RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
CCDC178-209ENST00000579947 ABCC9O60706 1549 aa16.21■□□□□ 0.19
CCDC178-209ENST00000579947 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
CCDC178-209ENST00000579947 DNAJC5Q9H3Z4 198 aa15.53■□□□□ 0.08
CCDC178-209ENST00000579947 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
CCDC178-209ENST00000579947 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
CCDC178-209ENST00000579947 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC178-209ENST00000579947 UNC13AQ9UPW8 1703 aa14.79□□□□□ -0.04
CCDC178-209ENST00000579947 NACADO15069 1562 aa14.79□□□□□ -0.04
CCDC178-209ENST00000579947 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
CCDC178-209ENST00000579947 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
CCDC178-209ENST00000579947 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
CCDC178-209ENST00000579947 CUX2O14529 1486 aa14.51□□□□□ -0.09
CCDC178-209ENST00000579947 SHROOM4Q9ULL8 1493 aa14.51□□□□□ -0.09
CCDC178-209ENST00000579947 EIF4G1Q04637 1599 aaKnown RBP14.41□□□□□ -0.1
CCDC178-209ENST00000579947 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
CCDC178-209ENST00000579947 MYO15BQ96JP2 1530 aa14.31□□□□□ -0.12
CCDC178-209ENST00000579947 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
CCDC178-209ENST00000579947 ERCC6Q03468 1493 aa14.08□□□□□ -0.16
CCDC178-209ENST00000579947 SCRIBQ14160 1630 aa13.88□□□□□ -0.19
CCDC178-209ENST00000579947 THOC2Q8NI27 1593 aaKnown RBP13.84□□□□□ -0.19
CCDC178-209ENST00000579947 AEBP2Q6ZN18 517 aaPredicted RBP13.76□□□□□ -0.21
CCDC178-209ENST00000579947 DCAF1Q9Y4B6 1507 aa13.75□□□□□ -0.21
CCDC178-209ENST00000579947 NESP48681 1621 aa13.65□□□□□ -0.22
CCDC178-209ENST00000579947 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.23
CCDC178-209ENST00000579947 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
CCDC178-209ENST00000579947 RIMBP3CA6NJZ7 1639 aa13.58□□□□□ -0.23
CCDC178-209ENST00000579947 RIMBP3BA6NNM3 1639 aa13.58□□□□□ -0.23
CCDC178-209ENST00000579947 RIMBP3Q9UFD9 1639 aa13.58□□□□□ -0.23
CCDC178-209ENST00000579947 ZCCHC6Q5VYS8 1495 aaKnown RBP13.57□□□□□ -0.24
CCDC178-209ENST00000579947 SMARCA2P51531 1590 aa13.55□□□□□ -0.24
CCDC178-209ENST00000579947 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
CCDC178-209ENST00000579947 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
CCDC178-209ENST00000579947 LAMC3Q9Y6N6 1575 aa13.51□□□□□ -0.25
CCDC178-209ENST00000579947 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
CCDC178-209ENST00000579947 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
CCDC178-209ENST00000579947 WDR62O43379 1518 aa13.42□□□□□ -0.26
CCDC178-209ENST00000579947 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
CCDC178-209ENST00000579947 ILDR1Q86SU0 546 aaPredicted RBP13.4□□□□□ -0.26
CCDC178-209ENST00000579947 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
CCDC178-209ENST00000579947 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
CCDC178-209ENST00000579947 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
CCDC178-209ENST00000579947 CYB5RLQ6IPT4 315 aa13.22□□□□□ -0.29
CCDC178-209ENST00000579947 BAZ1BQ9UIG0 1483 aaKnown RBP13.21□□□□□ -0.29
CCDC178-209ENST00000579947 ARAP1Q96P48 1450 aa13.21□□□□□ -0.3
CCDC178-209ENST00000579947 SMARCA4P51532 1647 aa13.19□□□□□ -0.3
CCDC178-209ENST00000579947 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
CCDC178-209ENST00000579947 CADPSQ9ULU8 1353 aa13.11□□□□□ -0.31
CCDC178-209ENST00000579947 CEP164Q9UPV0 1460 aa13.09□□□□□ -0.31
CCDC178-209ENST00000579947 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
CCDC178-209ENST00000579947 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
CCDC178-209ENST00000579947 CHD1O14646 1710 aa12.96□□□□□ -0.34
CCDC178-209ENST00000579947 URB2Q14146 1524 aaKnown RBP12.95□□□□□ -0.34
CCDC178-209ENST00000579947 ZNF608Q9ULD9 1512 aaPredicted RBP12.91□□□□□ -0.34
CCDC178-209ENST00000579947 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
CCDC178-209ENST00000579947 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
CCDC178-209ENST00000579947 ERCC6L2Q5T890 1561 aa12.84□□□□□ -0.35
CCDC178-209ENST00000579947 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
CCDC178-209ENST00000579947 KDM4FA0A1W2PPD8 638 aa12.81□□□□□ -0.36
CCDC178-209ENST00000579947 CFTRP13569 1480 aa12.79□□□□□ -0.36
CCDC178-209ENST00000579947 FBXO41Q8TF61 875 aa12.75□□□□□ -0.37
CCDC178-209ENST00000579947 MROH2BQ7Z745 1585 aa12.74□□□□□ -0.37
CCDC178-209ENST00000579947 KIF13AQ9H1H9 1805 aa12.72□□□□□ -0.37
CCDC178-209ENST00000579947 LMTK3Q96Q04 1460 aa12.7□□□□□ -0.38
CCDC178-209ENST00000579947 PRDM2Q13029 1718 aa12.69□□□□□ -0.38
CCDC178-209ENST00000579947 HECW2Q9P2P5 1572 aa12.69□□□□□ -0.38
CCDC178-209ENST00000579947 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
CCDC178-209ENST00000579947 GAPVD1Q14C86 1478 aa12.68□□□□□ -0.38
CCDC178-209ENST00000579947 SOCS7O14512 581 aa12.65□□□□□ -0.39
CCDC178-209ENST00000579947 TARBP1Q13395 1621 aaKnown RBP12.64□□□□□ -0.39
CCDC178-209ENST00000579947 FBLN2P98095 1184 aa12.64□□□□□ -0.39
CCDC178-209ENST00000579947 TOPBP1Q92547 1522 aa12.64□□□□□ -0.39
CCDC178-209ENST00000579947 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC178-209ENST00000579947 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
CCDC178-209ENST00000579947 KDM6BO15054 1643 aa12.57□□□□□ -0.4
CCDC178-209ENST00000579947 WIZO95785 1651 aa12.55□□□□□ -0.4
CCDC178-209ENST00000579947 DNMBPQ6XZF7 1577 aa12.54□□□□□ -0.4
CCDC178-209ENST00000579947 WDR97A6NE52 1622 aa12.53□□□□□ -0.4
CCDC178-209ENST00000579947 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
CCDC178-209ENST00000579947 ADGRL1O94910 1474 aa12.52□□□□□ -0.4
CCDC178-209ENST00000579947 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
CCDC178-209ENST00000579947 ILDR2Q71H61 639 aa12.49□□□□□ -0.41
CCDC178-209ENST00000579947 SYNJ2O15056 1496 aa12.49□□□□□ -0.41
CCDC178-209ENST00000579947 ABCC10Q5T3U5 1492 aa12.48□□□□□ -0.41
CCDC178-209ENST00000579947 CHMP7Q8WUX9 453 aaPredicted RBP12.45□□□□□ -0.42
CCDC178-209ENST00000579947 DIP2BQ9P265 1576 aa12.44□□□□□ -0.42
CCDC178-209ENST00000579947 POLA1P09884 1462 aaPredicted RBP12.42□□□□□ -0.42
CCDC178-209ENST00000579947 MAPKBP1O60336 1514 aa12.4□□□□□ -0.42
CCDC178-209ENST00000579947 FAM69CQ0P6D2 419 aa12.39□□□□□ -0.43
CCDC178-209ENST00000579947 DISP3Q9P2K9 1392 aa12.38□□□□□ -0.43
CCDC178-209ENST00000579947 TOP2AP11388 1531 aaKnown RBP12.38□□□□□ -0.43
CCDC178-209ENST00000579947 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
CCDC178-209ENST00000579947 TDRD9Q8NDG6 1382 aaKnown RBP12.37□□□□□ -0.43
CCDC178-209ENST00000579947 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
CCDC178-209ENST00000579947 SHROOM2Q13796 1616 aa12.36□□□□□ -0.43
CCDC178-209ENST00000579947 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
CCDC178-209ENST00000579947 SOGA1O94964 1423 aa12.32□□□□□ -0.44
CCDC178-209ENST00000579947 PBRM1Q86U86 1689 aa12.32□□□□□ -0.44
CCDC178-209ENST00000579947 TSPOAP1O95153 1857 aa12.31□□□□□ -0.44
CCDC178-209ENST00000579947 SPATA31D1Q6ZQQ2 1576 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms