RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 NISCHQ9Y2I1 1504 aa20.69■□□□□ 0.9
BPTF-211ENST00000578307 CCDC180Q9P1Z9 1646 aa17.86■□□□□ 0.45
BPTF-211ENST00000578307 CHIC1Q5VXU3 224 aa17.46■□□□□ 0.39
BPTF-211ENST00000578307 ZCCHC6Q5VYS8 1495 aaKnown RBP17.46■□□□□ 0.39
BPTF-211ENST00000578307 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
BPTF-211ENST00000578307 AEBP2Q6ZN18 517 aaPredicted RBP17.1■□□□□ 0.33
BPTF-211ENST00000578307 DCAF1Q9Y4B6 1507 aa17.08■□□□□ 0.32
BPTF-211ENST00000578307 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
BPTF-211ENST00000578307 SUPT5HO00267 1087 aaKnown RBP16.8■□□□□ 0.28
BPTF-211ENST00000578307 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
BPTF-211ENST00000578307 ABCC9O60706 1549 aa16.56■□□□□ 0.24
BPTF-211ENST00000578307 SCRIBQ14160 1630 aa16.53■□□□□ 0.24
BPTF-211ENST00000578307 NACADO15069 1562 aa16.52■□□□□ 0.24
BPTF-211ENST00000578307 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
BPTF-211ENST00000578307 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
BPTF-211ENST00000578307 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
BPTF-211ENST00000578307 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
BPTF-211ENST00000578307 UNC13AQ9UPW8 1703 aa16.04■□□□□ 0.16
BPTF-211ENST00000578307 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.15
BPTF-211ENST00000578307 BAZ1AQ9NRL2 1556 aaPredicted RBP15.96■□□□□ 0.14
BPTF-211ENST00000578307 WIZO95785 1651 aa15.94■□□□□ 0.14
BPTF-211ENST00000578307 MYT1Q01538 1121 aa15.89■□□□□ 0.13
BPTF-211ENST00000578307 SMARCA4P51532 1647 aa15.84■□□□□ 0.13
BPTF-211ENST00000578307 BICRAQ9NZM4 1560 aa15.8■□□□□ 0.12
BPTF-211ENST00000578307 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
BPTF-211ENST00000578307 TOP2AP11388 1531 aaKnown RBP15.75■□□□□ 0.11
BPTF-211ENST00000578307 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
BPTF-211ENST00000578307 LOC105371045A0A1W2PR82 267 aa15.67■□□□□ 0.1
BPTF-211ENST00000578307 PHF23Q9BUL5 403 aaPredicted RBP15.65■□□□□ 0.1
BPTF-211ENST00000578307 EIF4G1Q04637 1599 aaKnown RBP15.64■□□□□ 0.1
BPTF-211ENST00000578307 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
BPTF-211ENST00000578307 CCDC88BA6NC98 1476 aa15.6■□□□□ 0.09
BPTF-211ENST00000578307 PEG3Q9GZU2 1588 aa15.59■□□□□ 0.09
BPTF-211ENST00000578307 FAM9AQ8IZU1 332 aaPredicted RBP15.5■□□□□ 0.07
BPTF-211ENST00000578307 ATAD2BQ9ULI0 1458 aa15.46■□□□□ 0.06
BPTF-211ENST00000578307 ABCC8Q09428 1581 aa15.44■□□□□ 0.06
BPTF-211ENST00000578307 PCGF6Q9BYE7 350 aa15.42■□□□□ 0.06
BPTF-211ENST00000578307 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
BPTF-211ENST00000578307 EHMT2Q96KQ7 1210 aa15.31■□□□□ 0.04
BPTF-211ENST00000578307 TRIM26Q12899 539 aaPredicted RBP15.28■□□□□ 0.04
BPTF-211ENST00000578307 HRCP23327 699 aa15.28■□□□□ 0.04
BPTF-211ENST00000578307 WRNQ14191 1432 aaPredicted RBP eCLIP15.27■□□□□ 0.03
BPTF-211ENST00000578307 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
BPTF-211ENST00000578307 TTBK1Q5TCY1 1321 aaPredicted RBP15.25■□□□□ 0.03
BPTF-211ENST00000578307 EEA1Q15075 1411 aa15.25■□□□□ 0.03
BPTF-211ENST00000578307 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
BPTF-211ENST00000578307 SOGA1O94964 1423 aa15.22■□□□□ 0.03
BPTF-211ENST00000578307 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
BPTF-211ENST00000578307 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
BPTF-211ENST00000578307 RUSC2Q8N2Y8 1516 aa15.13■□□□□ 0.01
BPTF-211ENST00000578307 TNIKQ9UKE5 1360 aa15.09■□□□□ 0.01
BPTF-211ENST00000578307 TOP2BQ02880 1626 aa15.09■□□□□ 0.01
BPTF-211ENST00000578307 GOLGA3Q08378 1498 aa15.08■□□□□ 0
BPTF-211ENST00000578307 BIVM-ERCC5R4GMW8 1640 aa15.07■□□□□ 0
BPTF-211ENST00000578307 CEP162Q5TB80 1403 aa15.06■□□□□ 0
BPTF-211ENST00000578307 KIF21BO75037 1637 aa15.04■□□□□ -0
BPTF-211ENST00000578307 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
BPTF-211ENST00000578307 UBTFP17480 764 aaKnown RBP15.03■□□□□ -0
BPTF-211ENST00000578307 CFTRP13569 1480 aa15.03■□□□□ -0
BPTF-211ENST00000578307 PRDM2Q13029 1718 aa15.03■□□□□ -0
BPTF-211ENST00000578307 CC2D2AQ9P2K1 1620 aa14.99□□□□□ -0.01
BPTF-211ENST00000578307 CUX1P39880 1505 aa14.94□□□□□ -0.02
BPTF-211ENST00000578307 PPARGC1BQ86YN6 1023 aaKnown RBP14.94□□□□□ -0.02
BPTF-211ENST00000578307 CADPSQ9ULU8 1353 aa14.89□□□□□ -0.03
BPTF-211ENST00000578307 ZEB1P37275 1124 aaPredicted RBP14.89□□□□□ -0.03
BPTF-211ENST00000578307 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
BPTF-211ENST00000578307 ERICH3Q5RHP9 1530 aa14.86□□□□□ -0.03
BPTF-211ENST00000578307 CLIP1P30622 1438 aa14.85□□□□□ -0.03
BPTF-211ENST00000578307 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
BPTF-211ENST00000578307 PRXQ9BXM0 1461 aa14.82□□□□□ -0.04
BPTF-211ENST00000578307 VPS8Q8N3P4 1428 aa14.77□□□□□ -0.04
BPTF-211ENST00000578307 FANCD2Q9BXW9 1451 aa14.75□□□□□ -0.05
BPTF-211ENST00000578307 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
BPTF-211ENST00000578307 CUX2O14529 1486 aa14.72□□□□□ -0.05
BPTF-211ENST00000578307 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
BPTF-211ENST00000578307 APLP2Q06481 763 aa14.69□□□□□ -0.06
BPTF-211ENST00000578307 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
BPTF-211ENST00000578307 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
BPTF-211ENST00000578307 NESP48681 1621 aa14.66□□□□□ -0.06
BPTF-211ENST00000578307 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
BPTF-211ENST00000578307 IGF1RP08069 1367 aa14.65□□□□□ -0.06
BPTF-211ENST00000578307 ARAP1Q96P48 1450 aa14.65□□□□□ -0.06
BPTF-211ENST00000578307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
BPTF-211ENST00000578307 CCER1Q8TC90 406 aaPredicted RBP14.64□□□□□ -0.07
BPTF-211ENST00000578307 TOPBP1Q92547 1522 aa14.63□□□□□ -0.07
BPTF-211ENST00000578307 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
BPTF-211ENST00000578307 POLA1P09884 1462 aaPredicted RBP14.59□□□□□ -0.07
BPTF-211ENST00000578307 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
BPTF-211ENST00000578307 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
BPTF-211ENST00000578307 RAD54L2Q9Y4B4 1467 aa14.56□□□□□ -0.08
BPTF-211ENST00000578307 PDS5BQ9NTI5 1447 aa14.55□□□□□ -0.08
BPTF-211ENST00000578307 URB2Q14146 1524 aaKnown RBP14.53□□□□□ -0.08
BPTF-211ENST00000578307 PLPPR3Q6T4P5 718 aa14.53□□□□□ -0.08
BPTF-211ENST00000578307 CUL7Q14999 1698 aa14.53□□□□□ -0.08
BPTF-211ENST00000578307 WDR97A6NE52 1622 aa14.52□□□□□ -0.08
BPTF-211ENST00000578307 KIF21AQ7Z4S6 1674 aa14.51□□□□□ -0.09
BPTF-211ENST00000578307 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
BPTF-211ENST00000578307 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
BPTF-211ENST00000578307 CTTNBP2Q8WZ74 1663 aa14.46□□□□□ -0.1
BPTF-211ENST00000578307 KANK4Q5T7N3 995 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms