RNA–Protein interactions for RNA: ENST00000580983.1

MTMR4-205, Transcript of myotubularin related protein 4, humanhuman

TSL 3

Gene MTMR4, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR4-205ENST00000580983 NISCHQ9Y2I1 1504 aa32.73■■■□□ 2.83
MTMR4-205ENST00000580983 AEBP2Q6ZN18 517 aaPredicted RBP30.07■■■□□ 2.4
MTMR4-205ENST00000580983 CHIC1Q5VXU3 224 aa29.06■■■□□ 2.24
MTMR4-205ENST00000580983 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
MTMR4-205ENST00000580983 ABCC9O60706 1549 aa27.77■■■□□ 2.04
MTMR4-205ENST00000580983 ZCCHC6Q5VYS8 1495 aaKnown RBP27.36■■□□□ 1.97
MTMR4-205ENST00000580983 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
MTMR4-205ENST00000580983 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
MTMR4-205ENST00000580983 NACADO15069 1562 aa27.12■■□□□ 1.93
MTMR4-205ENST00000580983 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
MTMR4-205ENST00000580983 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
MTMR4-205ENST00000580983 UNC13AQ9UPW8 1703 aa26.44■■□□□ 1.82
MTMR4-205ENST00000580983 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
MTMR4-205ENST00000580983 BICRAQ9NZM4 1560 aa26.13■■□□□ 1.77
MTMR4-205ENST00000580983 SHROOM4Q9ULL8 1493 aa26.02■■□□□ 1.76
MTMR4-205ENST00000580983 PABPN1Q86U42 306 aaKnown RBP eCLIP25.98■■□□□ 1.75
MTMR4-205ENST00000580983 PHF23Q9BUL5 403 aaPredicted RBP25.54■■□□□ 1.68
MTMR4-205ENST00000580983 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
MTMR4-205ENST00000580983 EIF4G1Q04637 1599 aaKnown RBP25.43■■□□□ 1.66
MTMR4-205ENST00000580983 BAZ1AQ9NRL2 1556 aaPredicted RBP25.38■■□□□ 1.65
MTMR4-205ENST00000580983 CECR2Q9BXF3 1484 aa25.37■■□□□ 1.65
MTMR4-205ENST00000580983 SMARCA4P51532 1647 aa25.32■■□□□ 1.64
MTMR4-205ENST00000580983 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.62
MTMR4-205ENST00000580983 MROH2BQ7Z745 1585 aa25.19■■□□□ 1.62
MTMR4-205ENST00000580983 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
MTMR4-205ENST00000580983 SMARCA2P51531 1590 aa25.09■■□□□ 1.61
MTMR4-205ENST00000580983 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
MTMR4-205ENST00000580983 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
MTMR4-205ENST00000580983 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
MTMR4-205ENST00000580983 WIZO95785 1651 aa24.97■■□□□ 1.59
MTMR4-205ENST00000580983 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
MTMR4-205ENST00000580983 HMGXB3Q12766 1538 aa24.92■■□□□ 1.58
MTMR4-205ENST00000580983 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
MTMR4-205ENST00000580983 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
MTMR4-205ENST00000580983 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
MTMR4-205ENST00000580983 CCDC88BA6NC98 1476 aa24.42■■□□□ 1.5
MTMR4-205ENST00000580983 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
MTMR4-205ENST00000580983 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
MTMR4-205ENST00000580983 CFTRP13569 1480 aa24.21■■□□□ 1.47
MTMR4-205ENST00000580983 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
MTMR4-205ENST00000580983 NESP48681 1621 aa24.16■■□□□ 1.46
MTMR4-205ENST00000580983 PDS5BQ9NTI5 1447 aa24.09■■□□□ 1.45
MTMR4-205ENST00000580983 KIF21AQ7Z4S6 1674 aa23.98■■□□□ 1.43
MTMR4-205ENST00000580983 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
MTMR4-205ENST00000580983 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
MTMR4-205ENST00000580983 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
MTMR4-205ENST00000580983 MRC2Q9UBG0 1479 aa23.79■■□□□ 1.4
MTMR4-205ENST00000580983 THOC2Q8NI27 1593 aaKnown RBP23.77■■□□□ 1.4
MTMR4-205ENST00000580983 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
MTMR4-205ENST00000580983 FOXD1Q16676 465 aa23.75■■□□□ 1.39
MTMR4-205ENST00000580983 WDR62O43379 1518 aa23.7■■□□□ 1.38
MTMR4-205ENST00000580983 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
MTMR4-205ENST00000580983 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
MTMR4-205ENST00000580983 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.38
MTMR4-205ENST00000580983 TOPBP1Q92547 1522 aa23.64■■□□□ 1.38
MTMR4-205ENST00000580983 CUX1P39880 1505 aa23.61■■□□□ 1.37
MTMR4-205ENST00000580983 BIVM-ERCC5R4GMW8 1640 aa23.61■■□□□ 1.37
MTMR4-205ENST00000580983 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
MTMR4-205ENST00000580983 CUX2O14529 1486 aa23.58■■□□□ 1.37
MTMR4-205ENST00000580983 SYNJ1O43426 1573 aa23.56■■□□□ 1.36
MTMR4-205ENST00000580983 FGD5Q6ZNL6 1462 aa23.47■■□□□ 1.35
MTMR4-205ENST00000580983 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
MTMR4-205ENST00000580983 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
MTMR4-205ENST00000580983 IFT140Q96RY7 1462 aa23.42■■□□□ 1.34
MTMR4-205ENST00000580983 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
MTMR4-205ENST00000580983 SOGA1O94964 1423 aa23.38■■□□□ 1.33
MTMR4-205ENST00000580983 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
MTMR4-205ENST00000580983 WDR97A6NE52 1622 aa23.32■■□□□ 1.32
MTMR4-205ENST00000580983 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
MTMR4-205ENST00000580983 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
MTMR4-205ENST00000580983 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
MTMR4-205ENST00000580983 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
MTMR4-205ENST00000580983 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
MTMR4-205ENST00000580983 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
MTMR4-205ENST00000580983 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.29
MTMR4-205ENST00000580983 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
MTMR4-205ENST00000580983 PBRM1Q86U86 1689 aa23.12■■□□□ 1.29
MTMR4-205ENST00000580983 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.296e-6■■■■□ 25.1
MTMR4-205ENST00000580983 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
MTMR4-205ENST00000580983 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
MTMR4-205ENST00000580983 EEA1Q15075 1411 aa23.06■■□□□ 1.28
MTMR4-205ENST00000580983 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
MTMR4-205ENST00000580983 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
MTMR4-205ENST00000580983 CUL7Q14999 1698 aa22.97■■□□□ 1.27
MTMR4-205ENST00000580983 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
MTMR4-205ENST00000580983 IGF1RP08069 1367 aa22.94■■□□□ 1.26
MTMR4-205ENST00000580983 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
MTMR4-205ENST00000580983 FHAD1B1AJZ9 1412 aa22.9■■□□□ 1.26
MTMR4-205ENST00000580983 CSRNP3Q8WYN3 585 aa22.88■■□□□ 1.25
MTMR4-205ENST00000580983 SYNJ2O15056 1496 aa22.87■■□□□ 1.25
MTMR4-205ENST00000580983 CHD1O14646 1710 aa22.84■■□□□ 1.25
MTMR4-205ENST00000580983 CARMIL1Q5VZK9 1371 aa22.84■■□□□ 1.25
MTMR4-205ENST00000580983 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
MTMR4-205ENST00000580983 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
MTMR4-205ENST00000580983 PRXQ9BXM0 1461 aa22.79■■□□□ 1.24
MTMR4-205ENST00000580983 RAPGEF2Q9Y4G8 1499 aa22.79■■□□□ 1.24
MTMR4-205ENST00000580983 KIF21BO75037 1637 aa22.77■■□□□ 1.24
MTMR4-205ENST00000580983 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
MTMR4-205ENST00000580983 FBLN2P98095 1184 aa22.75■■□□□ 1.23
MTMR4-205ENST00000580983 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms