RNA–Protein interactions for RNA: ENST00000578914.1

RNF138-205, Transcript of ring finger protein 138, humanhuman

TSL 4

Gene RNF138, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138-205ENST00000578914 NISCHQ9Y2I1 1504 aa35.53■■■■□ 3.28
RNF138-205ENST00000578914 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
RNF138-205ENST00000578914 ABCC9O60706 1549 aa30.55■■■□□ 2.48
RNF138-205ENST00000578914 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
RNF138-205ENST00000578914 NACADO15069 1562 aa29.52■■■□□ 2.32
RNF138-205ENST00000578914 RB1CC1Q8TDY2 1594 aa29.48■■■□□ 2.31
RNF138-205ENST00000578914 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
RNF138-205ENST00000578914 MYO15BQ96JP2 1530 aa29.41■■■□□ 2.3
RNF138-205ENST00000578914 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
RNF138-205ENST00000578914 UNC13AQ9UPW8 1703 aa29.04■■■□□ 2.24
RNF138-205ENST00000578914 SCRIBQ14160 1630 aa28.79■■■□□ 2.2
RNF138-205ENST00000578914 BICRAQ9NZM4 1560 aa28.71■■■□□ 2.19
RNF138-205ENST00000578914 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
RNF138-205ENST00000578914 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
RNF138-205ENST00000578914 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
RNF138-205ENST00000578914 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
RNF138-205ENST00000578914 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.02
RNF138-205ENST00000578914 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.02
RNF138-205ENST00000578914 SMARCA4P51532 1647 aa27.56■■■□□ 2
RNF138-205ENST00000578914 BAZ1AQ9NRL2 1556 aaPredicted RBP27.5■■□□□ 1.99
RNF138-205ENST00000578914 MROH2BQ7Z745 1585 aa27.43■■□□□ 1.98
RNF138-205ENST00000578914 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
RNF138-205ENST00000578914 PEG3Q9GZU2 1588 aa27.28■■□□□ 1.96
RNF138-205ENST00000578914 SMARCA2P51531 1590 aa27.25■■□□□ 1.95
RNF138-205ENST00000578914 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
RNF138-205ENST00000578914 WIZO95785 1651 aa27.19■■□□□ 1.94
RNF138-205ENST00000578914 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
RNF138-205ENST00000578914 HMGXB3Q12766 1538 aa27.15■■□□□ 1.94
RNF138-205ENST00000578914 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
RNF138-205ENST00000578914 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
RNF138-205ENST00000578914 NESP48681 1621 aa26.57■■□□□ 1.84
RNF138-205ENST00000578914 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
RNF138-205ENST00000578914 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
RNF138-205ENST00000578914 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
RNF138-205ENST00000578914 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
RNF138-205ENST00000578914 CFTRP13569 1480 aa26.35■■□□□ 1.81
RNF138-205ENST00000578914 KIF21AQ7Z4S6 1674 aa26.32■■□□□ 1.8
RNF138-205ENST00000578914 PRDM2Q13029 1718 aa26.32■■□□□ 1.8
RNF138-205ENST00000578914 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
RNF138-205ENST00000578914 PDS5BQ9NTI5 1447 aa26.21■■□□□ 1.79
RNF138-205ENST00000578914 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
RNF138-205ENST00000578914 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.78
RNF138-205ENST00000578914 CEP164Q9UPV0 1460 aa26.07■■□□□ 1.76
RNF138-205ENST00000578914 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
RNF138-205ENST00000578914 WDR62O43379 1518 aa25.94■■□□□ 1.74
RNF138-205ENST00000578914 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
RNF138-205ENST00000578914 CUX2O14529 1486 aa25.91■■□□□ 1.74
RNF138-205ENST00000578914 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
RNF138-205ENST00000578914 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
RNF138-205ENST00000578914 CUX1P39880 1505 aa25.72■■□□□ 1.71
RNF138-205ENST00000578914 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
RNF138-205ENST00000578914 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
RNF138-205ENST00000578914 BIVM-ERCC5R4GMW8 1640 aa25.59■■□□□ 1.69
RNF138-205ENST00000578914 POLA1P09884 1462 aaPredicted RBP25.58■■□□□ 1.69
RNF138-205ENST00000578914 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
RNF138-205ENST00000578914 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
RNF138-205ENST00000578914 FGD5Q6ZNL6 1462 aa25.55■■□□□ 1.68
RNF138-205ENST00000578914 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
RNF138-205ENST00000578914 IFT140Q96RY7 1462 aa25.5■■□□□ 1.67
RNF138-205ENST00000578914 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
RNF138-205ENST00000578914 WDR97A6NE52 1622 aa25.45■■□□□ 1.66
RNF138-205ENST00000578914 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
RNF138-205ENST00000578914 SOGA1O94964 1423 aa25.41■■□□□ 1.66
RNF138-205ENST00000578914 EIF4G3O43432 1585 aaKnown RBP25.38■■□□□ 1.65
RNF138-205ENST00000578914 ABCA10Q8WWZ4 1543 aa25.31■■□□□ 1.64
RNF138-205ENST00000578914 AQRO60306 1485 aaKnown RBP eCLIP25.29■■□□□ 1.641e-7■■■□□ 17.9
RNF138-205ENST00000578914 TDRD9Q8NDG6 1382 aaKnown RBP25.26■■□□□ 1.63
RNF138-205ENST00000578914 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
RNF138-205ENST00000578914 PBRM1Q86U86 1689 aa25.21■■□□□ 1.63
RNF138-205ENST00000578914 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
RNF138-205ENST00000578914 GRIN2BQ13224 1484 aa25.1■■□□□ 1.61
RNF138-205ENST00000578914 SNAPC4Q5SXM2 1469 aa25.08■■□□□ 1.6
RNF138-205ENST00000578914 CHD1O14646 1710 aa25.06■■□□□ 1.6
RNF138-205ENST00000578914 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
RNF138-205ENST00000578914 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
RNF138-205ENST00000578914 ERICH3Q5RHP9 1530 aa25■■□□□ 1.59
RNF138-205ENST00000578914 ADAMTS12P58397 1594 aa24.98■■□□□ 1.59
RNF138-205ENST00000578914 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
RNF138-205ENST00000578914 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
RNF138-205ENST00000578914 RUSC2Q8N2Y8 1516 aa24.96■■□□□ 1.59
RNF138-205ENST00000578914 SYNJ2O15056 1496 aa24.91■■□□□ 1.58
RNF138-205ENST00000578914 IGF1RP08069 1367 aa24.87■■□□□ 1.57
RNF138-205ENST00000578914 CUL7Q14999 1698 aa24.85■■□□□ 1.57
RNF138-205ENST00000578914 FHAD1B1AJZ9 1412 aa24.85■■□□□ 1.57
RNF138-205ENST00000578914 FBLN2P98095 1184 aa24.82■■□□□ 1.56
RNF138-205ENST00000578914 GRIN2AQ12879 1464 aa24.81■■□□□ 1.56
RNF138-205ENST00000578914 OSCARQ8IYS5 282 aa24.79■■□□□ 1.56
RNF138-205ENST00000578914 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
RNF138-205ENST00000578914 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
RNF138-205ENST00000578914 CEP170Q5SW79 1584 aa24.75■■□□□ 1.55
RNF138-205ENST00000578914 CLASP1Q7Z460 1538 aa24.74■■□□□ 1.55
RNF138-205ENST00000578914 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.55
RNF138-205ENST00000578914 NUP160Q12769 1436 aa24.69■■□□□ 1.54
RNF138-205ENST00000578914 EEA1Q15075 1411 aa24.64■■□□□ 1.54
RNF138-205ENST00000578914 PRXQ9BXM0 1461 aa24.63■■□□□ 1.53
RNF138-205ENST00000578914 RAPGEF2Q9Y4G8 1499 aa24.6■■□□□ 1.53
RNF138-205ENST00000578914 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
RNF138-205ENST00000578914 CSRNP3Q8WYN3 585 aa24.56■■□□□ 1.52
RNF138-205ENST00000578914 SHROOM2Q13796 1616 aa24.55■■□□□ 1.52
RNF138-205ENST00000578914 RIMBP3CA6NJZ7 1639 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms