RNA–Protein interactions for RNA: ENST00000579563.1

PHF12-208, Transcript of PHD finger protein 12, humanhuman

TSL 4

Gene PHF12, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-208ENST00000579563 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
PHF12-208ENST00000579563 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.9
PHF12-208ENST00000579563 ABCC9O60706 1549 aa19.81■□□□□ 0.76
PHF12-208ENST00000579563 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
PHF12-208ENST00000579563 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
PHF12-208ENST00000579563 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
PHF12-208ENST00000579563 MYO15BQ96JP2 1530 aa19.39■□□□□ 0.69
PHF12-208ENST00000579563 NACADO15069 1562 aa19.36■□□□□ 0.69
PHF12-208ENST00000579563 RB1CC1Q8TDY2 1594 aa19.27■□□□□ 0.68
PHF12-208ENST00000579563 SHROOM4Q9ULL8 1493 aa19.05■□□□□ 0.64
PHF12-208ENST00000579563 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
PHF12-208ENST00000579563 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
PHF12-208ENST00000579563 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
PHF12-208ENST00000579563 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
PHF12-208ENST00000579563 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
PHF12-208ENST00000579563 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
PHF12-208ENST00000579563 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
PHF12-208ENST00000579563 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
PHF12-208ENST00000579563 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
PHF12-208ENST00000579563 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
PHF12-208ENST00000579563 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
PHF12-208ENST00000579563 SMARCA2P51531 1590 aa17.99■□□□□ 0.47
PHF12-208ENST00000579563 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
PHF12-208ENST00000579563 WIZO95785 1651 aa17.93■□□□□ 0.46
PHF12-208ENST00000579563 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
PHF12-208ENST00000579563 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
PHF12-208ENST00000579563 NCAPD3P42695 1498 aa17.87■□□□□ 0.45
PHF12-208ENST00000579563 CC2D2AQ9P2K1 1620 aa17.86■□□□□ 0.45
PHF12-208ENST00000579563 TOP2AP11388 1531 aaKnown RBP17.84■□□□□ 0.45
PHF12-208ENST00000579563 HMGXB3Q12766 1538 aa17.78■□□□□ 0.44
PHF12-208ENST00000579563 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
PHF12-208ENST00000579563 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
PHF12-208ENST00000579563 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
PHF12-208ENST00000579563 CFTRP13569 1480 aa17.37■□□□□ 0.37
PHF12-208ENST00000579563 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
PHF12-208ENST00000579563 LAMC3Q9Y6N6 1575 aa17.3■□□□□ 0.36
PHF12-208ENST00000579563 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
PHF12-208ENST00000579563 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
PHF12-208ENST00000579563 NESP48681 1621 aa17.22■□□□□ 0.35
PHF12-208ENST00000579563 FANCD2Q9BXW9 1451 aa17.2■□□□□ 0.34
PHF12-208ENST00000579563 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.349e-6■■■■■ 50.1
PHF12-208ENST00000579563 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
PHF12-208ENST00000579563 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
PHF12-208ENST00000579563 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
PHF12-208ENST00000579563 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
PHF12-208ENST00000579563 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
PHF12-208ENST00000579563 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
PHF12-208ENST00000579563 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
PHF12-208ENST00000579563 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
PHF12-208ENST00000579563 CUX1P39880 1505 aa16.97■□□□□ 0.31
PHF12-208ENST00000579563 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
PHF12-208ENST00000579563 TOPBP1Q92547 1522 aa16.95■□□□□ 0.3
PHF12-208ENST00000579563 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
PHF12-208ENST00000579563 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
PHF12-208ENST00000579563 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
PHF12-208ENST00000579563 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
PHF12-208ENST00000579563 SOGA1O94964 1423 aa16.87■□□□□ 0.29
PHF12-208ENST00000579563 EEA1Q15075 1411 aa16.87■□□□□ 0.29
PHF12-208ENST00000579563 WDR62O43379 1518 aa16.85■□□□□ 0.29
PHF12-208ENST00000579563 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
PHF12-208ENST00000579563 KIF27Q86VH2 1401 aa16.83■□□□□ 0.28
PHF12-208ENST00000579563 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
PHF12-208ENST00000579563 CUX2O14529 1486 aa16.79■□□□□ 0.28
PHF12-208ENST00000579563 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
PHF12-208ENST00000579563 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
PHF12-208ENST00000579563 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.28
PHF12-208ENST00000579563 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
PHF12-208ENST00000579563 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
PHF12-208ENST00000579563 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
PHF12-208ENST00000579563 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
PHF12-208ENST00000579563 GAPVD1Q14C86 1478 aa16.65■□□□□ 0.26
PHF12-208ENST00000579563 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
PHF12-208ENST00000579563 UBTFP17480 764 aaKnown RBP16.63■□□□□ 0.25
PHF12-208ENST00000579563 IGF1RP08069 1367 aa16.63■□□□□ 0.25
PHF12-208ENST00000579563 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
PHF12-208ENST00000579563 LOC105371045A0A1W2PR82 267 aa16.61■□□□□ 0.25
PHF12-208ENST00000579563 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.25
PHF12-208ENST00000579563 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
PHF12-208ENST00000579563 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
PHF12-208ENST00000579563 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
PHF12-208ENST00000579563 ERICH3Q5RHP9 1530 aa16.56■□□□□ 0.24
PHF12-208ENST00000579563 ZNF608Q9ULD9 1512 aaPredicted RBP16.56■□□□□ 0.24
PHF12-208ENST00000579563 ABCA5Q8WWZ7 1642 aa16.55■□□□□ 0.24
PHF12-208ENST00000579563 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
PHF12-208ENST00000579563 RAPGEF2Q9Y4G8 1499 aa16.53■□□□□ 0.24
PHF12-208ENST00000579563 KIF21BO75037 1637 aa16.52■□□□□ 0.23
PHF12-208ENST00000579563 CUL7Q14999 1698 aa16.5■□□□□ 0.23
PHF12-208ENST00000579563 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
PHF12-208ENST00000579563 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
PHF12-208ENST00000579563 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
PHF12-208ENST00000579563 FBLN2P98095 1184 aa16.48■□□□□ 0.23
PHF12-208ENST00000579563 TNIKQ9UKE5 1360 aa16.47■□□□□ 0.23
PHF12-208ENST00000579563 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
PHF12-208ENST00000579563 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
PHF12-208ENST00000579563 PBRM1Q86U86 1689 aa16.45■□□□□ 0.22
PHF12-208ENST00000579563 SYNJ2O15056 1496 aa16.4■□□□□ 0.22
PHF12-208ENST00000579563 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
PHF12-208ENST00000579563 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
PHF12-208ENST00000579563 GRIN2AQ12879 1464 aa16.33■□□□□ 0.2
PHF12-208ENST00000579563 CEP162Q5TB80 1403 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms