RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 NISCHQ9Y2I1 1504 aa15.03■□□□□ -0
RTTN-204ENST00000579986 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
RTTN-204ENST00000579986 ZCCHC6Q5VYS8 1495 aaKnown RBP12.64□□□□□ -0.39
RTTN-204ENST00000579986 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
RTTN-204ENST00000579986 MYO15BQ96JP2 1530 aa12.48□□□□□ -0.41
RTTN-204ENST00000579986 ABCC9O60706 1549 aa12.33□□□□□ -0.44
RTTN-204ENST00000579986 NACADO15069 1562 aa12.31□□□□□ -0.44
RTTN-204ENST00000579986 RB1CC1Q8TDY2 1594 aa12.18□□□□□ -0.46
RTTN-204ENST00000579986 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
RTTN-204ENST00000579986 UNC13AQ9UPW8 1703 aa11.99□□□□□ -0.49
RTTN-204ENST00000579986 SCRIBQ14160 1630 aa11.98□□□□□ -0.49
RTTN-204ENST00000579986 SHROOM4Q9ULL8 1493 aa11.88□□□□□ -0.51
RTTN-204ENST00000579986 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
RTTN-204ENST00000579986 BAZ1AQ9NRL2 1556 aaPredicted RBP11.61□□□□□ -0.55
RTTN-204ENST00000579986 CECR2Q9BXF3 1484 aa11.61□□□□□ -0.55
RTTN-204ENST00000579986 RSF1Q96T23 1441 aaPredicted RBP11.58□□□□□ -0.56
RTTN-204ENST00000579986 SMARCA4P51532 1647 aa11.58□□□□□ -0.56
RTTN-204ENST00000579986 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
RTTN-204ENST00000579986 PEG3Q9GZU2 1588 aa11.56□□□□□ -0.56
RTTN-204ENST00000579986 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
RTTN-204ENST00000579986 WIZO95785 1651 aa11.46□□□□□ -0.57
RTTN-204ENST00000579986 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
RTTN-204ENST00000579986 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.58
RTTN-204ENST00000579986 SMARCA2P51531 1590 aa11.4□□□□□ -0.59
RTTN-204ENST00000579986 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
RTTN-204ENST00000579986 HMGXB3Q12766 1538 aa11.36□□□□□ -0.59
RTTN-204ENST00000579986 SUPT5HO00267 1087 aaKnown RBP11.35□□□□□ -0.59
RTTN-204ENST00000579986 NCAPD3P42695 1498 aa11.34□□□□□ -0.59
RTTN-204ENST00000579986 CC2D2AQ9P2K1 1620 aa11.29□□□□□ -0.6
RTTN-204ENST00000579986 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
RTTN-204ENST00000579986 CCDC88BA6NC98 1476 aa11.22□□□□□ -0.61
RTTN-204ENST00000579986 PRDM2Q13029 1718 aa11.09□□□□□ -0.63
RTTN-204ENST00000579986 CFTRP13569 1480 aa11.05□□□□□ -0.64
RTTN-204ENST00000579986 CHIC1Q5VXU3 224 aa10.99□□□□□ -0.65
RTTN-204ENST00000579986 LAMC3Q9Y6N6 1575 aa10.97□□□□□ -0.65
RTTN-204ENST00000579986 CADPSQ9ULU8 1353 aa10.97□□□□□ -0.65
RTTN-204ENST00000579986 DNAJC5BQ9UF47 199 aa10.95□□□□□ -0.66
RTTN-204ENST00000579986 BIVM-ERCC5R4GMW8 1640 aa10.92□□□□□ -0.66
RTTN-204ENST00000579986 ABCC8Q09428 1581 aa10.9□□□□□ -0.67
RTTN-204ENST00000579986 TOP2BQ02880 1626 aa10.89□□□□□ -0.67
RTTN-204ENST00000579986 SYNJ1O43426 1573 aa10.88□□□□□ -0.67
RTTN-204ENST00000579986 WRNQ14191 1432 aaPredicted RBP eCLIP10.86□□□□□ -0.67
RTTN-204ENST00000579986 NESP48681 1621 aa10.84□□□□□ -0.67
RTTN-204ENST00000579986 CUX1P39880 1505 aa10.84□□□□□ -0.67
RTTN-204ENST00000579986 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
RTTN-204ENST00000579986 KIF21AQ7Z4S6 1674 aa10.81□□□□□ -0.68
RTTN-204ENST00000579986 PDS5BQ9NTI5 1447 aa10.79□□□□□ -0.68
RTTN-204ENST00000579986 DNMBPQ6XZF7 1577 aa10.79□□□□□ -0.68
RTTN-204ENST00000579986 CEP164Q9UPV0 1460 aa10.77□□□□□ -0.69
RTTN-204ENST00000579986 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
RTTN-204ENST00000579986 URB2Q14146 1524 aaKnown RBP10.74□□□□□ -0.69
RTTN-204ENST00000579986 TOPBP1Q92547 1522 aa10.74□□□□□ -0.69
RTTN-204ENST00000579986 EEA1Q15075 1411 aa10.73□□□□□ -0.69
RTTN-204ENST00000579986 WDR97A6NE52 1622 aa10.72□□□□□ -0.69
RTTN-204ENST00000579986 WDR62O43379 1518 aa10.72□□□□□ -0.69
RTTN-204ENST00000579986 THOC2Q8NI27 1593 aaKnown RBP10.71□□□□□ -0.69
RTTN-204ENST00000579986 MRC2Q9UBG0 1479 aa10.7□□□□□ -0.7
RTTN-204ENST00000579986 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
RTTN-204ENST00000579986 POLA1P09884 1462 aaPredicted RBP10.67□□□□□ -0.7
RTTN-204ENST00000579986 SOGA1O94964 1423 aa10.66□□□□□ -0.7
RTTN-204ENST00000579986 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
RTTN-204ENST00000579986 ABCA10Q8WWZ4 1543 aa10.66□□□□□ -0.7
RTTN-204ENST00000579986 RUSC2Q8N2Y8 1516 aa10.64□□□□□ -0.71
RTTN-204ENST00000579986 KIF21BO75037 1637 aa10.64□□□□□ -0.71
RTTN-204ENST00000579986 ABCA5Q8WWZ7 1642 aa10.62□□□□□ -0.71
RTTN-204ENST00000579986 CUX2O14529 1486 aa10.61□□□□□ -0.71
RTTN-204ENST00000579986 KIF27Q86VH2 1401 aa10.59□□□□□ -0.71
RTTN-204ENST00000579986 ERICH3Q5RHP9 1530 aa10.58□□□□□ -0.72
RTTN-204ENST00000579986 PRXQ9BXM0 1461 aa10.58□□□□□ -0.72
RTTN-204ENST00000579986 RAD54L2Q9Y4B4 1467 aa10.57□□□□□ -0.72
RTTN-204ENST00000579986 ERCC6Q03468 1493 aa10.56□□□□□ -0.72
RTTN-204ENST00000579986 IFT140Q96RY7 1462 aa10.56□□□□□ -0.72
RTTN-204ENST00000579986 CUL7Q14999 1698 aa10.54□□□□□ -0.72
RTTN-204ENST00000579986 CSRNP3Q8WYN3 585 aa10.54□□□□□ -0.72
RTTN-204ENST00000579986 IGF1RP08069 1367 aa10.53□□□□□ -0.72
RTTN-204ENST00000579986 PBRM1Q86U86 1689 aa10.52□□□□□ -0.73
RTTN-204ENST00000579986 GOLGA3Q08378 1498 aa10.51□□□□□ -0.73
RTTN-204ENST00000579986 GAPVD1Q14C86 1478 aa10.48□□□□□ -0.73
RTTN-204ENST00000579986 TNIKQ9UKE5 1360 aa10.48□□□□□ -0.73
RTTN-204ENST00000579986 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
RTTN-204ENST00000579986 RAPGEF2Q9Y4G8 1499 aa10.47□□□□□ -0.73
RTTN-204ENST00000579986 ADAMTS12P58397 1594 aa10.46□□□□□ -0.74
RTTN-204ENST00000579986 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
RTTN-204ENST00000579986 ZNF608Q9ULD9 1512 aaPredicted RBP10.44□□□□□ -0.74
RTTN-204ENST00000579986 GRIN2BQ13224 1484 aa10.44□□□□□ -0.74
RTTN-204ENST00000579986 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
RTTN-204ENST00000579986 AEBP2Q6ZN18 517 aaPredicted RBP10.42□□□□□ -0.74
RTTN-204ENST00000579986 CARMIL1Q5VZK9 1371 aa10.42□□□□□ -0.74
RTTN-204ENST00000579986 TDRD9Q8NDG6 1382 aaKnown RBP10.42□□□□□ -0.74
RTTN-204ENST00000579986 AQRO60306 1485 aaKnown RBP eCLIP10.4□□□□□ -0.74
RTTN-204ENST00000579986 CTTNBP2Q8WZ74 1663 aa10.4□□□□□ -0.74
RTTN-204ENST00000579986 MAGI1Q96QZ7 1491 aaPredicted RBP10.4□□□□□ -0.74
RTTN-204ENST00000579986 FHAD1B1AJZ9 1412 aa10.4□□□□□ -0.74
RTTN-204ENST00000579986 CEP162Q5TB80 1403 aa10.37□□□□□ -0.75
RTTN-204ENST00000579986 SNAPC4Q5SXM2 1469 aa10.35□□□□□ -0.75
RTTN-204ENST00000579986 SYNJ2O15056 1496 aa10.34□□□□□ -0.75
RTTN-204ENST00000579986 SAMD9Q5K651 1589 aa10.32□□□□□ -0.76
RTTN-204ENST00000579986 GRIN2AQ12879 1464 aa10.32□□□□□ -0.76
RTTN-204ENST00000579986 EFCAB5A4FU69 1503 aa10.31□□□□□ -0.76
RTTN-204ENST00000579986 NUP160Q12769 1436 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms