EPB41L3-222	ENST00000580989	CSRNP3	Q8WYN3	585 aa		28.14	■■■□□ 2.1
EPB41L3-222	ENST00000580989	KIF21B	O75037	1637 aa		28.1	■■■□□ 2.09
EPB41L3-222	ENST00000580989	CUX2	O14529	1486 aa		28.09	■■■□□ 2.09
EPB41L3-222	ENST00000580989	RAD54L2	Q9Y4B4	1467 aa		28.06	■■■□□ 2.08
EPB41L3-222	ENST00000580989	TARBP1	Q13395	1621 aa	Known RBP	28.05	■■■□□ 2.08
EPB41L3-222	ENST00000580989	LOC105371045	A0A1W2PR82	267 aa		28.04	■■■□□ 2.08
EPB41L3-222	ENST00000580989	GOLGA3	Q08378	1498 aa		28	■■■□□ 2.07
EPB41L3-222	ENST00000580989	PRX	Q9BXM0	1461 aa		27.98	■■■□□ 2.07
EPB41L3-222	ENST00000580989	ABCA5	Q8WWZ7	1642 aa		27.98	■■■□□ 2.07
EPB41L3-222	ENST00000580989	ERICH3	Q5RHP9	1530 aa		27.97	■■■□□ 2.07
EPB41L3-222	ENST00000580989	IFT140	Q96RY7	1462 aa		27.96	■■■□□ 2.07
EPB41L3-222	ENST00000580989	IGF1R	P08069	1367 aa		27.89	■■■□□ 2.06
EPB41L3-222	ENST00000580989	TNIK	Q9UKE5	1360 aa		27.86	■■■□□ 2.05
EPB41L3-222	ENST00000580989	CUL7	Q14999	1698 aa		27.85	■■■□□ 2.05
EPB41L3-222	ENST00000580989	GAPVD1	Q14C86	1478 aa		27.83	■■■□□ 2.05
EPB41L3-222	ENST00000580989	RAPGEF2	Q9Y4G8	1499 aa		27.83	■■■□□ 2.05
EPB41L3-222	ENST00000580989	TDRD9	Q8NDG6	1382 aa	Known RBP	27.77	■■■□□ 2.04
EPB41L3-222	ENST00000580989	PBRM1	Q86U86	1689 aa		27.75	■■■□□ 2.03
EPB41L3-222	ENST00000580989	CARMIL1	Q5VZK9	1371 aa		27.74	■■■□□ 2.03
EPB41L3-222	ENST00000580989	EIF4G3	O43432	1585 aa	Known RBP	27.69	■■■□□ 2.02
EPB41L3-222	ENST00000580989	GRIN2B	Q13224	1484 aa		27.69	■■■□□ 2.02
EPB41L3-222	ENST00000580989	ZNF608	Q9ULD9	1512 aa	Predicted RBP	27.68	■■■□□ 2.02
EPB41L3-222	ENST00000580989	UBTF	P17480	764 aa	Known RBP	27.66	■■■□□ 2.02
EPB41L3-222	ENST00000580989	EHMT2	Q96KQ7	1210 aa		27.66	■■■□□ 2.02
EPB41L3-222	ENST00000580989	AQR	O60306	1485 aa	Known RBP eCLIP	27.64	■■■□□ 2.02
EPB41L3-222	ENST00000580989	CEP162	Q5TB80	1403 aa		27.64	■■■□□ 2.02
EPB41L3-222	ENST00000580989	ADAMTS12	P58397	1594 aa		27.61	■■■□□ 2.01
EPB41L3-222	ENST00000580989	FHAD1	B1AJZ9	1412 aa		27.58	■■■□□ 2
EPB41L3-222	ENST00000580989	MAGI1	Q96QZ7	1491 aa	Predicted RBP	27.52	■■■□□ 2
EPB41L3-222	ENST00000580989	SNAPC4	Q5SXM2	1469 aa		27.48	■■□□□ 1.99
EPB41L3-222	ENST00000580989	CLIP1	P30622	1438 aa		27.48	■■□□□ 1.99
EPB41L3-222	ENST00000580989	CTTNBP2	Q8WZ74	1663 aa		27.47	■■□□□ 1.99
EPB41L3-222	ENST00000580989	SYNJ2	O15056	1496 aa		27.38	■■□□□ 1.97
EPB41L3-222	ENST00000580989	GRIN2A	Q12879	1464 aa		27.34	■■□□□ 1.97
EPB41L3-222	ENST00000580989	EFCAB5	A4FU69	1503 aa		27.31	■■□□□ 1.96

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms