RNA–Protein interactions for RNA: ENST00000580197.5

LINC00668-204, long intergenic non-protein coding RNA 668, humanhuman

TSL 2 BASIC

Gene LINC00668, Length 2,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00668-204ENST00000580197 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
LINC00668-204ENST00000580197 CCDC180Q9P1Z9 1646 aa21.71■■□□□ 1.07
LINC00668-204ENST00000580197 ABCC9O60706 1549 aa21.59■■□□□ 1.05
LINC00668-204ENST00000580197 DCAF8L2P0C7V8 631 aa21.05■□□□□ 0.96
LINC00668-204ENST00000580197 PELP1Q8IZL8 1130 aaKnown RBP20.87■□□□□ 0.93
LINC00668-204ENST00000580197 MYT1Q01538 1121 aa20.67■□□□□ 0.9
LINC00668-204ENST00000580197 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
LINC00668-204ENST00000580197 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
LINC00668-204ENST00000580197 NACADO15069 1562 aa20.48■□□□□ 0.87
LINC00668-204ENST00000580197 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
LINC00668-204ENST00000580197 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
LINC00668-204ENST00000580197 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
LINC00668-204ENST00000580197 SCRIBQ14160 1630 aa20.1■□□□□ 0.81
LINC00668-204ENST00000580197 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
LINC00668-204ENST00000580197 BICRAQ9NZM4 1560 aa19.96■□□□□ 0.79
LINC00668-204ENST00000580197 TTBK1Q5TCY1 1321 aaPredicted RBP19.94■□□□□ 0.78
LINC00668-204ENST00000580197 SHROOM4Q9ULL8 1493 aa19.89■□□□□ 0.77
LINC00668-204ENST00000580197 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
LINC00668-204ENST00000580197 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
LINC00668-204ENST00000580197 CC2D2AQ9P2K1 1620 aa19.39■□□□□ 0.69
LINC00668-204ENST00000580197 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
LINC00668-204ENST00000580197 HRCP23327 699 aa19.1■□□□□ 0.65
LINC00668-204ENST00000580197 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
LINC00668-204ENST00000580197 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
LINC00668-204ENST00000580197 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
LINC00668-204ENST00000580197 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
LINC00668-204ENST00000580197 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
LINC00668-204ENST00000580197 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
LINC00668-204ENST00000580197 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
LINC00668-204ENST00000580197 WIZO95785 1651 aa18.89■□□□□ 0.61
LINC00668-204ENST00000580197 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
LINC00668-204ENST00000580197 ERICH6Q7L0X2 663 aa18.85■□□□□ 0.61
LINC00668-204ENST00000580197 PRKCSHP14314 528 aaPredicted RBP18.8■□□□□ 0.6
LINC00668-204ENST00000580197 HMGXB3Q12766 1538 aa18.79■□□□□ 0.6
LINC00668-204ENST00000580197 PEG3Q9GZU2 1588 aa18.79■□□□□ 0.6
LINC00668-204ENST00000580197 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
LINC00668-204ENST00000580197 NESP48681 1621 aa18.69■□□□□ 0.58
LINC00668-204ENST00000580197 APLP2Q06481 763 aa18.66■□□□□ 0.58
LINC00668-204ENST00000580197 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
LINC00668-204ENST00000580197 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
LINC00668-204ENST00000580197 ERCC6Q03468 1493 aa18.56■□□□□ 0.56
LINC00668-204ENST00000580197 CADPSQ9ULU8 1353 aa18.49■□□□□ 0.55
LINC00668-204ENST00000580197 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
LINC00668-204ENST00000580197 BCL11AQ9H165 835 aa18.45■□□□□ 0.54
LINC00668-204ENST00000580197 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
LINC00668-204ENST00000580197 LAMC3Q9Y6N6 1575 aa18.41■□□□□ 0.54
LINC00668-204ENST00000580197 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
LINC00668-204ENST00000580197 KIF21AQ7Z4S6 1674 aa18.33■□□□□ 0.53
LINC00668-204ENST00000580197 CFTRP13569 1480 aa18.33■□□□□ 0.52
LINC00668-204ENST00000580197 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
LINC00668-204ENST00000580197 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
LINC00668-204ENST00000580197 THOC2Q8NI27 1593 aaKnown RBP18.19■□□□□ 0.5
LINC00668-204ENST00000580197 CENPBP07199 599 aaPredicted RBP18.18■□□□□ 0.5
LINC00668-204ENST00000580197 MRC2Q9UBG0 1479 aa18.17■□□□□ 0.5
LINC00668-204ENST00000580197 CUX2O14529 1486 aa18.15■□□□□ 0.5
LINC00668-204ENST00000580197 FAM9AQ8IZU1 332 aaPredicted RBP18.12■□□□□ 0.49
LINC00668-204ENST00000580197 PPARGC1BQ86YN6 1023 aaKnown RBP18.11■□□□□ 0.49
LINC00668-204ENST00000580197 URB2Q14146 1524 aaKnown RBP18.1■□□□□ 0.49
LINC00668-204ENST00000580197 WDR62O43379 1518 aa18.05■□□□□ 0.48
LINC00668-204ENST00000580197 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
LINC00668-204ENST00000580197 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
LINC00668-204ENST00000580197 ACIN1Q9UKV3 1341 aaKnown RBP17.93■□□□□ 0.46
LINC00668-204ENST00000580197 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.45
LINC00668-204ENST00000580197 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
LINC00668-204ENST00000580197 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
LINC00668-204ENST00000580197 DAXXQ9UER7 740 aaPredicted RBP17.87■□□□□ 0.45
LINC00668-204ENST00000580197 CUX1P39880 1505 aa17.87■□□□□ 0.45
LINC00668-204ENST00000580197 ZNF608Q9ULD9 1512 aaPredicted RBP17.87■□□□□ 0.45
LINC00668-204ENST00000580197 POLA1P09884 1462 aaPredicted RBP17.84■□□□□ 0.45
LINC00668-204ENST00000580197 ZEB1P37275 1124 aaPredicted RBP17.84■□□□□ 0.45
LINC00668-204ENST00000580197 SOGA1O94964 1423 aa17.83■□□□□ 0.44
LINC00668-204ENST00000580197 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.44
LINC00668-204ENST00000580197 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
LINC00668-204ENST00000580197 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.44
LINC00668-204ENST00000580197 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
LINC00668-204ENST00000580197 WRNQ14191 1432 aaPredicted RBP eCLIP17.8■□□□□ 0.44
LINC00668-204ENST00000580197 FBLN2P98095 1184 aa17.76■□□□□ 0.43
LINC00668-204ENST00000580197 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
LINC00668-204ENST00000580197 PCGF6Q9BYE7 350 aa17.74■□□□□ 0.43
LINC00668-204ENST00000580197 SYNJ1O43426 1573 aa17.74■□□□□ 0.43
LINC00668-204ENST00000580197 TARBP1Q13395 1621 aaKnown RBP17.72■□□□□ 0.43
LINC00668-204ENST00000580197 ANP32EQ9BTT0 268 aa17.71■□□□□ 0.43
LINC00668-204ENST00000580197 EIF4G3O43432 1585 aaKnown RBP17.68■□□□□ 0.42
LINC00668-204ENST00000580197 GTF3C3Q9Y5Q9 886 aa17.67■□□□□ 0.42
LINC00668-204ENST00000580197 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
LINC00668-204ENST00000580197 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
LINC00668-204ENST00000580197 BIVM-ERCC5R4GMW8 1640 aa17.6■□□□□ 0.41
LINC00668-204ENST00000580197 NEUROD1Q13562 356 aa17.59■□□□□ 0.41
LINC00668-204ENST00000580197 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.41
LINC00668-204ENST00000580197 GAPVD1Q14C86 1478 aa17.58■□□□□ 0.4
LINC00668-204ENST00000580197 TRIM41Q8WV44 630 aa17.58■□□□□ 0.4
LINC00668-204ENST00000580197 ABCA10Q8WWZ4 1543 aa17.56■□□□□ 0.4
LINC00668-204ENST00000580197 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
LINC00668-204ENST00000580197 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
LINC00668-204ENST00000580197 WDR97A6NE52 1622 aa17.51■□□□□ 0.39
LINC00668-204ENST00000580197 EIF5BO60841 1220 aaKnown RBP17.47■□□□□ 0.39
LINC00668-204ENST00000580197 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.39
LINC00668-204ENST00000580197 CHD1O14646 1710 aa17.45■□□□□ 0.38
LINC00668-204ENST00000580197 PBRM1Q86U86 1689 aa17.44■□□□□ 0.38
LINC00668-204ENST00000580197 MAGI1Q96QZ7 1491 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms