RNA–Protein interactions for RNA: ENST00000579022.5

SMIM21-202, Transcript of small integral membrane protein 21, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMIM21, Length 1,834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM21-202ENST00000579022 NISCHQ9Y2I1 1504 aa27.24■■□□□ 1.95
SMIM21-202ENST00000579022 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
SMIM21-202ENST00000579022 ZCCHC6Q5VYS8 1495 aaKnown RBP23.01■■□□□ 1.27
SMIM21-202ENST00000579022 DCAF1Q9Y4B6 1507 aa22.63■■□□□ 1.21
SMIM21-202ENST00000579022 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
SMIM21-202ENST00000579022 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
SMIM21-202ENST00000579022 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
SMIM21-202ENST00000579022 NACADO15069 1562 aa21.87■■□□□ 1.09
SMIM21-202ENST00000579022 ABCC9O60706 1549 aa21.74■■□□□ 1.07
SMIM21-202ENST00000579022 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
SMIM21-202ENST00000579022 SCRIBQ14160 1630 aa21.67■■□□□ 1.06
SMIM21-202ENST00000579022 RB1CC1Q8TDY2 1594 aa21.55■■□□□ 1.04
SMIM21-202ENST00000579022 RSF1Q96T23 1441 aaPredicted RBP21.27■■□□□ 1
SMIM21-202ENST00000579022 UNC13AQ9UPW8 1703 aa21.17■□□□□ 0.98
SMIM21-202ENST00000579022 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
SMIM21-202ENST00000579022 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
SMIM21-202ENST00000579022 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
SMIM21-202ENST00000579022 HRCP23327 699 aa21.03■□□□□ 0.96
SMIM21-202ENST00000579022 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
SMIM21-202ENST00000579022 WIZO95785 1651 aa20.89■□□□□ 0.93
SMIM21-202ENST00000579022 BICRAQ9NZM4 1560 aa20.87■□□□□ 0.93
SMIM21-202ENST00000579022 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
SMIM21-202ENST00000579022 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
SMIM21-202ENST00000579022 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
SMIM21-202ENST00000579022 EIF4G1Q04637 1599 aaKnown RBP20.62■□□□□ 0.89
SMIM21-202ENST00000579022 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
SMIM21-202ENST00000579022 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
SMIM21-202ENST00000579022 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
SMIM21-202ENST00000579022 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
SMIM21-202ENST00000579022 TRIM41Q8WV44 630 aa20.45■□□□□ 0.86
SMIM21-202ENST00000579022 PCGF6Q9BYE7 350 aa20.44■□□□□ 0.86
SMIM21-202ENST00000579022 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
SMIM21-202ENST00000579022 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
SMIM21-202ENST00000579022 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
SMIM21-202ENST00000579022 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
SMIM21-202ENST00000579022 ZEB1P37275 1124 aaPredicted RBP20.2■□□□□ 0.82
SMIM21-202ENST00000579022 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
SMIM21-202ENST00000579022 TRIM26Q12899 539 aaPredicted RBP20.16■□□□□ 0.82
SMIM21-202ENST00000579022 NCAPD3P42695 1498 aa20.14■□□□□ 0.81
SMIM21-202ENST00000579022 PPARGC1BQ86YN6 1023 aaKnown RBP20.13■□□□□ 0.81
SMIM21-202ENST00000579022 EEA1Q15075 1411 aa20.05■□□□□ 0.8
SMIM21-202ENST00000579022 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.79
SMIM21-202ENST00000579022 FAM9AQ8IZU1 332 aaPredicted RBP19.98■□□□□ 0.79
SMIM21-202ENST00000579022 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
SMIM21-202ENST00000579022 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
SMIM21-202ENST00000579022 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
SMIM21-202ENST00000579022 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
SMIM21-202ENST00000579022 SOGA1O94964 1423 aa19.85■□□□□ 0.77
SMIM21-202ENST00000579022 MYT1Q01538 1121 aa19.83■□□□□ 0.76
SMIM21-202ENST00000579022 CFTRP13569 1480 aa19.82■□□□□ 0.76
SMIM21-202ENST00000579022 KIF21BO75037 1637 aa19.77■□□□□ 0.76
SMIM21-202ENST00000579022 CC2D2AQ9P2K1 1620 aa19.77■□□□□ 0.75
SMIM21-202ENST00000579022 TNIKQ9UKE5 1360 aa19.75■□□□□ 0.75
SMIM21-202ENST00000579022 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
SMIM21-202ENST00000579022 GOLGA3Q08378 1498 aa19.74■□□□□ 0.75
SMIM21-202ENST00000579022 RUSC2Q8N2Y8 1516 aa19.73■□□□□ 0.75
SMIM21-202ENST00000579022 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
SMIM21-202ENST00000579022 CEP162Q5TB80 1403 aa19.67■□□□□ 0.74
SMIM21-202ENST00000579022 CUX1P39880 1505 aa19.64■□□□□ 0.74
SMIM21-202ENST00000579022 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
SMIM21-202ENST00000579022 EHMT2Q96KQ7 1210 aa19.6■□□□□ 0.73
SMIM21-202ENST00000579022 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
SMIM21-202ENST00000579022 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
SMIM21-202ENST00000579022 PRXQ9BXM0 1461 aa19.49■□□□□ 0.71
SMIM21-202ENST00000579022 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
SMIM21-202ENST00000579022 KIF27Q86VH2 1401 aa19.48■□□□□ 0.71
SMIM21-202ENST00000579022 RAPGEF2Q9Y4G8 1499 aa19.46■□□□□ 0.71
SMIM21-202ENST00000579022 LAMC3Q9Y6N6 1575 aa19.42■□□□□ 0.7
SMIM21-202ENST00000579022 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
SMIM21-202ENST00000579022 CLIP1P30622 1438 aa19.4■□□□□ 0.7
SMIM21-202ENST00000579022 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
SMIM21-202ENST00000579022 ACIN1Q9UKV3 1341 aaKnown RBP19.37■□□□□ 0.69
SMIM21-202ENST00000579022 CENPBP07199 599 aaPredicted RBP19.35■□□□□ 0.69
SMIM21-202ENST00000579022 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
SMIM21-202ENST00000579022 VPS8Q8N3P4 1428 aa19.33■□□□□ 0.69
SMIM21-202ENST00000579022 CUX2O14529 1486 aa19.29■□□□□ 0.68
SMIM21-202ENST00000579022 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
SMIM21-202ENST00000579022 ABCA10Q8WWZ4 1543 aa19.24■□□□□ 0.67
SMIM21-202ENST00000579022 NESP48681 1621 aa19.23■□□□□ 0.67
SMIM21-202ENST00000579022 IGF1RP08069 1367 aa19.21■□□□□ 0.67
SMIM21-202ENST00000579022 POLA1P09884 1462 aaPredicted RBP19.2■□□□□ 0.66
SMIM21-202ENST00000579022 WDR97A6NE52 1622 aa19.19■□□□□ 0.66
SMIM21-202ENST00000579022 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
SMIM21-202ENST00000579022 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
SMIM21-202ENST00000579022 CUL7Q14999 1698 aa19.16■□□□□ 0.66
SMIM21-202ENST00000579022 URB2Q14146 1524 aaKnown RBP19.14■□□□□ 0.65
SMIM21-202ENST00000579022 NEUROD1Q13562 356 aa19.13■□□□□ 0.65
SMIM21-202ENST00000579022 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
SMIM21-202ENST00000579022 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
SMIM21-202ENST00000579022 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
SMIM21-202ENST00000579022 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
SMIM21-202ENST00000579022 ARHGAP35Q9NRY4 1499 aa19.08■□□□□ 0.65
SMIM21-202ENST00000579022 RAD54L2Q9Y4B4 1467 aa19.07■□□□□ 0.64
SMIM21-202ENST00000579022 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
SMIM21-202ENST00000579022 GTF3C3Q9Y5Q9 886 aa19.07■□□□□ 0.64
SMIM21-202ENST00000579022 APLP2Q06481 763 aa19.05■□□□□ 0.64
SMIM21-202ENST00000579022 CTTNBP2Q8WZ74 1663 aa19.01■□□□□ 0.63
SMIM21-202ENST00000579022 MAP3K1Q13233 1512 aa19■□□□□ 0.63
SMIM21-202ENST00000579022 EFCAB5A4FU69 1503 aa18.98■□□□□ 0.63
SMIM21-202ENST00000579022 TARBP1Q13395 1621 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms