RNA–Protein interactions for RNA: ENST00000578103.1

TTC19-209, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TTC19, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-209ENST00000578103 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
TTC19-209ENST00000578103 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
TTC19-209ENST00000578103 NISCHQ9Y2I1 1504 aa15.08■□□□□ 0.01
TTC19-209ENST00000578103 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
TTC19-209ENST00000578103 CCDC180Q9P1Z9 1646 aa13.48□□□□□ -0.25
TTC19-209ENST00000578103 ABCC9O60706 1549 aa13.23□□□□□ -0.29
TTC19-209ENST00000578103 SENP3Q9H4L4 574 aaPredicted RBP13.04□□□□□ -0.32
TTC19-209ENST00000578103 PLPPR3Q6T4P5 718 aa12.99□□□□□ -0.33
TTC19-209ENST00000578103 RB1CC1Q8TDY2 1594 aa12.76□□□□□ -0.37
TTC19-209ENST00000578103 NACADO15069 1562 aa12.73□□□□□ -0.37
TTC19-209ENST00000578103 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
TTC19-209ENST00000578103 DCAF8L2P0C7V8 631 aa12.57□□□□□ -0.4
TTC19-209ENST00000578103 ZCCHC6Q5VYS8 1495 aaKnown RBP12.56□□□□□ -0.4
TTC19-209ENST00000578103 DCAF1Q9Y4B6 1507 aa12.55□□□□□ -0.4
TTC19-209ENST00000578103 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
TTC19-209ENST00000578103 PABPN1Q86U42 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
TTC19-209ENST00000578103 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
TTC19-209ENST00000578103 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
TTC19-209ENST00000578103 ADRA2BP18089 450 aa12.25□□□□□ -0.45
TTC19-209ENST00000578103 SCRIBQ14160 1630 aa12.22□□□□□ -0.45
TTC19-209ENST00000578103 DNAJC5BQ9UF47 199 aa12.19□□□□□ -0.46
TTC19-209ENST00000578103 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
TTC19-209ENST00000578103 FOXD1Q16676 465 aa12.1□□□□□ -0.47
TTC19-209ENST00000578103 EIF4G1Q04637 1599 aaKnown RBP12.02□□□□□ -0.49
TTC19-209ENST00000578103 KCNA4P22459 653 aa11.98□□□□□ -0.49
TTC19-209ENST00000578103 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
TTC19-209ENST00000578103 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
TTC19-209ENST00000578103 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
TTC19-209ENST00000578103 NCAPD3P42695 1498 aa11.75□□□□□ -0.53
TTC19-209ENST00000578103 BAZ1AQ9NRL2 1556 aaPredicted RBP11.73□□□□□ -0.53
TTC19-209ENST00000578103 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
TTC19-209ENST00000578103 SMARCA4P51532 1647 aa11.71□□□□□ -0.54
TTC19-209ENST00000578103 ATAD2BQ9ULI0 1458 aa11.7□□□□□ -0.54
TTC19-209ENST00000578103 HMGXB3Q12766 1538 aa11.68□□□□□ -0.54
TTC19-209ENST00000578103 PEG3Q9GZU2 1588 aa11.65□□□□□ -0.54
TTC19-209ENST00000578103 BAZ1BQ9UIG0 1483 aaKnown RBP11.61□□□□□ -0.55
TTC19-209ENST00000578103 MROH2BQ7Z745 1585 aa11.57□□□□□ -0.56
TTC19-209ENST00000578103 PPP4R3CPQ6ZMV5 832 aa11.55□□□□□ -0.56
TTC19-209ENST00000578103 PIAS4Q8N2W9 510 aaPredicted RBP11.55□□□□□ -0.56
TTC19-209ENST00000578103 ERCC6Q03468 1493 aa11.49□□□□□ -0.57
TTC19-209ENST00000578103 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
TTC19-209ENST00000578103 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
TTC19-209ENST00000578103 CUX2O14529 1486 aa11.44□□□□□ -0.58
TTC19-209ENST00000578103 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
TTC19-209ENST00000578103 CSRNP3Q8WYN3 585 aa11.43□□□□□ -0.58
TTC19-209ENST00000578103 PDS5BQ9NTI5 1447 aa11.41□□□□□ -0.58
TTC19-209ENST00000578103 WIZO95785 1651 aa11.4□□□□□ -0.59
TTC19-209ENST00000578103 CADPSQ9ULU8 1353 aa11.39□□□□□ -0.59
TTC19-209ENST00000578103 NESP48681 1621 aa11.38□□□□□ -0.59
TTC19-209ENST00000578103 TOP2AP11388 1531 aaKnown RBP11.37□□□□□ -0.59
TTC19-209ENST00000578103 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
TTC19-209ENST00000578103 CFTRP13569 1480 aa11.29□□□□□ -0.6
TTC19-209ENST00000578103 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
TTC19-209ENST00000578103 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
TTC19-209ENST00000578103 MRC2Q9UBG0 1479 aa11.26□□□□□ -0.61
TTC19-209ENST00000578103 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
TTC19-209ENST00000578103 FANCD2Q9BXW9 1451 aa11.24□□□□□ -0.61
TTC19-209ENST00000578103 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
TTC19-209ENST00000578103 WDR62O43379 1518 aa11.22□□□□□ -0.61
TTC19-209ENST00000578103 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
TTC19-209ENST00000578103 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
TTC19-209ENST00000578103 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
TTC19-209ENST00000578103 ABCC8Q09428 1581 aa11.11□□□□□ -0.63
TTC19-209ENST00000578103 URB2Q14146 1524 aaKnown RBP11.09□□□□□ -0.63
TTC19-209ENST00000578103 ZBTB22O15209 634 aa11.07□□□□□ -0.64
TTC19-209ENST00000578103 CNKSR2Q8WXI2 1034 aa11.07□□□□□ -0.64
TTC19-209ENST00000578103 IFT140Q96RY7 1462 aa11.04□□□□□ -0.64
TTC19-209ENST00000578103 TOPBP1Q92547 1522 aa11.03□□□□□ -0.64
TTC19-209ENST00000578103 DNMBPQ6XZF7 1577 aa11.03□□□□□ -0.64
TTC19-209ENST00000578103 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
TTC19-209ENST00000578103 SCAF1Q9H7N4 1312 aaKnown RBP10.97□□□□□ -0.65
TTC19-209ENST00000578103 POLA1P09884 1462 aaPredicted RBP10.93□□□□□ -0.66
TTC19-209ENST00000578103 WDR97A6NE52 1622 aa10.92□□□□□ -0.66
TTC19-209ENST00000578103 ZNF608Q9ULD9 1512 aaPredicted RBP10.91□□□□□ -0.66
TTC19-209ENST00000578103 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
TTC19-209ENST00000578103 TARBP1Q13395 1621 aaKnown RBP10.89□□□□□ -0.67
TTC19-209ENST00000578103 SOGA1O94964 1423 aa10.89□□□□□ -0.67
TTC19-209ENST00000578103 EIF4G3O43432 1585 aaKnown RBP10.89□□□□□ -0.67
TTC19-209ENST00000578103 CUX1P39880 1505 aa10.88□□□□□ -0.67
TTC19-209ENST00000578103 FGD5Q6ZNL6 1462 aa10.87□□□□□ -0.67
TTC19-209ENST00000578103 MSH5O43196 834 aa10.86□□□□□ -0.67
TTC19-209ENST00000578103 MAPK8IP2Q13387 824 aaPredicted RBP10.86□□□□□ -0.67
TTC19-209ENST00000578103 AQRO60306 1485 aaKnown RBP eCLIP10.84□□□□□ -0.67
TTC19-209ENST00000578103 RAD54L2Q9Y4B4 1467 aa10.83□□□□□ -0.68
TTC19-209ENST00000578103 WRNQ14191 1432 aaPredicted RBP eCLIP10.82□□□□□ -0.68
TTC19-209ENST00000578103 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
TTC19-209ENST00000578103 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
TTC19-209ENST00000578103 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
TTC19-209ENST00000578103 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
TTC19-209ENST00000578103 ABCA10Q8WWZ4 1543 aa10.8□□□□□ -0.68
TTC19-209ENST00000578103 TOP2BQ02880 1626 aa10.78□□□□□ -0.68
TTC19-209ENST00000578103 GAPVD1Q14C86 1478 aa10.77□□□□□ -0.69
TTC19-209ENST00000578103 SNAPC4Q5SXM2 1469 aa10.77□□□□□ -0.69
TTC19-209ENST00000578103 BIVM-ERCC5R4GMW8 1640 aa10.76□□□□□ -0.69
TTC19-209ENST00000578103 SYNJ2O15056 1496 aa10.75□□□□□ -0.69
TTC19-209ENST00000578103 FBLN2P98095 1184 aa10.74□□□□□ -0.69
TTC19-209ENST00000578103 CHMP7Q8WUX9 453 aaPredicted RBP10.74□□□□□ -0.69
TTC19-209ENST00000578103 ABCA5Q8WWZ7 1642 aa10.73□□□□□ -0.69
TTC19-209ENST00000578103 SYNJ1O43426 1573 aa10.72□□□□□ -0.69
TTC19-209ENST00000578103 CHD1O14646 1710 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms