RNA–Protein interactions for RNA: ENST00000577828.5

LINC00511-204, long intergenic non-protein coding RNA 511, humanhuman

TSL 3 BASIC

Gene LINC00511, Length 538 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-204ENST00000577828 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
LINC00511-204ENST00000577828 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
LINC00511-204ENST00000577828 ABCC9O60706 1549 aa20.55■□□□□ 0.88
LINC00511-204ENST00000577828 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
LINC00511-204ENST00000577828 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
LINC00511-204ENST00000577828 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
LINC00511-204ENST00000577828 NACADO15069 1562 aa19.83■□□□□ 0.77
LINC00511-204ENST00000577828 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
LINC00511-204ENST00000577828 RB1CC1Q8TDY2 1594 aa19.75■□□□□ 0.75
LINC00511-204ENST00000577828 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
LINC00511-204ENST00000577828 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
LINC00511-204ENST00000577828 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
LINC00511-204ENST00000577828 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
LINC00511-204ENST00000577828 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
LINC00511-204ENST00000577828 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
LINC00511-204ENST00000577828 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
LINC00511-204ENST00000577828 EIF4G1Q04637 1599 aaKnown RBP18.57■□□□□ 0.56
LINC00511-204ENST00000577828 CECR2Q9BXF3 1484 aa18.57■□□□□ 0.56
LINC00511-204ENST00000577828 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
LINC00511-204ENST00000577828 SMARCA4P51532 1647 aa18.52■□□□□ 0.55
LINC00511-204ENST00000577828 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
LINC00511-204ENST00000577828 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.53
LINC00511-204ENST00000577828 SMARCA2P51531 1590 aa18.37■□□□□ 0.53
LINC00511-204ENST00000577828 PEG3Q9GZU2 1588 aa18.37■□□□□ 0.53
LINC00511-204ENST00000577828 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
LINC00511-204ENST00000577828 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
LINC00511-204ENST00000577828 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
LINC00511-204ENST00000577828 WIZO95785 1651 aa18.24■□□□□ 0.51
LINC00511-204ENST00000577828 BAZ1BQ9UIG0 1483 aaKnown RBP18.21■□□□□ 0.51
LINC00511-204ENST00000577828 TOP2AP11388 1531 aaKnown RBP18.15■□□□□ 0.5
LINC00511-204ENST00000577828 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
LINC00511-204ENST00000577828 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
LINC00511-204ENST00000577828 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
LINC00511-204ENST00000577828 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
LINC00511-204ENST00000577828 CUX2O14529 1486 aa17.82■□□□□ 0.44
LINC00511-204ENST00000577828 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
LINC00511-204ENST00000577828 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
LINC00511-204ENST00000577828 CFTRP13569 1480 aa17.73■□□□□ 0.43
LINC00511-204ENST00000577828 PRDM2Q13029 1718 aa17.63■□□□□ 0.41
LINC00511-204ENST00000577828 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
LINC00511-204ENST00000577828 NESP48681 1621 aa17.61■□□□□ 0.41
LINC00511-204ENST00000577828 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
LINC00511-204ENST00000577828 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
LINC00511-204ENST00000577828 KIF21AQ7Z4S6 1674 aa17.45■□□□□ 0.38
LINC00511-204ENST00000577828 THOC2Q8NI27 1593 aaKnown RBP17.41■□□□□ 0.38
LINC00511-204ENST00000577828 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
LINC00511-204ENST00000577828 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
LINC00511-204ENST00000577828 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
LINC00511-204ENST00000577828 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
LINC00511-204ENST00000577828 WDR62O43379 1518 aa17.33■□□□□ 0.37
LINC00511-204ENST00000577828 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
LINC00511-204ENST00000577828 CUX1P39880 1505 aa17.29■□□□□ 0.36
LINC00511-204ENST00000577828 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
LINC00511-204ENST00000577828 TOP2BQ02880 1626 aa17.28■□□□□ 0.36
LINC00511-204ENST00000577828 BIVM-ERCC5R4GMW8 1640 aa17.27■□□□□ 0.36
LINC00511-204ENST00000577828 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
LINC00511-204ENST00000577828 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
LINC00511-204ENST00000577828 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
LINC00511-204ENST00000577828 POLA1P09884 1462 aaPredicted RBP17.18■□□□□ 0.34
LINC00511-204ENST00000577828 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
LINC00511-204ENST00000577828 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
LINC00511-204ENST00000577828 SOGA1O94964 1423 aa17.11■□□□□ 0.33
LINC00511-204ENST00000577828 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
LINC00511-204ENST00000577828 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
LINC00511-204ENST00000577828 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
LINC00511-204ENST00000577828 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
LINC00511-204ENST00000577828 RAD54L2Q9Y4B4 1467 aa17.04■□□□□ 0.32
LINC00511-204ENST00000577828 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
LINC00511-204ENST00000577828 EEA1Q15075 1411 aa16.96■□□□□ 0.31
LINC00511-204ENST00000577828 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
LINC00511-204ENST00000577828 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
LINC00511-204ENST00000577828 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
LINC00511-204ENST00000577828 ZNF608Q9ULD9 1512 aaPredicted RBP16.93■□□□□ 0.3
LINC00511-204ENST00000577828 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
LINC00511-204ENST00000577828 GRIN2BQ13224 1484 aa16.9■□□□□ 0.3
LINC00511-204ENST00000577828 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
LINC00511-204ENST00000577828 ERICH3Q5RHP9 1530 aa16.89■□□□□ 0.29
LINC00511-204ENST00000577828 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
LINC00511-204ENST00000577828 MAGI1Q96QZ7 1491 aaPredicted RBP16.83■□□□□ 0.28
LINC00511-204ENST00000577828 CUL7Q14999 1698 aa16.81■□□□□ 0.28
LINC00511-204ENST00000577828 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
LINC00511-204ENST00000577828 IGF1RP08069 1367 aa16.81■□□□□ 0.28
LINC00511-204ENST00000577828 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
LINC00511-204ENST00000577828 SNAPC4Q5SXM2 1469 aa16.79■□□□□ 0.28
LINC00511-204ENST00000577828 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
LINC00511-204ENST00000577828 ADAMTS12P58397 1594 aa16.77■□□□□ 0.27
LINC00511-204ENST00000577828 SYNJ2O15056 1496 aa16.74■□□□□ 0.27
LINC00511-204ENST00000577828 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
LINC00511-204ENST00000577828 CARMIL1Q5VZK9 1371 aa16.74■□□□□ 0.27
LINC00511-204ENST00000577828 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
LINC00511-204ENST00000577828 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
LINC00511-204ENST00000577828 KIF21BO75037 1637 aa16.7■□□□□ 0.26
LINC00511-204ENST00000577828 FBLN2P98095 1184 aa16.68■□□□□ 0.26
LINC00511-204ENST00000577828 CHMP7Q8WUX9 453 aaPredicted RBP16.68■□□□□ 0.26
LINC00511-204ENST00000577828 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
LINC00511-204ENST00000577828 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
LINC00511-204ENST00000577828 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
LINC00511-204ENST00000577828 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
LINC00511-204ENST00000577828 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
LINC00511-204ENST00000577828 GOLGA3Q08378 1498 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms