RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
CDKN2A-211ENST00000577854 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
CDKN2A-211ENST00000577854 ABCC9O60706 1549 aa19.56■□□□□ 0.72
CDKN2A-211ENST00000577854 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
CDKN2A-211ENST00000577854 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
CDKN2A-211ENST00000577854 NACADO15069 1562 aa18.64■□□□□ 0.57
CDKN2A-211ENST00000577854 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
CDKN2A-211ENST00000577854 MYO15BQ96JP2 1530 aa18.43■□□□□ 0.54
CDKN2A-211ENST00000577854 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
CDKN2A-211ENST00000577854 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
CDKN2A-211ENST00000577854 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
CDKN2A-211ENST00000577854 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
CDKN2A-211ENST00000577854 BICRAQ9NZM4 1560 aa18.07■□□□□ 0.48
CDKN2A-211ENST00000577854 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
CDKN2A-211ENST00000577854 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
CDKN2A-211ENST00000577854 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
CDKN2A-211ENST00000577854 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
CDKN2A-211ENST00000577854 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
CDKN2A-211ENST00000577854 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
CDKN2A-211ENST00000577854 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
CDKN2A-211ENST00000577854 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
CDKN2A-211ENST00000577854 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
CDKN2A-211ENST00000577854 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
CDKN2A-211ENST00000577854 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
CDKN2A-211ENST00000577854 BAZ1BQ9UIG0 1483 aaKnown RBP17.14■□□□□ 0.33
CDKN2A-211ENST00000577854 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
CDKN2A-211ENST00000577854 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
CDKN2A-211ENST00000577854 WIZO95785 1651 aa16.98■□□□□ 0.31
CDKN2A-211ENST00000577854 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
CDKN2A-211ENST00000577854 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
CDKN2A-211ENST00000577854 NESP48681 1621 aa16.86■□□□□ 0.29
CDKN2A-211ENST00000577854 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
CDKN2A-211ENST00000577854 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
CDKN2A-211ENST00000577854 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
CDKN2A-211ENST00000577854 PDS5BQ9NTI5 1447 aa16.71■□□□□ 0.27
CDKN2A-211ENST00000577854 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
CDKN2A-211ENST00000577854 CUX2O14529 1486 aa16.63■□□□□ 0.25
CDKN2A-211ENST00000577854 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
CDKN2A-211ENST00000577854 KIF21AQ7Z4S6 1674 aa16.61■□□□□ 0.25
CDKN2A-211ENST00000577854 CFTRP13569 1480 aa16.59■□□□□ 0.25
CDKN2A-211ENST00000577854 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
CDKN2A-211ENST00000577854 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
CDKN2A-211ENST00000577854 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
CDKN2A-211ENST00000577854 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
CDKN2A-211ENST00000577854 WDR62O43379 1518 aa16.43■□□□□ 0.22
CDKN2A-211ENST00000577854 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
CDKN2A-211ENST00000577854 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
CDKN2A-211ENST00000577854 TOPBP1Q92547 1522 aa16.27■□□□□ 0.2
CDKN2A-211ENST00000577854 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
CDKN2A-211ENST00000577854 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
CDKN2A-211ENST00000577854 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.19
CDKN2A-211ENST00000577854 IFT140Q96RY7 1462 aa16.2■□□□□ 0.18
CDKN2A-211ENST00000577854 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
CDKN2A-211ENST00000577854 POLA1P09884 1462 aaPredicted RBP16.13■□□□□ 0.17
CDKN2A-211ENST00000577854 CUX1P39880 1505 aa16.12■□□□□ 0.17
CDKN2A-211ENST00000577854 SOGA1O94964 1423 aa16.11■□□□□ 0.17
CDKN2A-211ENST00000577854 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
CDKN2A-211ENST00000577854 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
CDKN2A-211ENST00000577854 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDKN2A-211ENST00000577854 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
CDKN2A-211ENST00000577854 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
CDKN2A-211ENST00000577854 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
CDKN2A-211ENST00000577854 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
CDKN2A-211ENST00000577854 FBLN2P98095 1184 aa16.02■□□□□ 0.16
CDKN2A-211ENST00000577854 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
CDKN2A-211ENST00000577854 SYNJ1O43426 1573 aa15.96■□□□□ 0.14
CDKN2A-211ENST00000577854 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
CDKN2A-211ENST00000577854 SNAPC4Q5SXM2 1469 aa15.92■□□□□ 0.14
CDKN2A-211ENST00000577854 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
CDKN2A-211ENST00000577854 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
CDKN2A-211ENST00000577854 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
CDKN2A-211ENST00000577854 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
CDKN2A-211ENST00000577854 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
CDKN2A-211ENST00000577854 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
CDKN2A-211ENST00000577854 MAGI1Q96QZ7 1491 aaPredicted RBP15.84■□□□□ 0.13
CDKN2A-211ENST00000577854 CHD1O14646 1710 aa15.83■□□□□ 0.13
CDKN2A-211ENST00000577854 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
CDKN2A-211ENST00000577854 ABCA5Q8WWZ7 1642 aa15.82■□□□□ 0.12
CDKN2A-211ENST00000577854 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
CDKN2A-211ENST00000577854 SYNJ2O15056 1496 aa15.79■□□□□ 0.12
CDKN2A-211ENST00000577854 KIF27Q86VH2 1401 aa15.72■□□□□ 0.11
CDKN2A-211ENST00000577854 ADAMTS12P58397 1594 aa15.71■□□□□ 0.11
CDKN2A-211ENST00000577854 FHAD1B1AJZ9 1412 aa15.71■□□□□ 0.11
CDKN2A-211ENST00000577854 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
CDKN2A-211ENST00000577854 ARHGEF11O15085 1522 aa15.7■□□□□ 0.1
CDKN2A-211ENST00000577854 RIMBP3CA6NJZ7 1639 aa15.69■□□□□ 0.1
CDKN2A-211ENST00000577854 RIMBP3BA6NNM3 1639 aa15.69■□□□□ 0.1
CDKN2A-211ENST00000577854 RIMBP3Q9UFD9 1639 aa15.69■□□□□ 0.1
CDKN2A-211ENST00000577854 GRIN2AQ12879 1464 aa15.69■□□□□ 0.1
CDKN2A-211ENST00000577854 CYB5RLQ6IPT4 315 aa15.65■□□□□ 0.1
CDKN2A-211ENST00000577854 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
CDKN2A-211ENST00000577854 IGF1RP08069 1367 aa15.62■□□□□ 0.09
CDKN2A-211ENST00000577854 CEP170Q5SW79 1584 aa15.59■□□□□ 0.09
CDKN2A-211ENST00000577854 NUP160Q12769 1436 aa15.59■□□□□ 0.09
CDKN2A-211ENST00000577854 CARMIL1Q5VZK9 1371 aa15.57■□□□□ 0.08
CDKN2A-211ENST00000577854 ARAP1Q96P48 1450 aa15.57■□□□□ 0.08
CDKN2A-211ENST00000577854 CUL7Q14999 1698 aa15.56■□□□□ 0.08
CDKN2A-211ENST00000577854 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
CDKN2A-211ENST00000577854 JPH4Q96JJ6 628 aa15.5■□□□□ 0.07
CDKN2A-211ENST00000577854 PRG4Q92954 1404 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms