RNA–Protein interactions for RNA: ENST00000580834.5

MPDU1-220, Transcript of mannose-P-dolichol utilization defect 1, humanhuman

TSL 5

Gene MPDU1, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MPDU1-220ENST00000580834 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
MPDU1-220ENST00000580834 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
MPDU1-220ENST00000580834 ABCC9O60706 1549 aa15.97■□□□□ 0.15
MPDU1-220ENST00000580834 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
MPDU1-220ENST00000580834 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.06
MPDU1-220ENST00000580834 NACADO15069 1562 aa15.45■□□□□ 0.06
MPDU1-220ENST00000580834 RB1CC1Q8TDY2 1594 aa15.43■□□□□ 0.06
MPDU1-220ENST00000580834 MYO15BQ96JP2 1530 aa15.42■□□□□ 0.06
MPDU1-220ENST00000580834 DCAF1Q9Y4B6 1507 aa15.37■□□□□ 0.05
MPDU1-220ENST00000580834 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
MPDU1-220ENST00000580834 SHROOM4Q9ULL8 1493 aa14.97□□□□□ -0.01
MPDU1-220ENST00000580834 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
MPDU1-220ENST00000580834 BICRAQ9NZM4 1560 aa14.82□□□□□ -0.04
MPDU1-220ENST00000580834 UNC13AQ9UPW8 1703 aa14.81□□□□□ -0.04
MPDU1-220ENST00000580834 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
MPDU1-220ENST00000580834 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
MPDU1-220ENST00000580834 CECR2Q9BXF3 1484 aa14.4□□□□□ -0.1
MPDU1-220ENST00000580834 SUPT5HO00267 1087 aaKnown RBP14.39□□□□□ -0.11
MPDU1-220ENST00000580834 CC2D2AQ9P2K1 1620 aa14.39□□□□□ -0.11
MPDU1-220ENST00000580834 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
MPDU1-220ENST00000580834 NCAPD3P42695 1498 aa14.3□□□□□ -0.12
MPDU1-220ENST00000580834 SMARCA4P51532 1647 aa14.3□□□□□ -0.12
MPDU1-220ENST00000580834 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
MPDU1-220ENST00000580834 SMARCA2P51531 1590 aa14.29□□□□□ -0.12
MPDU1-220ENST00000580834 ATAD2BQ9ULI0 1458 aa14.28□□□□□ -0.12
MPDU1-220ENST00000580834 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
MPDU1-220ENST00000580834 BAZ1BQ9UIG0 1483 aaKnown RBP14.18□□□□□ -0.14
MPDU1-220ENST00000580834 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
MPDU1-220ENST00000580834 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
MPDU1-220ENST00000580834 WIZO95785 1651 aa14.08□□□□□ -0.16
MPDU1-220ENST00000580834 TOP2AP11388 1531 aaKnown RBP13.97□□□□□ -0.17
MPDU1-220ENST00000580834 CADPSQ9ULU8 1353 aa13.93□□□□□ -0.18
MPDU1-220ENST00000580834 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
MPDU1-220ENST00000580834 CHIC1Q5VXU3 224 aa13.86□□□□□ -0.19
MPDU1-220ENST00000580834 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
MPDU1-220ENST00000580834 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
MPDU1-220ENST00000580834 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.19
MPDU1-220ENST00000580834 CFTRP13569 1480 aa13.8□□□□□ -0.2
MPDU1-220ENST00000580834 NESP48681 1621 aa13.8□□□□□ -0.2
MPDU1-220ENST00000580834 FANCD2Q9BXW9 1451 aa13.7□□□□□ -0.22
MPDU1-220ENST00000580834 CEP164Q9UPV0 1460 aa13.67□□□□□ -0.22
MPDU1-220ENST00000580834 CUX2O14529 1486 aa13.62□□□□□ -0.23
MPDU1-220ENST00000580834 MRC2Q9UBG0 1479 aa13.61□□□□□ -0.23
MPDU1-220ENST00000580834 ABCC8Q09428 1581 aa13.59□□□□□ -0.23
MPDU1-220ENST00000580834 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
MPDU1-220ENST00000580834 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
MPDU1-220ENST00000580834 WDR62O43379 1518 aa13.49□□□□□ -0.25
MPDU1-220ENST00000580834 THOC2Q8NI27 1593 aaKnown RBP13.49□□□□□ -0.25
MPDU1-220ENST00000580834 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
MPDU1-220ENST00000580834 PRDM2Q13029 1718 aa13.47□□□□□ -0.25
MPDU1-220ENST00000580834 TOPBP1Q92547 1522 aa13.45□□□□□ -0.26
MPDU1-220ENST00000580834 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
MPDU1-220ENST00000580834 DNMBPQ6XZF7 1577 aa13.43□□□□□ -0.26
MPDU1-220ENST00000580834 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
MPDU1-220ENST00000580834 SOGA1O94964 1423 aa13.4□□□□□ -0.26
MPDU1-220ENST00000580834 SYNJ1O43426 1573 aa13.37□□□□□ -0.27
MPDU1-220ENST00000580834 CUX1P39880 1505 aa13.36□□□□□ -0.27
MPDU1-220ENST00000580834 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
MPDU1-220ENST00000580834 FGD5Q6ZNL6 1462 aa13.33□□□□□ -0.28
MPDU1-220ENST00000580834 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
MPDU1-220ENST00000580834 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
MPDU1-220ENST00000580834 TDRD9Q8NDG6 1382 aaKnown RBP13.3□□□□□ -0.28
MPDU1-220ENST00000580834 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
MPDU1-220ENST00000580834 BIVM-ERCC5R4GMW8 1640 aa13.28□□□□□ -0.28
MPDU1-220ENST00000580834 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
MPDU1-220ENST00000580834 AQRO60306 1485 aaKnown RBP eCLIP13.26□□□□□ -0.292e-6■■■■■ 43
MPDU1-220ENST00000580834 RUSC2Q8N2Y8 1516 aa13.25□□□□□ -0.29
MPDU1-220ENST00000580834 OSCARQ8IYS5 282 aa13.25□□□□□ -0.29
MPDU1-220ENST00000580834 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
MPDU1-220ENST00000580834 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
MPDU1-220ENST00000580834 FBLN2P98095 1184 aa13.23□□□□□ -0.29
MPDU1-220ENST00000580834 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
MPDU1-220ENST00000580834 TARBP1Q13395 1621 aaKnown RBP13.22□□□□□ -0.29
MPDU1-220ENST00000580834 GAPVD1Q14C86 1478 aa13.21□□□□□ -0.3
MPDU1-220ENST00000580834 EEA1Q15075 1411 aa13.21□□□□□ -0.3
MPDU1-220ENST00000580834 WDR97A6NE52 1622 aa13.21□□□□□ -0.3
MPDU1-220ENST00000580834 GRIN2BQ13224 1484 aa13.2□□□□□ -0.3
MPDU1-220ENST00000580834 KIF27Q86VH2 1401 aa13.19□□□□□ -0.3
MPDU1-220ENST00000580834 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
MPDU1-220ENST00000580834 CSRNP3Q8WYN3 585 aa13.15□□□□□ -0.3
MPDU1-220ENST00000580834 EIF4G3O43432 1585 aaKnown RBP13.13□□□□□ -0.31
MPDU1-220ENST00000580834 MAGI1Q96QZ7 1491 aaPredicted RBP13.13□□□□□ -0.31
MPDU1-220ENST00000580834 IGF1RP08069 1367 aa13.11□□□□□ -0.31
MPDU1-220ENST00000580834 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
MPDU1-220ENST00000580834 ERICH3Q5RHP9 1530 aa13.09□□□□□ -0.31
MPDU1-220ENST00000580834 FHAD1B1AJZ9 1412 aa13.09□□□□□ -0.31
MPDU1-220ENST00000580834 SYNJ2O15056 1496 aa13.08□□□□□ -0.32
MPDU1-220ENST00000580834 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
MPDU1-220ENST00000580834 CARMIL1Q5VZK9 1371 aa13.06□□□□□ -0.32
MPDU1-220ENST00000580834 KIF21BO75037 1637 aa13.05□□□□□ -0.32
MPDU1-220ENST00000580834 ABCA5Q8WWZ7 1642 aa13.05□□□□□ -0.32
MPDU1-220ENST00000580834 PRXQ9BXM0 1461 aa13.03□□□□□ -0.32
MPDU1-220ENST00000580834 TNIKQ9UKE5 1360 aa13.02□□□□□ -0.33
MPDU1-220ENST00000580834 GOLGA3Q08378 1498 aa13.02□□□□□ -0.33
MPDU1-220ENST00000580834 RAPGEF2Q9Y4G8 1499 aa12.99□□□□□ -0.33
MPDU1-220ENST00000580834 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
MPDU1-220ENST00000580834 PBRM1Q86U86 1689 aa12.96□□□□□ -0.33
MPDU1-220ENST00000580834 JPH4Q96JJ6 628 aa12.95□□□□□ -0.34
MPDU1-220ENST00000580834 UBTFP17480 764 aaKnown RBP12.93□□□□□ -0.34
MPDU1-220ENST00000580834 CEP162Q5TB80 1403 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms