RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 NISCHQ9Y2I1 1504 aa52.63■■■■■ 6.02
CDC42EP4-203ENST00000578516 CCDC180Q9P1Z9 1646 aa46.73■■■■■ 5.07
CDC42EP4-203ENST00000578516 ABCC9O60706 1549 aa45.6■■■■■ 4.89
CDC42EP4-203ENST00000578516 ZCCHC6Q5VYS8 1495 aaKnown RBP43.93■■■■■ 4.62
CDC42EP4-203ENST00000578516 DCAF8L2P0C7V8 631 aa43.86■■■■■ 4.61
CDC42EP4-203ENST00000578516 RB1CC1Q8TDY2 1594 aa43.82■■■■■ 4.61
CDC42EP4-203ENST00000578516 NACADO15069 1562 aa43.78■■■■■ 4.6
CDC42EP4-203ENST00000578516 MYO15BQ96JP2 1530 aa43.48■■■■■ 4.55
CDC42EP4-203ENST00000578516 DCAF1Q9Y4B6 1507 aa43.44■■■■■ 4.54
CDC42EP4-203ENST00000578516 UNC13AQ9UPW8 1703 aa43.14■■■■■ 4.5
CDC42EP4-203ENST00000578516 SCRIBQ14160 1630 aa42.82■■■■■ 4.44
CDC42EP4-203ENST00000578516 BICRAQ9NZM4 1560 aa42.65■■■■■ 4.42
CDC42EP4-203ENST00000578516 PABPN1Q86U42 306 aaKnown RBP eCLIP42.6■■■■■ 4.41
CDC42EP4-203ENST00000578516 SHROOM4Q9ULL8 1493 aa41.9■■■■■ 4.3
CDC42EP4-203ENST00000578516 DNAJC5BQ9UF47 199 aa41.64■■■■■ 4.26
CDC42EP4-203ENST00000578516 EIF4G1Q04637 1599 aaKnown RBP41.43■■■■■ 4.22
CDC42EP4-203ENST00000578516 CC2D2AQ9P2K1 1620 aa41.26■■■■■ 4.19
CDC42EP4-203ENST00000578516 CECR2Q9BXF3 1484 aa41.09■■■■■ 4.17
CDC42EP4-203ENST00000578516 SMARCA4P51532 1647 aa40.88■■■■■ 4.13
CDC42EP4-203ENST00000578516 BAZ1AQ9NRL2 1556 aaPredicted RBP40.74■■■■■ 4.11
CDC42EP4-203ENST00000578516 MROH2BQ7Z745 1585 aa40.67■■■■■ 4.1
CDC42EP4-203ENST00000578516 ATAD2BQ9ULI0 1458 aa40.51■■■■■ 4.08
CDC42EP4-203ENST00000578516 SMARCA2P51531 1590 aa40.42■■■■■ 4.06
CDC42EP4-203ENST00000578516 PEG3Q9GZU2 1588 aa40.36■■■■■ 4.05
CDC42EP4-203ENST00000578516 NCAPD3P42695 1498 aa40.36■■■■■ 4.05
CDC42EP4-203ENST00000578516 WIZO95785 1651 aa40.32■■■■■ 4.05
CDC42EP4-203ENST00000578516 HMGXB3Q12766 1538 aa40.26■■■■■ 4.03
CDC42EP4-203ENST00000578516 BAZ1BQ9UIG0 1483 aaKnown RBP40.19■■■■■ 4.03
CDC42EP4-203ENST00000578516 RSF1Q96T23 1441 aaPredicted RBP40.18■■■■■ 4.02
CDC42EP4-203ENST00000578516 TOP2AP11388 1531 aaKnown RBP39.77■■■■□ 3.96
CDC42EP4-203ENST00000578516 NESP48681 1621 aa39.58■■■■□ 3.93
CDC42EP4-203ENST00000578516 SUPT5HO00267 1087 aaKnown RBP39.36■■■■□ 3.89
CDC42EP4-203ENST00000578516 LAMC3Q9Y6N6 1575 aa39.33■■■■□ 3.89
CDC42EP4-203ENST00000578516 CCDC88BA6NC98 1476 aa39.29■■■■□ 3.88
CDC42EP4-203ENST00000578516 CADPSQ9ULU8 1353 aa39.2■■■■□ 3.87
CDC42EP4-203ENST00000578516 KIF21AQ7Z4S6 1674 aa39.18■■■■□ 3.86
CDC42EP4-203ENST00000578516 ERCC6Q03468 1493 aa39.17■■■■□ 3.86
CDC42EP4-203ENST00000578516 CFTRP13569 1480 aa39.05■■■■□ 3.84
CDC42EP4-203ENST00000578516 PRDM2Q13029 1718 aa39■■■■□ 3.83
CDC42EP4-203ENST00000578516 PDS5BQ9NTI5 1447 aa38.95■■■■□ 3.83
CDC42EP4-203ENST00000578516 THOC2Q8NI27 1593 aaKnown RBP38.93■■■■□ 3.82
CDC42EP4-203ENST00000578516 FANCD2Q9BXW9 1451 aa38.86■■■■□ 3.81
CDC42EP4-203ENST00000578516 CEP164Q9UPV0 1460 aa38.77■■■■□ 3.8
CDC42EP4-203ENST00000578516 MRC2Q9UBG0 1479 aa38.67■■■■□ 3.78
CDC42EP4-203ENST00000578516 CUX2O14529 1486 aa38.6■■■■□ 3.77
CDC42EP4-203ENST00000578516 WDR62O43379 1518 aa38.57■■■■□ 3.76
CDC42EP4-203ENST00000578516 URB2Q14146 1524 aaKnown RBP38.53■■■■□ 3.76
CDC42EP4-203ENST00000578516 TOPBP1Q92547 1522 aa38.29■■■■□ 3.72
CDC42EP4-203ENST00000578516 DNMBPQ6XZF7 1577 aa38.26■■■■□ 3.72
CDC42EP4-203ENST00000578516 CUX1P39880 1505 aa38.14■■■■□ 3.7
CDC42EP4-203ENST00000578516 ABCC8Q09428 1581 aa38.08■■■■□ 3.69
CDC42EP4-203ENST00000578516 POLA1P09884 1462 aaPredicted RBP37.97■■■■□ 3.67
CDC42EP4-203ENST00000578516 FGD5Q6ZNL6 1462 aa37.95■■■■□ 3.67
CDC42EP4-203ENST00000578516 SYNJ1O43426 1573 aa37.93■■■■□ 3.66
CDC42EP4-203ENST00000578516 TARBP1Q13395 1621 aaKnown RBP37.9■■■■□ 3.66
CDC42EP4-203ENST00000578516 IFT140Q96RY7 1462 aa37.89■■■■□ 3.66
CDC42EP4-203ENST00000578516 ZNF608Q9ULD9 1512 aaPredicted RBP37.87■■■■□ 3.65
CDC42EP4-203ENST00000578516 RAD54L2Q9Y4B4 1467 aa37.87■■■■□ 3.65
CDC42EP4-203ENST00000578516 BIVM-ERCC5R4GMW8 1640 aa37.86■■■■□ 3.65
CDC42EP4-203ENST00000578516 WRNQ14191 1432 aaPredicted RBP eCLIP37.86■■■■□ 3.65
CDC42EP4-203ENST00000578516 TOP2BQ02880 1626 aa37.81■■■■□ 3.64
CDC42EP4-203ENST00000578516 EIF4G3O43432 1585 aaKnown RBP37.76■■■■□ 3.63
CDC42EP4-203ENST00000578516 WDR97A6NE52 1622 aa37.73■■■■□ 3.63
CDC42EP4-203ENST00000578516 SOGA1O94964 1423 aa37.73■■■■□ 3.63
CDC42EP4-203ENST00000578516 AQRO60306 1485 aaKnown RBP eCLIP37.62■■■■□ 3.61
CDC42EP4-203ENST00000578516 TDRD9Q8NDG6 1382 aaKnown RBP37.56■■■■□ 3.6
CDC42EP4-203ENST00000578516 ABCA10Q8WWZ4 1543 aa37.5■■■■□ 3.59
CDC42EP4-203ENST00000578516 ABCA5Q8WWZ7 1642 aa37.46■■■■□ 3.59
CDC42EP4-203ENST00000578516 PBRM1Q86U86 1689 aa37.44■■■■□ 3.58
CDC42EP4-203ENST00000578516 GAPVD1Q14C86 1478 aa37.33■■■■□ 3.57
CDC42EP4-203ENST00000578516 CHD1O14646 1710 aa37.32■■■■□ 3.56
CDC42EP4-203ENST00000578516 SNAPC4Q5SXM2 1469 aa37.31■■■■□ 3.56
CDC42EP4-203ENST00000578516 GRIN2BQ13224 1484 aa37.27■■■■□ 3.56
CDC42EP4-203ENST00000578516 MAGI1Q96QZ7 1491 aaPredicted RBP37.13■■■■□ 3.54
CDC42EP4-203ENST00000578516 DNAJC5Q9H3Z4 198 aa37.13■■■■□ 3.53
CDC42EP4-203ENST00000578516 ADAMTS12P58397 1594 aa37.09■■■■□ 3.53
CDC42EP4-203ENST00000578516 FBLN2P98095 1184 aa37.06■■■■□ 3.52
CDC42EP4-203ENST00000578516 TRIM41Q8WV44 630 aa37.03■■■■□ 3.52
CDC42EP4-203ENST00000578516 ERICH3Q5RHP9 1530 aa37.03■■■■□ 3.52
CDC42EP4-203ENST00000578516 SYNJ2O15056 1496 aa37.01■■■■□ 3.52
CDC42EP4-203ENST00000578516 KIF27Q86VH2 1401 aa36.98■■■■□ 3.51
CDC42EP4-203ENST00000578516 RUSC2Q8N2Y8 1516 aa36.96■■■■□ 3.51
CDC42EP4-203ENST00000578516 OSCARQ8IYS5 282 aa36.96■■■■□ 3.51
CDC42EP4-203ENST00000578516 CHMP7Q8WUX9 453 aaPredicted RBP36.9■■■■□ 3.5
CDC42EP4-203ENST00000578516 FHAD1B1AJZ9 1412 aa36.86■■■■□ 3.49
CDC42EP4-203ENST00000578516 GRIN2AQ12879 1464 aa36.85■■■■□ 3.49
CDC42EP4-203ENST00000578516 IGF1RP08069 1367 aa36.83■■■■□ 3.49
CDC42EP4-203ENST00000578516 CUL7Q14999 1698 aa36.81■■■■□ 3.48
CDC42EP4-203ENST00000578516 CHIC1Q5VXU3 224 aa36.81■■■■□ 3.48
CDC42EP4-203ENST00000578516 CLASP1Q7Z460 1538 aa36.79■■■■□ 3.48
CDC42EP4-203ENST00000578516 CEP170Q5SW79 1584 aa36.78■■■■□ 3.48
CDC42EP4-203ENST00000578516 NUP160Q12769 1436 aa36.65■■■■□ 3.46
CDC42EP4-203ENST00000578516 RIMBP3CA6NJZ7 1639 aa36.63■■■■□ 3.45
CDC42EP4-203ENST00000578516 RIMBP3BA6NNM3 1639 aa36.63■■■■□ 3.45
CDC42EP4-203ENST00000578516 RIMBP3Q9UFD9 1639 aa36.63■■■■□ 3.45
CDC42EP4-203ENST00000578516 CARMIL1Q5VZK9 1371 aa36.61■■■■□ 3.45
CDC42EP4-203ENST00000578516 ARHGEF11O15085 1522 aa36.58■■■■□ 3.45
CDC42EP4-203ENST00000578516 FAM9AQ8IZU1 332 aaPredicted RBP36.45■■■■□ 3.43
CDC42EP4-203ENST00000578516 RAPGEF2Q9Y4G8 1499 aa36.44■■■■□ 3.42
CDC42EP4-203ENST00000578516 ERCC6L2Q5T890 1561 aa36.44■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms