RNA–Protein interactions for RNA: ENST00000579632.5

CDK5RAP3-214, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-214ENST00000579632 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
CDK5RAP3-214ENST00000579632 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
CDK5RAP3-214ENST00000579632 ABCC9O60706 1549 aa20.7■□□□□ 0.9
CDK5RAP3-214ENST00000579632 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
CDK5RAP3-214ENST00000579632 DCAF8L2P0C7V8 631 aa20.41■□□□□ 0.86
CDK5RAP3-214ENST00000579632 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
CDK5RAP3-214ENST00000579632 MYO15BQ96JP2 1530 aa20.3■□□□□ 0.84
CDK5RAP3-214ENST00000579632 NACADO15069 1562 aa20.22■□□□□ 0.83
CDK5RAP3-214ENST00000579632 RB1CC1Q8TDY2 1594 aa20.1■□□□□ 0.81
CDK5RAP3-214ENST00000579632 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
CDK5RAP3-214ENST00000579632 SHROOM4Q9ULL8 1493 aa19.69■□□□□ 0.74
CDK5RAP3-214ENST00000579632 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDK5RAP3-214ENST00000579632 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
CDK5RAP3-214ENST00000579632 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
CDK5RAP3-214ENST00000579632 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
CDK5RAP3-214ENST00000579632 BAZ1AQ9NRL2 1556 aaPredicted RBP19■□□□□ 0.63
CDK5RAP3-214ENST00000579632 RSF1Q96T23 1441 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-214ENST00000579632 EIF4G1Q04637 1599 aaKnown RBP18.91■□□□□ 0.62
CDK5RAP3-214ENST00000579632 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
CDK5RAP3-214ENST00000579632 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
CDK5RAP3-214ENST00000579632 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
CDK5RAP3-214ENST00000579632 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
CDK5RAP3-214ENST00000579632 SMARCA2P51531 1590 aa18.74■□□□□ 0.59
CDK5RAP3-214ENST00000579632 PEG3Q9GZU2 1588 aa18.74■□□□□ 0.59
CDK5RAP3-214ENST00000579632 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
CDK5RAP3-214ENST00000579632 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
CDK5RAP3-214ENST00000579632 WIZO95785 1651 aa18.65■□□□□ 0.58
CDK5RAP3-214ENST00000579632 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
CDK5RAP3-214ENST00000579632 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-214ENST00000579632 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
CDK5RAP3-214ENST00000579632 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
CDK5RAP3-214ENST00000579632 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
CDK5RAP3-214ENST00000579632 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
CDK5RAP3-214ENST00000579632 CFTRP13569 1480 aa18.16■□□□□ 0.5
CDK5RAP3-214ENST00000579632 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
CDK5RAP3-214ENST00000579632 NESP48681 1621 aa18.02■□□□□ 0.48
CDK5RAP3-214ENST00000579632 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
CDK5RAP3-214ENST00000579632 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
CDK5RAP3-214ENST00000579632 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
CDK5RAP3-214ENST00000579632 ERCC6Q03468 1493 aa17.85■□□□□ 0.45
CDK5RAP3-214ENST00000579632 WRNQ14191 1432 aaPredicted RBP eCLIP17.84■□□□□ 0.45
CDK5RAP3-214ENST00000579632 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
CDK5RAP3-214ENST00000579632 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
CDK5RAP3-214ENST00000579632 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
CDK5RAP3-214ENST00000579632 ABCC8Q09428 1581 aa17.77■□□□□ 0.44
CDK5RAP3-214ENST00000579632 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
CDK5RAP3-214ENST00000579632 CUX1P39880 1505 aa17.71■□□□□ 0.43
CDK5RAP3-214ENST00000579632 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
CDK5RAP3-214ENST00000579632 KIF21AQ7Z4S6 1674 aa17.7■□□□□ 0.42
CDK5RAP3-214ENST00000579632 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
CDK5RAP3-214ENST00000579632 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
CDK5RAP3-214ENST00000579632 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
CDK5RAP3-214ENST00000579632 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
CDK5RAP3-214ENST00000579632 WDR62O43379 1518 aa17.64■□□□□ 0.41
CDK5RAP3-214ENST00000579632 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
CDK5RAP3-214ENST00000579632 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-214ENST00000579632 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
CDK5RAP3-214ENST00000579632 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-214ENST00000579632 SOGA1O94964 1423 aa17.56■□□□□ 0.4
CDK5RAP3-214ENST00000579632 CUX2O14529 1486 aa17.5■□□□□ 0.39
CDK5RAP3-214ENST00000579632 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
CDK5RAP3-214ENST00000579632 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
CDK5RAP3-214ENST00000579632 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
CDK5RAP3-214ENST00000579632 KIF27Q86VH2 1401 aa17.45■□□□□ 0.38
CDK5RAP3-214ENST00000579632 EEA1Q15075 1411 aa17.44■□□□□ 0.38
CDK5RAP3-214ENST00000579632 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
CDK5RAP3-214ENST00000579632 TARBP1Q13395 1621 aaKnown RBP17.39■□□□□ 0.38
CDK5RAP3-214ENST00000579632 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
CDK5RAP3-214ENST00000579632 FAM9AQ8IZU1 332 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-214ENST00000579632 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
CDK5RAP3-214ENST00000579632 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
CDK5RAP3-214ENST00000579632 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
CDK5RAP3-214ENST00000579632 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.37
CDK5RAP3-214ENST00000579632 AQRO60306 1485 aaKnown RBP eCLIP17.33■□□□□ 0.372e-7■■■■□ 24.7
CDK5RAP3-214ENST00000579632 IGF1RP08069 1367 aa17.33■□□□□ 0.36
CDK5RAP3-214ENST00000579632 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
CDK5RAP3-214ENST00000579632 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
CDK5RAP3-214ENST00000579632 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
CDK5RAP3-214ENST00000579632 CARMIL1Q5VZK9 1371 aa17.24■□□□□ 0.35
CDK5RAP3-214ENST00000579632 EIF4G3O43432 1585 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-214ENST00000579632 PRXQ9BXM0 1461 aa17.21■□□□□ 0.35
CDK5RAP3-214ENST00000579632 FHAD1B1AJZ9 1412 aa17.19■□□□□ 0.34
CDK5RAP3-214ENST00000579632 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-214ENST00000579632 SNAPC4Q5SXM2 1469 aa17.16■□□□□ 0.34
CDK5RAP3-214ENST00000579632 RAPGEF2Q9Y4G8 1499 aa17.15■□□□□ 0.34
CDK5RAP3-214ENST00000579632 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-214ENST00000579632 CUL7Q14999 1698 aa17.12■□□□□ 0.33
CDK5RAP3-214ENST00000579632 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
CDK5RAP3-214ENST00000579632 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
CDK5RAP3-214ENST00000579632 LOC105371045A0A1W2PR82 267 aa17.1■□□□□ 0.33
CDK5RAP3-214ENST00000579632 KIF21BO75037 1637 aa17.1■□□□□ 0.33
CDK5RAP3-214ENST00000579632 PBRM1Q86U86 1689 aa17.09■□□□□ 0.33
CDK5RAP3-214ENST00000579632 ADAMTS12P58397 1594 aa17.08■□□□□ 0.32
CDK5RAP3-214ENST00000579632 UBTFP17480 764 aaKnown RBP17.08■□□□□ 0.32
CDK5RAP3-214ENST00000579632 FBLN2P98095 1184 aa17.08■□□□□ 0.32
CDK5RAP3-214ENST00000579632 EHMT2Q96KQ7 1210 aa17.07■□□□□ 0.32
CDK5RAP3-214ENST00000579632 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
CDK5RAP3-214ENST00000579632 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
CDK5RAP3-214ENST00000579632 NUP160Q12769 1436 aa16.96■□□□□ 0.31
CDK5RAP3-214ENST00000579632 KIAA0586Q9BVV6 1533 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms