RNA–Protein interactions for RNA: ENST00000580404.5

PLEKHM1-206, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 5

Gene PLEKHM1, Length 2,628 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-206ENST00000580404 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
PLEKHM1-206ENST00000580404 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
PLEKHM1-206ENST00000580404 SHROOM4Q9ULL8 1493 aa29.14■■■□□ 2.26
PLEKHM1-206ENST00000580404 ZCCHC6Q5VYS8 1495 aaKnown RBP28.95■■■□□ 2.22
PLEKHM1-206ENST00000580404 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
PLEKHM1-206ENST00000580404 SUPT5HO00267 1087 aaKnown RBP28.23■■■□□ 2.11
PLEKHM1-206ENST00000580404 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
PLEKHM1-206ENST00000580404 ABCC9O60706 1549 aa27.99■■■□□ 2.07
PLEKHM1-206ENST00000580404 SCRIBQ14160 1630 aa27.7■■■□□ 2.03
PLEKHM1-206ENST00000580404 MYO15BQ96JP2 1530 aa27.42■■□□□ 1.98
PLEKHM1-206ENST00000580404 NACADO15069 1562 aa27.34■■□□□ 1.97
PLEKHM1-206ENST00000580404 RB1CC1Q8TDY2 1594 aa27.08■■□□□ 1.92
PLEKHM1-206ENST00000580404 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
PLEKHM1-206ENST00000580404 RSF1Q96T23 1441 aaPredicted RBP27■■□□□ 1.91
PLEKHM1-206ENST00000580404 CECR2Q9BXF3 1484 aa26.96■■□□□ 1.91
PLEKHM1-206ENST00000580404 UNC13AQ9UPW8 1703 aa26.8■■□□□ 1.88
PLEKHM1-206ENST00000580404 MROH2BQ7Z745 1585 aa26.77■■□□□ 1.88
PLEKHM1-206ENST00000580404 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
PLEKHM1-206ENST00000580404 WIZO95785 1651 aa26.64■■□□□ 1.86
PLEKHM1-206ENST00000580404 BAZ1AQ9NRL2 1556 aaPredicted RBP26.42■■□□□ 1.82
PLEKHM1-206ENST00000580404 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
PLEKHM1-206ENST00000580404 LOC105371045A0A1W2PR82 267 aa26.34■■□□□ 1.81
PLEKHM1-206ENST00000580404 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
PLEKHM1-206ENST00000580404 TRIM41Q8WV44 630 aa26.23■■□□□ 1.79
PLEKHM1-206ENST00000580404 FAM9AQ8IZU1 332 aaPredicted RBP26.16■■□□□ 1.78
PLEKHM1-206ENST00000580404 EHMT2Q96KQ7 1210 aa26.1■■□□□ 1.77
PLEKHM1-206ENST00000580404 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
PLEKHM1-206ENST00000580404 CCDC88BA6NC98 1476 aa26.02■■□□□ 1.76
PLEKHM1-206ENST00000580404 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
PLEKHM1-206ENST00000580404 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
PLEKHM1-206ENST00000580404 ABCC8Q09428 1581 aa25.88■■□□□ 1.73
PLEKHM1-206ENST00000580404 ATAD2BQ9ULI0 1458 aa25.78■■□□□ 1.72
PLEKHM1-206ENST00000580404 PEG3Q9GZU2 1588 aa25.74■■□□□ 1.71
PLEKHM1-206ENST00000580404 BAZ1BQ9UIG0 1483 aaKnown RBP25.7■■□□□ 1.71
PLEKHM1-206ENST00000580404 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
PLEKHM1-206ENST00000580404 SOGA1O94964 1423 aa25.46■■□□□ 1.67
PLEKHM1-206ENST00000580404 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
PLEKHM1-206ENST00000580404 WRNQ14191 1432 aaPredicted RBP eCLIP25.38■■□□□ 1.65
PLEKHM1-206ENST00000580404 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
PLEKHM1-206ENST00000580404 PPARGC1BQ86YN6 1023 aaKnown RBP25.32■■□□□ 1.64
PLEKHM1-206ENST00000580404 NCAPD3P42695 1498 aa25.31■■□□□ 1.64
PLEKHM1-206ENST00000580404 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
PLEKHM1-206ENST00000580404 TRIM26Q12899 539 aaPredicted RBP25.17■■□□□ 1.62
PLEKHM1-206ENST00000580404 CSRNP3Q8WYN3 585 aa25.16■■□□□ 1.62
PLEKHM1-206ENST00000580404 CC2D2AQ9P2K1 1620 aa25.14■■□□□ 1.62
PLEKHM1-206ENST00000580404 HRCP23327 699 aa25.12■■□□□ 1.61
PLEKHM1-206ENST00000580404 UBTFP17480 764 aaKnown RBP25.11■■□□□ 1.61
PLEKHM1-206ENST00000580404 TTBK1Q5TCY1 1321 aaPredicted RBP25.08■■□□□ 1.6
PLEKHM1-206ENST00000580404 CEP162Q5TB80 1403 aa25.01■■□□□ 1.6
PLEKHM1-206ENST00000580404 EEA1Q15075 1411 aa24.99■■□□□ 1.59
PLEKHM1-206ENST00000580404 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
PLEKHM1-206ENST00000580404 CFTRP13569 1480 aa24.98■■□□□ 1.59
PLEKHM1-206ENST00000580404 RANGAP1P46060 587 aaPredicted RBP24.98■■□□□ 1.59
PLEKHM1-206ENST00000580404 CUX1P39880 1505 aa24.95■■□□□ 1.59
PLEKHM1-206ENST00000580404 GOLGA3Q08378 1498 aa24.92■■□□□ 1.58
PLEKHM1-206ENST00000580404 TNIKQ9UKE5 1360 aa24.91■■□□□ 1.58
PLEKHM1-206ENST00000580404 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
PLEKHM1-206ENST00000580404 RAPGEF2Q9Y4G8 1499 aa24.86■■□□□ 1.57
PLEKHM1-206ENST00000580404 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
PLEKHM1-206ENST00000580404 CADPSQ9ULU8 1353 aa24.83■■□□□ 1.57
PLEKHM1-206ENST00000580404 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.56
PLEKHM1-206ENST00000580404 KIF21BO75037 1637 aa24.78■■□□□ 1.56
PLEKHM1-206ENST00000580404 NESP48681 1621 aa24.78■■□□□ 1.56
PLEKHM1-206ENST00000580404 PRDM2Q13029 1718 aa24.76■■□□□ 1.55
PLEKHM1-206ENST00000580404 CLIP1P30622 1438 aa24.66■■□□□ 1.54
PLEKHM1-206ENST00000580404 FANCD2Q9BXW9 1451 aa24.65■■□□□ 1.54
PLEKHM1-206ENST00000580404 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
PLEKHM1-206ENST00000580404 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
PLEKHM1-206ENST00000580404 CUX2O14529 1486 aa24.59■■□□□ 1.53
PLEKHM1-206ENST00000580404 PRXQ9BXM0 1461 aa24.57■■□□□ 1.52
PLEKHM1-206ENST00000580404 RAD54L2Q9Y4B4 1467 aa24.49■■□□□ 1.51
PLEKHM1-206ENST00000580404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.48■■□□□ 1.51
PLEKHM1-206ENST00000580404 ERICH3Q5RHP9 1530 aa24.46■■□□□ 1.51
PLEKHM1-206ENST00000580404 VPS8Q8N3P4 1428 aa24.43■■□□□ 1.5
PLEKHM1-206ENST00000580404 IGF1RP08069 1367 aa24.42■■□□□ 1.5
PLEKHM1-206ENST00000580404 TOPBP1Q92547 1522 aa24.41■■□□□ 1.5
PLEKHM1-206ENST00000580404 DNMBPQ6XZF7 1577 aa24.38■■□□□ 1.49
PLEKHM1-206ENST00000580404 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
PLEKHM1-206ENST00000580404 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
PLEKHM1-206ENST00000580404 ARAP1Q96P48 1450 aa24.35■■□□□ 1.49
PLEKHM1-206ENST00000580404 LAMC3Q9Y6N6 1575 aa24.35■■□□□ 1.49
PLEKHM1-206ENST00000580404 APLP2Q06481 763 aa24.32■■□□□ 1.48
PLEKHM1-206ENST00000580404 CARMIL1Q5VZK9 1371 aa24.32■■□□□ 1.48
PLEKHM1-206ENST00000580404 KIF21AQ7Z4S6 1674 aa24.31■■□□□ 1.48
PLEKHM1-206ENST00000580404 CCER1Q8TC90 406 aaPredicted RBP24.29■■□□□ 1.48
PLEKHM1-206ENST00000580404 HNRNPUL2Q1KMD3 747 aaKnown RBP24.26■■□□□ 1.47
PLEKHM1-206ENST00000580404 ARHGAP35Q9NRY4 1499 aa24.23■■□□□ 1.47
PLEKHM1-206ENST00000580404 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
PLEKHM1-206ENST00000580404 P3H3Q8IVL6 736 aa24.22■■□□□ 1.47
PLEKHM1-206ENST00000580404 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
PLEKHM1-206ENST00000580404 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
PLEKHM1-206ENST00000580404 KANK4Q5T7N3 995 aaPredicted RBP24.21■■□□□ 1.47
PLEKHM1-206ENST00000580404 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
PLEKHM1-206ENST00000580404 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
PLEKHM1-206ENST00000580404 ATP1B4Q9UN42 357 aaPredicted RBP24.05■■□□□ 1.44
PLEKHM1-206ENST00000580404 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
PLEKHM1-206ENST00000580404 ABCA5Q8WWZ7 1642 aa24■■□□□ 1.43
PLEKHM1-206ENST00000580404 FHOD3Q2V2M9 1422 aa23.99■■□□□ 1.43
PLEKHM1-206ENST00000580404 CUL7Q14999 1698 aa23.97■■□□□ 1.43
PLEKHM1-206ENST00000580404 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms